Your message dated Wed, 13 Mar 2019 13:49:02 +0000
with message-id <e1h44fi-0006mm...@fasolo.debian.org>
and subject line Bug#924472: fixed in beads 1.1.18+dfsg-3
has caused the Debian Bug report #924472,
regarding beads: FTBFS (quazip5/quazip.h: No such file or directory)
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)
--
924472: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=924472
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Package: src:beads
Version: 1.1.18+dfsg-2
Severity: serious
Tags: ftbfs
Dear maintainer:
I tried to build this package in buster but it failed:
--------------------------------------------------------------------------------
[...]
debian/rules build-arch
dh build-arch
dh_update_autotools_config -a
dh_autoreconf -a
debian/rules override_dh_auto_configure
make[1]: Entering directory '/<<BUILDDIR>>/beads-1.1.18+dfsg'
dh_auto_configure -- -DQ_OS_X11=ON
cd obj-x86_64-linux-gnu && cmake -DCMAKE_INSTALL_PREFIX=/usr
-DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc
-DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON
-DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run
"-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON
-DCMAKE_INSTALL_LIBDIR=lib/x86_64-linux-gnu -DQ_OS_X11=ON ..
-- The CXX compiler identification is GNU 8.3.0
-- The C compiler identification is GNU 8.3.0
-- Check for working CXX compiler: /usr/bin/c++
-- Check for working CXX compiler: /usr/bin/c++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
[... snipped ...]
cd /<<BUILDDIR>>/beads-1.1.18+dfsg/obj-x86_64-linux-gnu/src && /usr/bin/c++
-DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_XML_LIB -I/usr/include/odsstream
-I/<<BUILDDIR>>/beads-1.1.18+dfsg/src/cimg -I/usr/include/x86_64-linux-gnu
-I/usr/lib/x86_64-linux-gnu -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem
/usr/include/x86_64-linux-gnu/qt5/QtCore -isystem
/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem
/usr/include/x86_64-linux-gnu/qt5/QtGui -isystem
/usr/include/x86_64-linux-gnu/qt5/QtXml -g -O2
-fdebug-prefix-map=/<<BUILDDIR>>/beads-1.1.18+dfsg=. -fstack-protector-strong
-Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11
-Dcimg_use_tiff -Dcimg_use_jpeg -Dcimg_use_zlib -Dcimg_use_png
-Dcimg_use_tiff -Dcimg_use_jpeg -Dcimg_use_zlib -Dcimg_use_png -fPIC
-std=gnu++11 -o CMakeFiles/cppbeads.dir/images/imageNumber.cpp.o -c
/<<BUILDDIR>>/beads-1.1.18+dfsg/src/images/imageNumber.cpp
[ 43%] Building CXX object
src/CMakeFiles/cppbeads.dir/images/parameterNumber.cpp.o
cd /<<BUILDDIR>>/beads-1.1.18+dfsg/obj-x86_64-linux-gnu/src && /usr/bin/c++
-DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_XML_LIB -I/usr/include/odsstream
-I/<<BUILDDIR>>/beads-1.1.18+dfsg/src/cimg -I/usr/include/x86_64-linux-gnu
-I/usr/lib/x86_64-linux-gnu -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem
/usr/include/x86_64-linux-gnu/qt5/QtCore -isystem
/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem
/usr/include/x86_64-linux-gnu/qt5/QtGui -isystem
/usr/include/x86_64-linux-gnu/qt5/QtXml -g -O2
-fdebug-prefix-map=/<<BUILDDIR>>/beads-1.1.18+dfsg=. -fstack-protector-strong
-Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11
-Dcimg_use_tiff -Dcimg_use_jpeg -Dcimg_use_zlib -Dcimg_use_png
-Dcimg_use_tiff -Dcimg_use_jpeg -Dcimg_use_zlib -Dcimg_use_png -fPIC
-std=gnu++11 -o CMakeFiles/cppbeads.dir/images/parameterNumber.cpp.o -c
/<<BUILDDIR>>/beads-1.1.18+dfsg/src/images/parameterNumber.cpp
[ 45%] Building CXX object
src/CMakeFiles/cppbeads.dir/images/imageContours.cpp.o
cd /<<BUILDDIR>>/beads-1.1.18+dfsg/obj-x86_64-linux-gnu/src && /usr/bin/c++
-DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_XML_LIB -I/usr/include/odsstream
-I/<<BUILDDIR>>/beads-1.1.18+dfsg/src/cimg -I/usr/include/x86_64-linux-gnu
-I/usr/lib/x86_64-linux-gnu -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem
/usr/include/x86_64-linux-gnu/qt5/QtCore -isystem
/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem
/usr/include/x86_64-linux-gnu/qt5/QtGui -isystem
/usr/include/x86_64-linux-gnu/qt5/QtXml -g -O2
-fdebug-prefix-map=/<<BUILDDIR>>/beads-1.1.18+dfsg=. -fstack-protector-strong
-Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11
-Dcimg_use_tiff -Dcimg_use_jpeg -Dcimg_use_zlib -Dcimg_use_png
-Dcimg_use_tiff -Dcimg_use_jpeg -Dcimg_use_zlib -Dcimg_use_png -fPIC
-std=gnu++11 -o CMakeFiles/cppbeads.dir/images/imageContours.cpp.o -c
/<<BUILDDIR>>/beads-1.1.18+dfsg/src/images/imageContours.cpp
[ 48%] Building CXX object
src/CMakeFiles/cppbeads.dir/spotPROTICdbDocument.cpp.o
cd /<<BUILDDIR>>/beads-1.1.18+dfsg/obj-x86_64-linux-gnu/src && /usr/bin/c++
-DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_XML_LIB -I/usr/include/odsstream
-I/<<BUILDDIR>>/beads-1.1.18+dfsg/src/cimg -I/usr/include/x86_64-linux-gnu
-I/usr/lib/x86_64-linux-gnu -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem
/usr/include/x86_64-linux-gnu/qt5/QtCore -isystem
/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem
/usr/include/x86_64-linux-gnu/qt5/QtGui -isystem
/usr/include/x86_64-linux-gnu/qt5/QtXml -g -O2
-fdebug-prefix-map=/<<BUILDDIR>>/beads-1.1.18+dfsg=. -fstack-protector-strong
-Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11
-Dcimg_use_tiff -Dcimg_use_jpeg -Dcimg_use_zlib -Dcimg_use_png
-Dcimg_use_tiff -Dcimg_use_jpeg -Dcimg_use_zlib -Dcimg_use_png -fPIC
-std=gnu++11 -o CMakeFiles/cppbeads.dir/spotPROTICdbDocument.cpp.o -c
/<<BUILDDIR>>/beads-1.1.18+dfsg/src/spotPROTICdbDocument.cpp
[ 51%] Building CXX object src/CMakeFiles/cppbeads.dir/spot.cpp.o
cd /<<BUILDDIR>>/beads-1.1.18+dfsg/obj-x86_64-linux-gnu/src && /usr/bin/c++
-DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_XML_LIB -I/usr/include/odsstream
-I/<<BUILDDIR>>/beads-1.1.18+dfsg/src/cimg -I/usr/include/x86_64-linux-gnu
-I/usr/lib/x86_64-linux-gnu -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem
/usr/include/x86_64-linux-gnu/qt5/QtCore -isystem
/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem
/usr/include/x86_64-linux-gnu/qt5/QtGui -isystem
/usr/include/x86_64-linux-gnu/qt5/QtXml -g -O2
-fdebug-prefix-map=/<<BUILDDIR>>/beads-1.1.18+dfsg=. -fstack-protector-strong
-Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11
-Dcimg_use_tiff -Dcimg_use_jpeg -Dcimg_use_zlib -Dcimg_use_png
-Dcimg_use_tiff -Dcimg_use_jpeg -Dcimg_use_zlib -Dcimg_use_png -fPIC
-std=gnu++11 -o CMakeFiles/cppbeads.dir/spot.cpp.o -c
/<<BUILDDIR>>/beads-1.1.18+dfsg/src/spot.cpp
[ 54%] Building CXX object src/CMakeFiles/cppbeads.dir/spotDocument.cpp.o
cd /<<BUILDDIR>>/beads-1.1.18+dfsg/obj-x86_64-linux-gnu/src && /usr/bin/c++
-DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_XML_LIB -I/usr/include/odsstream
-I/<<BUILDDIR>>/beads-1.1.18+dfsg/src/cimg -I/usr/include/x86_64-linux-gnu
-I/usr/lib/x86_64-linux-gnu -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem
/usr/include/x86_64-linux-gnu/qt5/QtCore -isystem
/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem
/usr/include/x86_64-linux-gnu/qt5/QtGui -isystem
/usr/include/x86_64-linux-gnu/qt5/QtXml -g -O2
-fdebug-prefix-map=/<<BUILDDIR>>/beads-1.1.18+dfsg=. -fstack-protector-strong
-Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11
-Dcimg_use_tiff -Dcimg_use_jpeg -Dcimg_use_zlib -Dcimg_use_png
-Dcimg_use_tiff -Dcimg_use_jpeg -Dcimg_use_zlib -Dcimg_use_png -fPIC
-std=gnu++11 -o CMakeFiles/cppbeads.dir/spotDocument.cpp.o -c
/<<BUILDDIR>>/beads-1.1.18+dfsg/src/spotDocument.cpp
[ 56%] Building CXX object src/CMakeFiles/cppbeads.dir/spotSvgDocument.cpp.o
cd /<<BUILDDIR>>/beads-1.1.18+dfsg/obj-x86_64-linux-gnu/src && /usr/bin/c++
-DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_XML_LIB -I/usr/include/odsstream
-I/<<BUILDDIR>>/beads-1.1.18+dfsg/src/cimg -I/usr/include/x86_64-linux-gnu
-I/usr/lib/x86_64-linux-gnu -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem
/usr/include/x86_64-linux-gnu/qt5/QtCore -isystem
/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem
/usr/include/x86_64-linux-gnu/qt5/QtGui -isystem
/usr/include/x86_64-linux-gnu/qt5/QtXml -g -O2
-fdebug-prefix-map=/<<BUILDDIR>>/beads-1.1.18+dfsg=. -fstack-protector-strong
-Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11
-Dcimg_use_tiff -Dcimg_use_jpeg -Dcimg_use_zlib -Dcimg_use_png
-Dcimg_use_tiff -Dcimg_use_jpeg -Dcimg_use_zlib -Dcimg_use_png -fPIC
-std=gnu++11 -o CMakeFiles/cppbeads.dir/spotSvgDocument.cpp.o -c
/<<BUILDDIR>>/beads-1.1.18+dfsg/src/spotSvgDocument.cpp
[ 59%] Building CXX object src/CMakeFiles/cppbeads.dir/images/imageDeNovo.cpp.o
cd /<<BUILDDIR>>/beads-1.1.18+dfsg/obj-x86_64-linux-gnu/src && /usr/bin/c++
-DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_XML_LIB -I/usr/include/odsstream
-I/<<BUILDDIR>>/beads-1.1.18+dfsg/src/cimg -I/usr/include/x86_64-linux-gnu
-I/usr/lib/x86_64-linux-gnu -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem
/usr/include/x86_64-linux-gnu/qt5/QtCore -isystem
/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem
/usr/include/x86_64-linux-gnu/qt5/QtGui -isystem
/usr/include/x86_64-linux-gnu/qt5/QtXml -g -O2
-fdebug-prefix-map=/<<BUILDDIR>>/beads-1.1.18+dfsg=. -fstack-protector-strong
-Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11
-Dcimg_use_tiff -Dcimg_use_jpeg -Dcimg_use_zlib -Dcimg_use_png
-Dcimg_use_tiff -Dcimg_use_jpeg -Dcimg_use_zlib -Dcimg_use_png -fPIC
-std=gnu++11 -o CMakeFiles/cppbeads.dir/images/imageDeNovo.cpp.o -c
/<<BUILDDIR>>/beads-1.1.18+dfsg/src/images/imageDeNovo.cpp
[ 62%] Linking CXX static library libcppbeads-qt5.a
cd /<<BUILDDIR>>/beads-1.1.18+dfsg/obj-x86_64-linux-gnu/src && /usr/bin/cmake
-P CMakeFiles/cppbeads.dir/cmake_clean_target.cmake
cd /<<BUILDDIR>>/beads-1.1.18+dfsg/obj-x86_64-linux-gnu/src && /usr/bin/cmake
-E cmake_link_script CMakeFiles/cppbeads.dir/link.txt --verbose=1
/usr/bin/ar qc libcppbeads-qt5.a
CMakeFiles/cppbeads.dir/ConfigFile/ConfigFile.cpp.o
CMakeFiles/cppbeads.dir/parameters.cpp.o
CMakeFiles/cppbeads.dir/encode/base64.cpp.o
CMakeFiles/cppbeads.dir/images/imageIntensity.cpp.o
CMakeFiles/cppbeads.dir/images/imageDirect.cpp.o
CMakeFiles/cppbeads.dir/images/imageCoule.cpp.o
CMakeFiles/cppbeads.dir/images/imagePaths.cpp.o
CMakeFiles/cppbeads.dir/images/imageConfluent.cpp.o
CMakeFiles/cppbeads.dir/images/imageProb.cpp.o
CMakeFiles/cppbeads.dir/images/parameterProb.cpp.o
CMakeFiles/cppbeads.dir/parameterDetection.cpp.o
CMakeFiles/cppbeads.dir/images/parameterConfluent.cpp.o
CMakeFiles/cppbeads.dir/detection.cpp.o
CMakeFiles/cppbeads.dir/images/imageDetection.cpp.o
CMakeFiles/cppbeads.dir/images/imageNumber.cpp.o
CMakeFiles/cppbeads.dir/images/parameterNumber.cpp.o
CMakeFiles/cppbeads.dir/images/imageContours.cpp.o
CMakeFiles/cppbeads.dir/spotPROTICdbDocument.cpp.o
CMakeFiles/cppbeads.dir/spot.cpp.o CMakeFiles/cppbeads.dir/spotDocument.cpp.o C
MakeFiles/cppbeads.dir/spotSvgDocument.cpp.o
CMakeFiles/cppbeads.dir/images/imageDeNovo.cpp.o
/usr/bin/ranlib libcppbeads-qt5.a
make[3]: Leaving directory
'/<<BUILDDIR>>/beads-1.1.18+dfsg/obj-x86_64-linux-gnu'
[ 62%] Built target cppbeads
make -f src/CMakeFiles/beads.dir/build.make src/CMakeFiles/beads.dir/depend
make[3]: Entering directory
'/<<BUILDDIR>>/beads-1.1.18+dfsg/obj-x86_64-linux-gnu'
cd /<<BUILDDIR>>/beads-1.1.18+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E
cmake_depends "Unix Makefiles" /<<BUILDDIR>>/beads-1.1.18+dfsg
/<<BUILDDIR>>/beads-1.1.18+dfsg/src
/<<BUILDDIR>>/beads-1.1.18+dfsg/obj-x86_64-linux-gnu
/<<BUILDDIR>>/beads-1.1.18+dfsg/obj-x86_64-linux-gnu/src
/<<BUILDDIR>>/beads-1.1.18+dfsg/obj-x86_64-linux-gnu/src/CMakeFiles/beads.dir/DependInfo.cmake
--color=
Scanning dependencies of target beads
make[3]: Leaving directory
'/<<BUILDDIR>>/beads-1.1.18+dfsg/obj-x86_64-linux-gnu'
make -f src/CMakeFiles/beads.dir/build.make src/CMakeFiles/beads.dir/build
make[3]: Entering directory
'/<<BUILDDIR>>/beads-1.1.18+dfsg/obj-x86_64-linux-gnu'
[ 64%] Building CXX object src/CMakeFiles/beads.dir/beads.cpp.o
cd /<<BUILDDIR>>/beads-1.1.18+dfsg/obj-x86_64-linux-gnu/src && /usr/bin/c++
-DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_XML_LIB -I/usr/include/odsstream
-I/<<BUILDDIR>>/beads-1.1.18+dfsg/src/cimg -I/usr/include/x86_64-linux-gnu
-I/usr/lib/x86_64-linux-gnu -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem
/usr/include/x86_64-linux-gnu/qt5/QtCore -isystem
/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem
/usr/include/x86_64-linux-gnu/qt5/QtGui -isystem
/usr/include/x86_64-linux-gnu/qt5/QtXml -g -O2
-fdebug-prefix-map=/<<BUILDDIR>>/beads-1.1.18+dfsg=. -fstack-protector-strong
-Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11
-Dcimg_use_tiff -Dcimg_use_jpeg -Dcimg_use_zlib -Dcimg_use_png
-Dcimg_use_tiff -Dcimg_use_jpeg -Dcimg_use_zlib -Dcimg_use_png -fPIC
-std=gnu++11 -o CMakeFiles/beads.dir/beads.cpp.o -c
/<<BUILDDIR>>/beads-1.1.18+dfsg/src/beads.cpp
In file included from /<<BUILDDIR>>/beads-1.1.18+dfsg/src/beads.cpp:22:
/usr/include/odsstream/odsdocwriter.h:27:10: fatal error: quazip5/quazip.h: No
such file or directory
#include <quazip5/quazip.h>
^~~~~~~~~~~~~~~~~~
compilation terminated.
make[3]: *** [src/CMakeFiles/beads.dir/build.make:66:
src/CMakeFiles/beads.dir/beads.cpp.o] Error 1
make[3]: Leaving directory
'/<<BUILDDIR>>/beads-1.1.18+dfsg/obj-x86_64-linux-gnu'
make[2]: *** [CMakeFiles/Makefile2:162: src/CMakeFiles/beads.dir/all] Error 2
make[2]: Leaving directory
'/<<BUILDDIR>>/beads-1.1.18+dfsg/obj-x86_64-linux-gnu'
make[1]: *** [Makefile:155: all] Error 2
make[1]: Leaving directory
'/<<BUILDDIR>>/beads-1.1.18+dfsg/obj-x86_64-linux-gnu'
dh_auto_build: cd obj-x86_64-linux-gnu && make -j1 "INSTALL=install
--strip-program=true" returned exit code 2
make: *** [debian/rules:11: build-arch] Error 2
dpkg-buildpackage: error: debian/rules build-arch subprocess returned exit
status 2
--------------------------------------------------------------------------------
(The above is just how the build ends and not necessarily the most relevant
part)
The build was made in my autobuilder with "dpkg-buildpackage -A"
and it also fails here:
https://tests.reproducible-builds.org/debian/rb-pkg/unstable/amd64/beads.html
where you can get a full build log if you need it.
If this is really a bug in one of the build-depends, please use reassign and
affects,
so that this is still visible in the BTS web page for this package.
Thanks.
--- End Message ---
--- Begin Message ---
Source: beads
Source-Version: 1.1.18+dfsg-3
We believe that the bug you reported is fixed in the latest version of
beads, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 924...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Andreas Tille <ti...@debian.org> (supplier of updated beads package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256
Format: 1.8
Date: Wed, 13 Mar 2019 14:02:07 +0100
Source: beads
Binary: beads
Architecture: source
Version: 1.1.18+dfsg-3
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team
<debian-med-packag...@lists.alioth.debian.org>
Changed-By: Andreas Tille <ti...@debian.org>
Description:
beads - 2-DE electrophoresis gel image spot detection
Closes: 924472
Changes:
beads (1.1.18+dfsg-3) unstable; urgency=medium
.
* Add libquazip5-headers Build-Depends explicitly which seems to have
vanished from Depends of some build dependency
Closes: #924472
* Standards-Version: 4.3.0
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