Your message dated Wed, 24 Oct 2018 07:41:48 +0200
with message-id <20181024054148.hzpyjbgl4eke2...@an3as.eu>
and subject line Forgot to close bugs in changelog of latest upload
has caused the Debian Bug report #906381,
regarding lmfit-py: FTBFS in buster/sid (failing tests)
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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--
906381: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=906381
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Package: src:lmfit-py
Version: 0.9.7+dfsg-1
Severity: serious
Tags: ftbfs
Dear maintainer:
I tried to build this package in buster but it failed:
--------------------------------------------------------------------------------
[...]
debian/rules build-indep
dh build-indep --with python2,python3,sphinxdoc --buildsystem=pybuild
dh_update_autotools_config -i -O--buildsystem=pybuild
dh_auto_configure -i -O--buildsystem=pybuild
I: pybuild base:217: python2.7 setup.py config
running config
I: pybuild base:217: python3.6 setup.py config
running config
debian/rules override_dh_auto_build
make[1]: Entering directory '/<<BUILDDIR>>/lmfit-py-0.9.7+dfsg'
dh_auto_build
I: pybuild base:217: /usr/bin/python setup.py build
running build
running build_py
[... snipped ...]
copying images... [ 89%] _images/model_fit4.png
copying images... [ 94%] _images/conf_interval1.png
copying images... [100%] _images/models_peak4.png
copying static files... done
copying extra files... done
dumping search index in English (code: en) ... done
dumping object inventory... done
build succeeded, 9 warnings.
The HTML pages are in build/html.
make[1]: Leaving directory '/<<BUILDDIR>>/lmfit-py-0.9.7+dfsg'
dh_auto_test -i -O--buildsystem=pybuild
I: pybuild base:217: cd
/<<BUILDDIR>>/lmfit-py-0.9.7+dfsg/.pybuild/cpython2_2.7_lmfit/build; python2.7
-m nose tests
...................................lmfit/minimizer.py:1574: RuntimeWarning:
invalid value encountered in log
_neg2_log_likel = result.ndata * np.log(result.chisqr / result.ndata)
......E................S....S......................................................................................................................capi_return
is NULL
Call-back cb_calcfc_in__cobyla__user__routines failed.
.........................
======================================================================
ERROR: test_itercb.test_itercb
----------------------------------------------------------------------
Traceback (most recent call last):
File "/usr/lib/python2.7/dist-packages/nose/case.py", line 197, in runTest
self.test(*self.arg)
File
"/<<BUILDDIR>>/lmfit-py-0.9.7+dfsg/.pybuild/cpython2_2.7_lmfit/build/tests/test_itercb.py",
line 24, in test_itercb
out = mod.fit(y, pars, x=x, iter_cb=per_iteration)
File "lmfit/model.py", line 736, in fit
output.fit(data=data, weights=weights)
File "lmfit/model.py", line 951, in fit
_ret = self.minimize(method=self.method)
File "lmfit/minimizer.py", line 1649, in minimize
return function(**kwargs)
File "lmfit/minimizer.py", line 1302, in leastsq
lsout = scipy_leastsq(self.__residual, vars, **lskws)
File "/usr/lib/python2.7/dist-packages/scipy/optimize/minpack.py", line 394,
in leastsq
gtol, maxfev, epsfcn, factor, diag)
ValueError: The array returned by a function changed size between calls
----------------------------------------------------------------------
Ran 207 tests in 7.658s
FAILED (SKIP=2, errors=1)
E: pybuild pybuild:338: test: plugin distutils failed with: exit code=1: cd
/<<BUILDDIR>>/lmfit-py-0.9.7+dfsg/.pybuild/cpython2_2.7_lmfit/build; python2.7
-m nose tests
dh_auto_test: pybuild --test --test-nose -i python{version} -p 2.7 returned
exit code 13
make: *** [debian/rules:21: build-indep] Error 25
dpkg-buildpackage: error: debian/rules build-indep subprocess returned exit
status 2
--------------------------------------------------------------------------------
The build was made with "dpkg-buildpackage -A" in my autobuilder.
Most probably, it also fails here in reproducible builds:
https://tests.reproducible-builds.org/debian/rb-pkg/unstable/amd64/lmfit-py.html
where you can get a full build log if you need it.
If this is really a bug in one of the build-depends, please use reassign and
affects,
so that this is still visible in the BTS web page for this package.
Thanks.
--- End Message ---
--- Begin Message ---
Hi,
the new upstream version 0.9.11 closes both bugs.
Kind regards, Andreas
--
http://fam-tille.de
--- End Message ---