I think 0.9.9.7+sog+git20160415.14274c9-1 is the source of the recent FTBFS of hhsuite: https://bugs.debian.org/917495 as our packaged version is missing the "ffsort_index" function.
The hh-suite github repo contains a submodule pointing at their fork of ffindex at ~ 2017-06-01: https://github.com/soedinglab/hh-suite/tree/v3.0-beta.3/lib → https://github.com/soedinglab/ffindex_soedinglab/tree/360e4176ece531be34a94298c808349916d016ac I suggest that we package it as part of hhsuite until another package needs it. hhsuite does provide "*-Source*" packages that include ffindex, so we wouldn't need a multi-source build. În joi, 20 dec. 2018 la 11:59, Andreas Tille <andr...@an3as.eu> a scris: > Ping? > Steffen, if you did not had a specific reason I assume it was by > mistake and will replace the Segfaulting code by the original one. > If I do not hear from you I assume you will agree. > Kind regards, Andreas. > > On Wed, Dec 19, 2018 at 09:53:38AM +0100, Andreas Tille wrote: > > Hi, > > > > after reading https://github.com/soedinglab/ffindex_soedinglab/issues/4 > > I came to the conclusion that we somehow picked the wrong fork of > > ffindex. For me it seems very probable that if we pick the old codebase > > bug #907624 which was introduced when choosing this will vanish if we > > revert to the previously packaged code base. I have a local commit > > which is doing this: > > > > > > diff --git a/debian/changelog b/debian/changelog > > index 6a26115..c409f4f 100644 > > --- a/debian/changelog > > +++ b/debian/changelog > > @@ -1,3 +1,12 @@ > > +ffindex (0.9.9.7+sog+git20160415.14274c9-1) UNRELEASED; urgency=medium > > + > > + * The previous location on Github was an improperly choosen fork > > + (see https://github.com/soedinglab/ffindex_soedinglab/issues/4) > > + Here the version is now named "0.9.9.7+sog" (Saved On Github) > > + to make it alphabethically later than the previous one. > > + > > + -- Andreas Tille <ti...@debian.org> Wed, 19 Dec 2018 09:16:09 +0100 > > + > > ffindex (0.9.9.7+soedinglab+git20180802.74550c8-1) unstable; > urgency=medium > > > > * Fix watch file (version should actually be +git20171201.74550c8 but > > diff --git a/debian/watch b/debian/watch > > index 91b4f38..b47f123 100644 > > --- a/debian/watch > > +++ b/debian/watch > > @@ -1,4 +1,4 @@ > > version=4 > > > > -opts="mode=git,pretty=0.9.9.7+soedinglab+git%cd.%h" \ > > - https://github.com/soedinglab/ffindex_soedinglab.git HEAD > > +opts="mode=git,pretty=0.9.9.7+sog+git%cd.%h" \ > > + https://github.com/ahcm/ffindex.git HEAD > > > > > > > > Upstream at github.com/ahcm/ffindex was extremely quick to tag a > > release and so it is at least active. > > > > Steffen, was your pick intentional or did you just stumbled by chance > > over the other fork? Are you OK with reverting to the old code? > > > > Kind regards > > > > Andreas. > > > > PS: I reported the segfault issue to the according fork anyway > > https://github.com/soedinglab/ffindex_soedinglab/issues/7 > > > > > > -- > > http://fam-tille.de > > > > > > -- > http://fam-tille.de > > -- Michael R. Crusoe Co-founder & Lead, Common Workflow Language project <http://www.commonwl.org/> Direktorius, VšĮ "Darbo eigos", Vilnius, Lithuania https://orcid.org/0000-0002-2961-9670 <https://impactstory.org/u/0000-0002-2961-9670> m...@commonwl.org +1 480 627 9108 / +370 653 11125
