Your message dated Thu, 13 Dec 2018 19:19:16 +0000 with message-id <e1gxwvw-000ihi...@fasolo.debian.org> and subject line Bug#916370: fixed in diamond-aligner 0.9.23+dfsg-2 has caused the Debian Bug report #916370, regarding diamond-aligner FTBFS without SSE2 to be marked as done.
This means that you claim that the problem has been dealt with. If this is not the case it is now your responsibility to reopen the Bug report if necessary, and/or fix the problem forthwith. (NB: If you are a system administrator and have no idea what this message is talking about, this may indicate a serious mail system misconfiguration somewhere. Please contact ow...@bugs.debian.org immediately.) -- 916370: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=916370 Debian Bug Tracking System Contact ow...@bugs.debian.org with problems
--- Begin Message ---Source: diamond-aligner Version: 0.9.23+dfsg-1 Severity: serious Tags: ftbfs https://buildd.debian.org/status/package.php?p=diamond-aligner&suite=sid ... /<<BUILDDIR>>/diamond-aligner-0.9.23+dfsg/src/dp/swipe/banded_3frame_swipe.cpp: In instantiation of ‘void banded_3frame_swipe(const TranslatedSequence&, Strand, std::vector<DpTarget>::iterator, std::vector<DpTarget>::iterator, DpStat&, bool) [with _sv = score_vector<short int>; _traceback = ScoreOnly; std::vector<DpTarget>::iterator = __gnu_cxx::__normal_iterator<DpTarget*, std::vector<DpTarget> >]’: /<<BUILDDIR>>/diamond-aligner-0.9.23+dfsg/src/dp/swipe/banded_3frame_swipe.cpp:243:105: required from here /<<BUILDDIR>>/diamond-aligner-0.9.23+dfsg/src/dp/swipe/banded_3frame_swipe.cpp:119:43: error: no type named ‘Score’ in ‘struct ScoreTraits<score_vector<short int> >’ typedef typename ScoreTraits<_sv>::Score Score; ^~~~~ /<<BUILDDIR>>/diamond-aligner-0.9.23+dfsg/src/dp/swipe/banded_3frame_swipe.cpp:148:45: error: ‘CHANNELS’ is not a member of ‘ScoreTraits<score_vector<short int> >’ TargetIterator<ScoreTraits<_sv>::CHANNELS> targets(subject_begin, subject_end, i1, qlen); ^~~~~~~ /<<BUILDDIR>>/diamond-aligner-0.9.23+dfsg/src/dp/swipe/banded_3frame_swipe.cpp:148:45: error: ‘CHANNELS’ is not a member of ‘ScoreTraits<score_vector<short int> >’ /<<BUILDDIR>>/diamond-aligner-0.9.23+dfsg/src/dp/swipe/banded_3frame_swipe.cpp:151:12: error: no matching function for call to ‘score_vector<short int>::score_vector(int)’ const _sv open_penalty(score_matrix.gap_open() + score_matrix.gap_extend()), ^~~~~~~~~~~~ The sane way forward might be to make the package amd64-only.
--- End Message ---
--- Begin Message ---Source: diamond-aligner Source-Version: 0.9.23+dfsg-2 We believe that the bug you reported is fixed in the latest version of diamond-aligner, which is due to be installed in the Debian FTP archive. A summary of the changes between this version and the previous one is attached. Thank you for reporting the bug, which will now be closed. If you have further comments please address them to 916...@bugs.debian.org, and the maintainer will reopen the bug report if appropriate. Debian distribution maintenance software pp. Andreas Tille <ti...@debian.org> (supplier of updated diamond-aligner package) (This message was generated automatically at their request; if you believe that there is a problem with it please contact the archive administrators by mailing ftpmas...@ftp-master.debian.org) -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 1.8 Date: Thu, 13 Dec 2018 19:52:54 +0100 Source: diamond-aligner Binary: diamond-aligner Architecture: source Version: 0.9.23+dfsg-2 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team <debian-med-packag...@lists.alioth.debian.org> Changed-By: Andreas Tille <ti...@debian.org> Description: diamond-aligner - accelerated BLAST compatible local sequence aligner Closes: 916370 Changes: diamond-aligner (0.9.23+dfsg-2) unstable; urgency=medium . * Restrict architecture to amd64 Closes: #916370 Checksums-Sha1: d7237f3aa63762f7310624add7ad2ddfe278a456 2075 diamond-aligner_0.9.23+dfsg-2.dsc c10ca1a0b31c49dda3c7a5462af1178c94d23af7 6424 diamond-aligner_0.9.23+dfsg-2.debian.tar.xz fb0f39756d6e3a7cccafb3430d887ee295fd7644 6752 diamond-aligner_0.9.23+dfsg-2_amd64.buildinfo Checksums-Sha256: 5aeda20309366098ce135a4b982efcc2bb0b65b7ca66cff101327ea464dabdf2 2075 diamond-aligner_0.9.23+dfsg-2.dsc 9db5864599c62e116d2f827f1cc9ad4496ee7bc324c3d7f4551b5f258c514e6e 6424 diamond-aligner_0.9.23+dfsg-2.debian.tar.xz 3548d8c80477229052fa79eded4fbb54025f9f5a3bf32cd7f7fc97eab6486319 6752 diamond-aligner_0.9.23+dfsg-2_amd64.buildinfo Files: d2b4b75d09cc7d0475785865496201a7 2075 science optional diamond-aligner_0.9.23+dfsg-2.dsc df07740b61ee0781b37323f1f9e48ab3 6424 science optional diamond-aligner_0.9.23+dfsg-2.debian.tar.xz 252cf473df41be203e864f7f287ea9f7 6752 science optional diamond-aligner_0.9.23+dfsg-2_amd64.buildinfo -----BEGIN PGP SIGNATURE----- iQJFBAEBCgAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAlwSq4cRHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtEQ5Q//S61MI+C2eNulJlJjuN8pYMyj5M90DubX aWNSQsDtNUtERANDHbVSa+1MlhvEaKXGQup8yAutMxDO81Ix/cdfOZlFyhrG8d5P RyhuPzjivQSo4zJh2cFwdy4tmuG7Xkhjif+uiklS2ffVx5uo75E0YrzDdPq+aPQ+ oc/GhN+wXi5pDpc0KAo52EaISP4U9VIG3Iz6mXvbF1Luw/keVGlLyxcQtrFC9Bro EyueikqTiKKRudA2s1FBzNw/WM62M2ImHiznF3LgW1GJegEtJ5QPwqVchGllRUMI zUF3iI6GPp2pYnkm/qfU9Tpc/4oXRHzbTt6EDU4HPVQJ50b+jZQ3ljbPQ8WdzhLB ErPxdh/hViqwZOz5WA5W2HAae2ZFD4MKsdI3iWI8cjtaYZqk6FFeYOCcv3QUL80o gHGraoiFWchWqKAgbtyydn9x/DBI+jIV372cXvF5XQDA8JFIO4tgO3X+xEXlDu1e ygz9EvnPh4LX0WldsaFkQIFcAvajB0NBJP0UOPYoVT3dyBULKBYTva2qDHrksik0 U2OKRc2gQ4217ZiMEAFoFOpWsTRcHeG3VNC0c3ZGl6a+BiQouV3SAGUCOtYfbweH pusq97GSF1aRcs3UG3vxnYcvBjTH6sEWQ+J1RP7seXuTasei39sLc/51SugkjZjk t2fqbHktFHA= =A3Lw -----END PGP SIGNATURE-----
--- End Message ---
