Your message dated Sat, 04 Aug 2018 03:48:55 +0000
with message-id <e1flnyl-0002vo...@fasolo.debian.org>
and subject line Bug#904690: fixed in libmuscle 3.7+4565-5
has caused the Debian Bug report #904690,
regarding progressivemauve: broken in buster: error while loading shared 
libraries: libMUSCLE-3.7.so.1
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
904690: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=904690
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Package: progressivemauve
Version: 1.2.0+4713+dfsg-1
Severity: grave
Justification: renders package unusable

Triggered by the failure of the autopkgtest reference¹ I installed
progressivemauve on my buster system. It can't even start.

paul@testavoira ~ $ progressiveMauve
progressiveMauve: error while loading shared libraries: libMUSCLE-3.7.so.1: 
cannot open shared object file: No such file or directory
paul@testavoira ~ $ progressiveMauve -h
progressiveMauve: error while loading shared libraries: libMUSCLE-3.7.so.1: 
cannot open shared object file: No such file or directory

progressivemauve is part of the auto-libgenome transition² which linked me to
the build log which show that it failed to rebuild for libmuscle (I actually
didn't look up why it was binNMUd for that). The current state of
progressivemauve in buster is broken. Please investigate how to fix it.

Paul

¹ https://ci.debian.net/packages/p/progressivemauve/testing/amd64/
² https://release.debian.org/transitions/html/auto-libgenome.html

-- System Information:
Debian Release: buster/sid
  APT prefers testing-debug
  APT policy: (500, 'testing-debug'), (500, 'testing'), (200, 'testing'), (50, 
'testing')
Architecture: amd64 (x86_64)

Kernel: Linux 4.16.0-2-amd64 (SMP w/2 CPU cores)
Locale: LANG=en_US.UTF-8, LC_CTYPE=en_US.UTF-8 (charmap=UTF-8), 
LANGUAGE=en_US:en (charmap=UTF-8)
Shell: /bin/sh linked to /bin/dash
Init: systemd (via /run/systemd/system)
LSM: AppArmor: enabled

Versions of packages progressiveMauve depends on:
ii  libboost-filesystem1.62.0       1.62.0+dfsg-8
ii  libboost-iostreams1.62.0        1.62.0+dfsg-8
ii  libboost-program-options1.62.0  1.62.0+dfsg-8
ii  libboost-system1.62.0           1.62.0+dfsg-8
ii  libc6                           2.27-3
ii  libgcc1                         1:8.1.0-10
ii  libgenome-1.3-0v5               1.3.1-10
ii  libmems-1.6-1v5                 1.6.0+4725-4
ii  libmuscle1 [libmuscle-3.7-1]    3.7+4565-4
ii  libstdc++6                      8.1.0-10

progressiveMauve recommends no packages.

progressiveMauve suggests no packages.

-- no debconf information

Attachment: signature.asc
Description: OpenPGP digital signature


--- End Message ---
--- Begin Message ---
Source: libmuscle
Source-Version: 3.7+4565-5

We believe that the bug you reported is fixed in the latest version of
libmuscle, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 904...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Andreas Tille <ti...@debian.org> (supplier of updated libmuscle package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)


-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256

Format: 1.8
Date: Sat, 04 Aug 2018 05:12:53 +0200
Source: libmuscle
Binary: libmuscle-dev libmuscle1
Architecture: source
Version: 3.7+4565-5
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team 
<debian-med-packag...@lists.alioth.debian.org>
Changed-By: Andreas Tille <ti...@debian.org>
Description:
 libmuscle-dev - multiple alignment development library for protein sequences
 libmuscle1 - multiple alignment library for protein sequences
Closes: 904690
Changes:
 libmuscle (3.7+4565-5) unstable; urgency=medium
 .
   * Provide link to old versioned lib
     Closes: #904690
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libmuscle_3.7+4565-5.debian.tar.xz
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 4f572e9825092b2c81d7283611a3383bad5805bef5ccc26b426d5815c79ff505 11904 
libmuscle_3.7+4565-5.debian.tar.xz
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 6e40e1b0ede47b0d5c96726470e300f6 11904 science optional 
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