Your message dated Sat, 19 May 2018 07:04:29 +0000
with message-id <e1fjvun-0003ri...@fasolo.debian.org>
and subject line Bug#896483: fixed in beast-mcmc 1.8.4+dfsg.1-3
has caused the Debian Bug report #896483,
regarding beast-mcmc FTBFS with TeX Live 2018
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
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misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)
--
896483: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=896483
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: beast-mcmc
Version: 1.8.4+dfsg.1-2
Severity: serious
Tags: patch
https://tests.reproducible-builds.org/debian/rb-pkg/unstable/amd64/beast-mcmc.html
...
#
# Build extra LaTeX documentation
#
cd doc/BookSection; pdflatex -interaction=batchmode BookSection.tex; pdflatex
-interaction=batchmode BookSection.tex
This is pdfTeX, Version 3.14159265-2.6-1.40.19 (TeX Live 2018/Debian)
(preloaded format=pdflatex)
restricted \write18 enabled.
entering extended mode
This is pdfTeX, Version 3.14159265-2.6-1.40.19 (TeX Live 2018/Debian)
(preloaded format=pdflatex)
restricted \write18 enabled.
entering extended mode
cd doc/tutorial/Virus_Practical*; pdflatex -interaction=batchmode
Practical_BEAST.tex; pdflatex -interaction=batchmode Practical_BEAST.tex
This is pdfTeX, Version 3.14159265-2.6-1.40.19 (TeX Live 2018/Debian)
(preloaded format=pdflatex)
restricted \write18 enabled.
entering extended mode
This is pdfTeX, Version 3.14159265-2.6-1.40.19 (TeX Live 2018/Debian)
(preloaded format=pdflatex)
restricted \write18 enabled.
entering extended mode
make[1]: *** [debian/rules:56: override_dh_auto_build] Error 1
Fix is attached.
Description: Fix encoding issues that caused FTBFS with TeX Live 2018
Author: Adrian Bunk <b...@debian.org>
--- beast-mcmc-1.8.4+dfsg.1.orig/doc/BEAST14_Manual.tex
+++ beast-mcmc-1.8.4+dfsg.1/doc/BEAST14_Manual.tex
@@ -1,6 +1,7 @@
%% LyX 1.4.3 created this file. For more info, see http://www.lyx.org/.
%% Do not edit unless you really know what you are doing.
\documentclass[a4paper, english]{article}
+ \usepackage[latin1]{inputenc}
\usepackage{graphicx}
\usepackage{amssymb}
\usepackage{epstopdf}
---
beast-mcmc-1.8.4+dfsg.1.orig/doc/tutorial/Virus_Practical_1_6_1/Practical_BEAST.tex
+++
beast-mcmc-1.8.4+dfsg.1/doc/tutorial/Virus_Practical_1_6_1/Practical_BEAST.tex
@@ -1,4 +1,6 @@
\documentclass[12pt]{article}
+\usepackage[latin1]{inputenc}
+\usepackage[T1]{fontenc}
\usepackage{graphicx}
\usepackage[left=3cm,top=3cm,right=3cm,bottom=3cm]{geometry}
--- End Message ---
--- Begin Message ---
Source: beast-mcmc
Source-Version: 1.8.4+dfsg.1-3
We believe that the bug you reported is fixed in the latest version of
beast-mcmc, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 896...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Andreas Tille <ti...@debian.org> (supplier of updated beast-mcmc package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256
Format: 1.8
Date: Sat, 19 May 2018 08:28:51 +0200
Source: beast-mcmc
Binary: beast-mcmc libnucleotidelikelihoodcore0 beast-mcmc-examples
beast-mcmc-doc
Architecture: source
Version: 1.8.4+dfsg.1-3
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team
<debian-med-packag...@lists.alioth.debian.org>
Changed-By: Andreas Tille <ti...@debian.org>
Description:
beast-mcmc - Bayesian MCMC phylogenetic inference
beast-mcmc-doc - Bayesian MCMC phylogenetic inference - documentation
beast-mcmc-examples - Bayesian MCMC phylogenetic inference - example data
libnucleotidelikelihoodcore0 - implementation of LikelihoodCore for
nucleotides used by beast-mc
Closes: 896483
Changes:
beast-mcmc (1.8.4+dfsg.1-3) unstable; urgency=medium
.
[ Steffen Moeller ]
* d/control: Standards-Version: 4.1.3 (no changes needed)
* d/u/metadata:
- added RRIDs
- added \n to end of file
.
[ Andreas Tille ]
* Point Vcs fields to salsa.debian.org
* Standards-Version: 4.1.4
* debhelper 11
* Build-Depends: texlive-fonts-recommended
.
[ Adrian Bunk ]
* Fix encoding issues that caused FTBFS with TeX Live 2018
Closes: #896483
Checksums-Sha1:
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Files:
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beast-mcmc_1.8.4+dfsg.1-3.dsc
85e71cedd69d1c72201e2f094ecb5896 17908 science optional
beast-mcmc_1.8.4+dfsg.1-3.debian.tar.xz
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