Your message dated Thu, 08 Aug 2019 10:08:52 +0000 with message-id <e1hvflo-0006vl...@fasolo.debian.org> and subject line Bug#933937: fixed in biobambam2 2.0.129-1 has caused the Debian Bug report #933937, regarding biobambam2: /usr/bin/fastaexplode is already provided by exonerate to be marked as done.
This means that you claim that the problem has been dealt with. If this is not the case it is now your responsibility to reopen the Bug report if necessary, and/or fix the problem forthwith. (NB: If you are a system administrator and have no idea what this message is talking about, this may indicate a serious mail system misconfiguration somewhere. Please contact ow...@bugs.debian.org immediately.) -- 933937: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=933937 Debian Bug Tracking System Contact ow...@bugs.debian.org with problems
--- Begin Message ---Package: biobambam2 Version: 2.0.95-1 Severity: serious User: debian...@lists.debian.org Usertags: piuparts Hi, during a test with piuparts I noticed your package failed to install because it tries to overwrite other packages files. >From the attached log (scroll to the bottom...): Selecting previously unselected package biobambam2. Preparing to unpack .../biobambam2_2.0.95-1_amd64.deb ... Unpacking biobambam2 (2.0.95-1) ... dpkg: error processing archive /var/cache/apt/archives/biobambam2_2.0.95-1_amd64.deb (--unpack): trying to overwrite '/usr/bin/fastaexplode', which is also in package exonerate 2.4.0-4 Errors were encountered while processing: /var/cache/apt/archives/biobambam2_2.0.95-1_amd64.deb cheers, Andreas
exonerate=2.4.0-4_biobambam2=2.0.95-1.log.gz
Description: application/gzip
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--- Begin Message ---Source: biobambam2 Source-Version: 2.0.129-1 We believe that the bug you reported is fixed in the latest version of biobambam2, which is due to be installed in the Debian FTP archive. A summary of the changes between this version and the previous one is attached. Thank you for reporting the bug, which will now be closed. If you have further comments please address them to 933...@bugs.debian.org, and the maintainer will reopen the bug report if appropriate. Debian distribution maintenance software pp. Andreas Tille <ti...@debian.org> (supplier of updated biobambam2 package) (This message was generated automatically at their request; if you believe that there is a problem with it please contact the archive administrators by mailing ftpmas...@ftp-master.debian.org) -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 1.8 Date: Thu, 08 Aug 2019 10:38:37 +0200 Source: biobambam2 Binary: biobambam2 Architecture: source Version: 2.0.129-1 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team <debian-med-packag...@lists.alioth.debian.org> Changed-By: Andreas Tille <ti...@debian.org> Description: biobambam2 - tools for early stage alignment file processing Closes: 933937 Changes: biobambam2 (2.0.129-1) unstable; urgency=medium . * New upstream version * Upstream has renamed fastaexplode to fastaexplod Closes: #933937 Checksums-Sha1: 55df6f388d8f816ea354503f6f5e59d9a1b835a1 2025 biobambam2_2.0.129-1.dsc 489ccc5dd15748f40d0cec5b3a16ac459f1b299f 853403 biobambam2_2.0.129.orig.tar.bz2 f4ce95e9126e4f846ddbf57b5f43d7f8d073831d 2880 biobambam2_2.0.129-1.debian.tar.xz Checksums-Sha256: cb9cdf1cb5fae379a373b26805088c64b59638c7ebd37315ee8adc04e80a1a13 2025 biobambam2_2.0.129-1.dsc 0c0b7e409f5e409097c78d2dadc3a396286ba6a8790082477c3da4a2d5e89682 853403 biobambam2_2.0.129.orig.tar.bz2 b1d25137fe8122a543121ca33bce62057f0a22bf0af466ab86fe9cf814da3147 2880 biobambam2_2.0.129-1.debian.tar.xz Files: cb07d9532dfd6db0c513848613b8f9a8 2025 science optional biobambam2_2.0.129-1.dsc 21c5fbe5aa279f40b459fa0d567b8b9a 853403 science optional biobambam2_2.0.129.orig.tar.bz2 5da737215d96795739870ccc6e8df5eb 2880 science optional biobambam2_2.0.129-1.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAl1L63QRHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtHUFA//TgaOVceVMOv5IE92bIGRgUCK/CHfO855 pxWIvAxFQoenrU1sv9S4nGzP7K6n3LyOhcjQFmfygcQ1ZO5nBFDJq6yznDJkdlfF Hxb/oEe8zumIJZ4sE750WfsV0lES7a1hGx+d5W8T3ieVXrHtH5aBdubAxsoLyOQD fVQdXfh9dmfygaWm54A8YLYohd9nkXg7kf8D5r7rgPTzZ/uUK62h9S4DCZ+Tf517 6zNlQl3+fITiWvpZPG+T5UtrBchD7oHSLNB0TePThZChRTML7kwEXBVn9MaTSddG 1H773OQ9hKOIUQa7p4lwMp2rgdIk2r+Lw/RszBkeGSgAs5wBdhD+owu0H3+gCnnF +GBIGkn3r5SKqpLKjf44B3do4ds7eo3anFeH+9+8zMqx/IrKEyPIxPUD2P8K9o7Y Kmmj9fCus8q9Pz247nu9pbnXn3rZB1ubM0vmqhuNFG8CtKtzRjrf94Tm8FteXb64 APFLSVNbCRtpwUjNWL3L/kD8rR75XOmCLk4FNiMdCQlLk9vlj8EKDm+hVQYX18DC llkJ+0ZdvR+lpcjKNy4irW/BsIYtItDHYcGhQbnD1p8+2utaorH2qGioCKYs4fUf 1IBNhNQYZU0Xmif3yvPKHVcc5uUyJBsqtDTc3QmRhN6weJK7uXTwFGrEjSZiSfhS QSZO509q+Zc= =ajqG -----END PGP SIGNATURE-----
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