Your message dated Sun, 06 May 2018 20:49:55 +0000
with message-id <e1ffqbt-000bme...@fasolo.debian.org>
and subject line Bug#897095: fixed in bagel 1.1.1-1
has caused the Debian Bug report #897095,
regarding bagel FTBFS: cannot find -lmpi
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)
--
897095: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=897095
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: bagel
Version: 1.1.0-1
Severity: serious
https://tests.reproducible-builds.org/debian/rb-pkg/unstable/amd64/bagel.html
...
dh_auto_configure -- \
--datadir=/usr/share/bagel \
--libdir=/usr/lib/bagel \
--enable-static \
--disable-shared \
--with-boost \
--with-libxc=yes \
--with-mpi=openmpi \
--disable-scalapack \
--enable-smith
...
configure: error: in `/build/1st/bagel-1.1.0':
configure: error: C compiler cannot create executables
...
configure:3525: checking whether the C compiler works
configure:3547: gcc -g -O2 -fstack-protector-strong -Wformat
-Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro conftest.c
-lblas -llapack -lpthread -lmpi >&5
/usr/bin/x86_64-linux-gnu-ld: cannot find -lmpi
collect2: error: ld returned 1 exit status
Seems to be related to the recent MPI changes.
My first question would be whether --with-mpi=openmpi is correct
when the build dependency is on libmpich-dev.
--- End Message ---
--- Begin Message ---
Source: bagel
Source-Version: 1.1.1-1
We believe that the bug you reported is fixed in the latest version of
bagel, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 897...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Michael Banck <mba...@debian.org> (supplier of updated bagel package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256
Format: 1.8
Date: Sun, 06 May 2018 22:26:51 +0200
Source: bagel
Binary: bagel
Architecture: source
Version: 1.1.1-1
Distribution: unstable
Urgency: medium
Maintainer: Debichem Team <debichem-de...@lists.alioth.debian.org>
Changed-By: Michael Banck <mba...@debian.org>
Description:
bagel - Computational Chemistry Package
Closes: 897095
Changes:
bagel (1.1.1-1) unstable; urgency=medium
.
* New upstream point release.
* debian/patches/add_missing_includes.patch: New patch.
* debian/rules (LIBS): Removed -lmpi (Closes: 897095).
Checksums-Sha1:
667dffab577f9da41da2e3c0b6ed9745b3ecf8b8 2062 bagel_1.1.1-1.dsc
8bca6e0f0bafbb16d0a554250f587c4c88e10ada 41468601 bagel_1.1.1.orig.tar.gz
8e3918c469476fa681f22ef856405588834d68b8 5764 bagel_1.1.1-1.debian.tar.xz
553f3784c17b3a0de52c9c826c66163084cf0933 8030 bagel_1.1.1-1_source.buildinfo
Checksums-Sha256:
fc914b40c19f92970f45f99ed0ed62a44d97165607970b620b6b322fab51f58a 2062
bagel_1.1.1-1.dsc
60d46496c25d18698acf67f39ca7150d0c6daf49944a8e47cf0c10a0e31d245f 41468601
bagel_1.1.1.orig.tar.gz
2cfb7399fafb9ef7cade2b104daee73aed79b7c927d31111b3db4c98724994d2 5764
bagel_1.1.1-1.debian.tar.xz
6be76add5f1a96194b144bc2f862bab0826d5783f3f4d1e7a4febc86ec59c969 8030
bagel_1.1.1-1_source.buildinfo
Files:
60b150bc01aaae8d37d86e077bcb73a8 2062 science optional bagel_1.1.1-1.dsc
1f535cf7eda690d5b3aee7012e515daf 41468601 science optional
bagel_1.1.1.orig.tar.gz
5541cbf5c68247b70e046a7f2c25d5e6 5764 science optional
bagel_1.1.1-1.debian.tar.xz
6a3c0450847eef5c477ca541c0da164f 8030 science optional
bagel_1.1.1-1_source.buildinfo
-----BEGIN PGP SIGNATURE-----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=IPPO
-----END PGP SIGNATURE-----
--- End Message ---