Your message dated Wed, 06 Jun 2018 09:39:40 +0000
with message-id <e1fquuq-000iio...@fasolo.debian.org>
and subject line Bug#899205: fixed in python-cogent 1.9-12
has caused the Debian Bug report #899205,
regarding python-cogent: Test suite fails with latest matplotlib
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)
--
899205: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=899205
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Package: python-cogent
Severity: serious
Justification: FTBFS
User: debian...@lists.debian.org
The package fails to build with latest matplotlib which became
obvious in the CI report[1]. It fails as well when building the
package.
The issue is reported upstream.[2]
Kind regards,
Andreas.
[1] https://ci.debian.net/packages/p/python-cogent/testing/amd64/
[2] https://github.com/pycogent/pycogent/issues/112
-- System Information:
Debian Release: 9.0
APT prefers stable-updates
APT policy: (500, 'stable-updates'), (500, 'stable')
Architecture: amd64 (x86_64)
Kernel: Linux 4.9.0-5-amd64 (SMP w/1 CPU core)
Locale: LANG=de_DE.UTF-8, LC_CTYPE=de_DE.UTF-8 (charmap=UTF-8),
LANGUAGE=de_DE.UTF-8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/dash
Init: systemd (via /run/systemd/system)
Versions of packages python-cogent depends on:
ii libc6 2.24-11+deb9u1
ii python 2.7.13-2
pn python-matplotlib <none>
pn python-numpy <none>
pn python-numpy-abi9 <none>
Versions of packages python-cogent recommends:
pn blast2 <none>
pn bwa <none>
pn cd-hit <none>
pn clearcut <none>
pn dialign <none>
pn muscle <none>
Versions of packages python-cogent suggests:
pn cdbfasta <none>
pn clustalw <none>
pn fasttree <none>
pn infernal <none>
pn mafft <none>
pn mothur <none>
pn parsinsert <none>
pn python-cogent-doc <none>
pn raxml <none>
pn rdp-classifier <none>
pn rtax <none>
--- End Message ---
--- Begin Message ---
Source: python-cogent
Source-Version: 1.9-12
We believe that the bug you reported is fixed in the latest version of
python-cogent, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 899...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Andreas Tille <ti...@debian.org> (supplier of updated python-cogent package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256
Format: 1.8
Date: Wed, 06 Jun 2018 11:10:01 +0200
Source: python-cogent
Binary: python-cogent python-cogent-doc
Architecture: source
Version: 1.9-12
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team
<debian-med-packag...@lists.alioth.debian.org>
Changed-By: Andreas Tille <ti...@debian.org>
Description:
python-cogent - framework for genomic biology
python-cogent-doc - docs for python-cogent
Closes: 898334 899205
Changes:
python-cogent (1.9-12) unstable; urgency=medium
.
* Add registry data
* Testsuite: autopkgtest-pkg-python
* honor "nocheck" in DEB_BUILD_OPTIONS
Closes: #898334
* debhelper 11
* Point Vcs fields to salsa.debian.org
* Standards-Version: 4.1.4
* Fix suite fails with latest matplotlib
Closes: #899205
* Fix privacy issue in doc
* Drop obsolete file debian/pyversions
* Drop unneeded get-orig-source target
* Do not parse d/changelog
* Rename debian/tests/control to debian/tests/control.autodep8
* Remove useless doctree files
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python-cogent_1.9-12.debian.tar.xz
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Files:
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