Your message dated Tue, 20 Aug 2019 11:20:33 +0000 with message-id <e1i02bl-0001ik...@fasolo.debian.org> and subject line Bug#925690: fixed in gatb-core 1.4.1+git20190813.a73b6dd+dfsg-1 has caused the Debian Bug report #925690, regarding gatb-core: ftbfs with GCC-9 to be marked as done.
This means that you claim that the problem has been dealt with. If this is not the case it is now your responsibility to reopen the Bug report if necessary, and/or fix the problem forthwith. (NB: If you are a system administrator and have no idea what this message is talking about, this may indicate a serious mail system misconfiguration somewhere. Please contact ow...@bugs.debian.org immediately.) -- 925690: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=925690 Debian Bug Tracking System Contact ow...@bugs.debian.org with problems
--- Begin Message ---Package: src:gatb-core Version: 1.4.1+git20181225.44d5a44+dfsg-2 Severity: normal Tags: sid bullseye User: debian-...@lists.debian.org Usertags: ftbfs-gcc-9 Please keep this issue open in the bug tracker for the package it was filed for. If a fix in another package is required, please file a bug for the other package (or clone), and add a block in this package. Please keep the issue open until the package can be built in a follow-up test rebuild. The package fails to build in a test rebuild on at least amd64 with gcc-9/g++-9, but succeeds to build with gcc-8/g++-8. The severity of this report will be raised before the bullseye release, so nothing has to be done for the buster release. The full build log can be found at: http://people.debian.org/~doko/logs/gcc9-20190321/gatb-core_1.4.1+git20181225.44d5a44+dfsg-2_unstable_gcc9.log The last lines of the build log are at the end of this report. To build with GCC 9, either set CC=gcc-9 CXX=g++-9 explicitly, or install the gcc, g++, gfortran, ... packages from experimental. apt-get -t=experimental install g++ Common build failures are new warnings resulting in build failures with -Werror turned on, or new/dropped symbols in Debian symbols files. For other C/C++ related build failures see the porting guide at http://gcc.gnu.org/gcc-9/porting_to.html GCC 9 also passes the linker option --as-needed by default; typical build issues are passing libraries before object files to the linker, or underlinking of convenience libraries built from the same source. 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_ZZN4gatb4core8debruijn4impl6bcalm2ILm128EEEvPNS0_5tools7storage4impl7StorageENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEiiiiibEN19InsertTravellerKmerclERKNS0_4bank8SequenceE@Base 1.4.1 _ZZN4gatb4core8debruijn4impl6bcalm2ILm128EEEvPNS0_5tools7storage4impl7StorageENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEiiiiibENKUliE1_clEi@Base 1.4.1 _ZZN4gatb4core8debruijn4impl6bcalm2ILm32EEEvPNS0_5tools7storage4impl7StorageENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEiiiiibEN19InsertTravellerKmerclERKNS0_4bank8SequenceE@Base 1.4.1 dh_makeshlibs: failing due to earlier errors make: *** [debian/rules:10: binary-arch] Error 2 dpkg-buildpackage: error: fakeroot debian/rules binary-arch subprocess returned exit status 2
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--- Begin Message ---Source: gatb-core Source-Version: 1.4.1+git20190813.a73b6dd+dfsg-1 We believe that the bug you reported is fixed in the latest version of gatb-core, which is due to be installed in the Debian FTP archive. A summary of the changes between this version and the previous one is attached. Thank you for reporting the bug, which will now be closed. If you have further comments please address them to 925...@bugs.debian.org, and the maintainer will reopen the bug report if appropriate. Debian distribution maintenance software pp. Andreas Tille <ti...@debian.org> (supplier of updated gatb-core package) (This message was generated automatically at their request; if you believe that there is a problem with it please contact the archive administrators by mailing ftpmas...@ftp-master.debian.org) -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 1.8 Date: Tue, 20 Aug 2019 12:51:53 +0200 Source: gatb-core Architecture: source Version: 1.4.1+git20190813.a73b6dd+dfsg-1 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team <debian-med-packag...@lists.alioth.debian.org> Changed-By: Andreas Tille <ti...@debian.org> Closes: 925690 931403 Changes: gatb-core (1.4.1+git20190813.a73b6dd+dfsg-1) unstable; urgency=medium . * New upstream version * debhelper-compat 12 * Standards-Version: 4.4.0 * Fix symbols file to match output from gcc9 Closes: #925690 * List missing dependencies explicitly Closes: #931403 Checksums-Sha1: 3ec28f1f14ad3515fbd4e60d44a7fa737c40e150 2457 gatb-core_1.4.1+git20190813.a73b6dd+dfsg-1.dsc 66c10d75f217662b2b087549035f211f9e54d94c 2943932 gatb-core_1.4.1+git20190813.a73b6dd+dfsg.orig.tar.xz 7308f531cd7893030982bddfe7931b9fbb4546ba 97956 gatb-core_1.4.1+git20190813.a73b6dd+dfsg-1.debian.tar.xz 2b303078eb201a2291a5745442bec8207ca900ec 10450 gatb-core_1.4.1+git20190813.a73b6dd+dfsg-1_amd64.buildinfo Checksums-Sha256: 170f2ecde1bdc8f898ab64501c5d0ecd948cd25ab95235fa75a84e4cdad05495 2457 gatb-core_1.4.1+git20190813.a73b6dd+dfsg-1.dsc 5a537006b1b0b7e4c04c47a78a316e4dfa0fcdb51069403c4bdaf3f9538fc892 2943932 gatb-core_1.4.1+git20190813.a73b6dd+dfsg.orig.tar.xz 8849c85dbf4b83736a48de6c1cf2b8a5a79b708398db85bbb33f7cbdbfbb9ede 97956 gatb-core_1.4.1+git20190813.a73b6dd+dfsg-1.debian.tar.xz af55f332b5502f3d585e284e7ab7efe2ea715cf15940cdf89162e4eafcf51c88 10450 gatb-core_1.4.1+git20190813.a73b6dd+dfsg-1_amd64.buildinfo Files: 5af213e63afb02ddb57f1315fe1e71ab 2457 science optional gatb-core_1.4.1+git20190813.a73b6dd+dfsg-1.dsc f90d7f2dc1ff5ae16af1f14b597b5000 2943932 science optional gatb-core_1.4.1+git20190813.a73b6dd+dfsg.orig.tar.xz 7c1a2193c51db6163a1eadc0eb1063b8 97956 science optional gatb-core_1.4.1+git20190813.a73b6dd+dfsg-1.debian.tar.xz ea2d0fc7ccd880ed2fecbe1e5f2dbcf5 10450 science optional gatb-core_1.4.1+git20190813.a73b6dd+dfsg-1_amd64.buildinfo -----BEGIN PGP SIGNATURE----- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAl1b1EMRHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtGs8g/9HCGoylX9Fh8bEQ2dCwfvglUG7T622Fng H2t6x5dktg7pTBZpBgWz9G1+d/UhrlUoa69dap6kkptU+w79o6uGyyaiwmK9bmiu 8jIwIqHFkuuRb/Q0q1sHSDDxeni8HWIPX7cJkHD4gXCGnmaq2wyizzQsyjajAJFy eZB9rmPK0gQ12+JZaRIR3+SWsIItTxwZaIqfunGkOgW2av90haL7FRyWOwV5ARcr AZVBqpViCdQOkeaycz6iJ1cQ+8zFiGyyomcj8EhHkQu2+nQ+dRGS2b0pR35EtNPj EanZTy5CJot8413HL+kzFiJ4jYB1dAN7P7Fyr0eeeriqU3fpAW4XK9efrnCbI8Gs nbT1QrY1TE2tyTkuVlKw+7Gmc/lHAtXlfZSWoNtMhs4fsgS7o5xaY8XKvwMa44NT Z8StAOjWsgoF7f+mbu29RenrB/dZ7PaRH/j7yyuGbu1FGlKf+Mx+yKVCp9T8+bu6 BWnMUj8IVXU4qZuPNuWlmbPNbXz+6Z1dhOxzeD2rWyupNREr1aui6u+iexVjGZHb JXtoX5qE+9q3MuLFHlTM4m/70F869n66WRZC6YYmm786EnJgTToY2P2H7xqbS+jz UvV87SoFjhZXf+LjlyBsKj1v3n0/zguiz+3uzaCTMnFY0hm4l7klK4TdJHMNx8cy eeSUiko2Xok= =rZ1q -----END PGP SIGNATURE-----
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