Your message dated Tue, 04 Apr 2006 04:32:13 -0700
with message-id <[EMAIL PROTECTED]>
and subject line Bug#360374: fixed in gromacs 3.3-2
has caused the attached Bug report to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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Debian bug tracking system administrator
(administrator, Debian Bugs database)
--- Begin Message ---
Package: gromacs
Version: 3.3-1
Severity: serious
Justification: Policy 0.0 packages must not overlap
Hi,
here is the problem:
Unpacking gromacs (from .../gromacs_3.3-1_i386.deb) ...
dpkg - warning, overriding problem because --force enabled:
trying to overwrite `/usr/bin/disco', which is also in package mono-mcs
Unpacking gromacs-doc (from .../gromacs-doc_3.3-1_all.deb) ...
dpkg - warning, overriding problem because --force enabled:
trying to overwrite `/usr/share/man/man1/disco.1.gz', which is also in package
mono-mcs
-- System Information:
Debian Release: testing/unstable
APT prefers unstable
APT policy: (100, 'unstable'), (99, 'experimental')
Architecture: i386 (i686)
Shell: /bin/sh linked to /bin/bash
Kernel: Linux 2.6.16-1-686
Locale: [EMAIL PROTECTED], [EMAIL PROTECTED] (charmap=ISO-8859-15)
Versions of packages gromacs depends on:
ii fftw3 3.0.1-14 library for computing Fast Fourier
ii lesstif2 1:0.94.4-1.1 OSF/Motif 2.1 implementation relea
ii libc6 2.3.6-4 GNU C Library: Shared libraries an
ii libice6 6.9.0.dfsg.1-5 Inter-Client Exchange library
ii libsm6 6.9.0.dfsg.1-5 X Window System Session Management
ii libx11-6 6.9.0.dfsg.1-5 X Window System protocol client li
ii libxext6 6.9.0.dfsg.1-5 X Window System miscellaneous exte
ii libxft2 2.1.8.2-5.1 FreeType-based font drawing librar
ii libxp6 6.9.0.dfsg.1-5 X Window System printing extension
ii libxrender1 1:0.9.0.2-1 X Rendering Extension client libra
ii libxt6 6.9.0.dfsg.1-5 X Toolkit Intrinsics
Versions of packages gromacs recommends:
ii gromacs-doc 3.3-1 GROMACS molecular dynamics sim, do
-- no debconf information
--- End Message ---
--- Begin Message ---
Source: gromacs
Source-Version: 3.3-2
We believe that the bug you reported is fixed in the latest version of
gromacs, which is due to be installed in the Debian FTP archive:
gromacs-dev_3.3-2_i386.deb
to pool/main/g/gromacs/gromacs-dev_3.3-2_i386.deb
gromacs-doc_3.3-2_all.deb
to pool/main/g/gromacs/gromacs-doc_3.3-2_all.deb
gromacs-lam_3.3-2_i386.deb
to pool/main/g/gromacs/gromacs-lam_3.3-2_i386.deb
gromacs-mpich_3.3-2_i386.deb
to pool/main/g/gromacs/gromacs-mpich_3.3-2_i386.deb
gromacs_3.3-2.diff.gz
to pool/main/g/gromacs/gromacs_3.3-2.diff.gz
gromacs_3.3-2.dsc
to pool/main/g/gromacs/gromacs_3.3-2.dsc
gromacs_3.3-2_i386.deb
to pool/main/g/gromacs/gromacs_3.3-2_i386.deb
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to [EMAIL PROTECTED],
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Nicholas Breen <[EMAIL PROTECTED]> (supplier of updated gromacs package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [EMAIL PROTECTED])
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA1
Format: 1.7
Date: Mon, 3 Apr 2006 09:50:44 -0700
Source: gromacs
Binary: gromacs gromacs-lam gromacs-dev gromacs-mpich gromacs-doc
Architecture: source i386 all
Version: 3.3-2
Distribution: unstable
Urgency: low
Maintainer: Nicholas Breen <[EMAIL PROTECTED]>
Changed-By: Nicholas Breen <[EMAIL PROTECTED]>
Description:
gromacs - Molecular dynamics simulator, with building and analysis tools
gromacs-dev - GROMACS molecular dynamics sim, development kit
gromacs-doc - GROMACS molecular dynamics sim, documentation
gromacs-lam - Molecular dynamics sim, binaries for LAM-MPI parallelization
gromacs-mpich - Molecular dynamics sim, binaries for MPICH parallelization
Closes: 359999 360002 360374 360486
Changes:
gromacs (3.3-2) unstable; urgency=low
.
* Adding Build-Depends on g77 for alpha only. (No other architectures
use FORTRAN inner loops by default.) (Closes: #360486)
* Recategorizing to different parts of archive: gromacs-doc to 'doc',
gromacs-dev to 'devel'.
* Correct implicit pointer size declaration in src/mdlib/ghat.c, which
could lead to segfaults on 64-bit architectures. Thanks to Dann
Frazier for catching it. (Closes: #360002)
* Registered gromacs-doc with doc-base. Patch courtesy of Drew Parsons.
(Closes: #359999)
* Renaming /usr/bin/disco to g_disco, to avoid filename conflict with
mono-mcs. (Closes: #360374)
Files:
76787fc7e3fb8fe300120e60b5d8e0c1 793 science extra gromacs_3.3-2.dsc
cb90ef6e13129e75154ab2104ff5cf35 2206368 science extra gromacs_3.3-2.diff.gz
dde60cd23545c45608c9b36f72eb94b9 2542296 doc extra gromacs-doc_3.3-2_all.deb
c972acb35de9692890ad80e9c31921aa 3515268 science extra gromacs_3.3-2_i386.deb
e69e5750a8322154a909ec615066cc5b 5375688 devel extra gromacs-dev_3.3-2_i386.deb
a5ca5df78f2c20afd620ee0346dd74f2 1559628 science extra
gromacs-mpich_3.3-2_i386.deb
f0dfe4b205adb8d12feacbfa95bbb9f4 1322454 science extra
gromacs-lam_3.3-2_i386.deb
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--- End Message ---
