Source: ruby-bio
Version: 1.5.0-2
Severity: serious
Tags: buster sid
https://tests.reproducible-builds.org/debian/rb-pkg/unstable/amd64/ruby-bio.html
...
┌──────────────────────────────────────────────────────────────────────────────┐
│ Run tests for ruby2.5 from debian/ruby-tests.rb │
└──────────────────────────────────────────────────────────────────────────────┘
RUBYLIB=/build/1st/ruby-bio-1.5.0/debian/ruby-bio/usr/lib/ruby/vendor_ruby:.
GEM_PATH=debian/ruby-bio/usr/share/rubygems-integration/all:/var/lib/gems/2.5.0:/usr/lib/x86_64-linux-gnu/rubygems-integration/2.5.0:/usr/share/rubygems-integration/2.5.0:/usr/share/rubygems-integration/all
ruby2.5 debian/ruby-tests.rb
Loaded suite debian/ruby-tests
Started
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.................................................................../build/1st/ruby-bio-1.5.0/test/unit/bio/test_alignment.rb:631:
warning: constant ::Fixnum is deprecated
/build/1st/ruby-bio-1.5.0/test/unit/bio/test_alignment.rb:633: warning:
constant ::Fixnum is deprecated
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.............................................................../build/1st/ruby-bio-1.5.0/lib/bio/util/restriction_enzyme/range/sequence_range/calculated_cuts.rb:154:
warning: constant ::Fixnum is deprecated
/build/1st/ruby-bio-1.5.0/lib/bio/util/restriction_enzyme/range/sequence_range/calculated_cuts.rb:154:
warning: constant ::Fixnum is deprecated
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........................................................../build/1st/ruby-bio-1.5.0/lib/bio/db/soft.rb:220:
warning: constant ::Fixnum is deprecated
/build/1st/ruby-bio-1.5.0/lib/bio/db/soft.rb:226: warning: constant ::Fixnum is
deprecated
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.O
===============================================================================
test randomly failing skipped
[test_randomize_equiprobability(Bio::TestSequenceCommon::TestSequenceCommonRandomizeChi2)]
/build/1st/ruby-bio-1.5.0/test/unit/bio/sequence/test_common.rb:324:in
`test_randomize_equiprobability'
===============================================================================
O
===============================================================================
test randomly failing skipped
[test_randomize_with_hash_equiprobability(Bio::TestSequenceCommon::TestSequenceCommonRandomizeChi2)]
/build/1st/ruby-bio-1.5.0/test/unit/bio/sequence/test_common.rb:330:in
`test_randomize_with_hash_equiprobability'
===============================================================================
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........................................................E
===============================================================================
Error: test_na_seqstat(Bio::TestShellPluginSeq): ArgumentError: incomplete
format specifier; use %% (double %) instead
/build/1st/ruby-bio-1.5.0/lib/bio/shell/plugin/seq.rb:85:in `format'
/build/1st/ruby-bio-1.5.0/lib/bio/shell/plugin/seq.rb:85:in `block in seqstat'
/build/1st/ruby-bio-1.5.0/lib/bio/shell/plugin/seq.rb:84:in `each'
/build/1st/ruby-bio-1.5.0/lib/bio/shell/plugin/seq.rb:84:in `seqstat'
/build/1st/ruby-bio-1.5.0/test/unit/bio/shell/plugin/test_seq.rb:118:in
`test_na_seqstat'
115: $str << obj.to_s
116: end
117: end
=> 118: seqstat(naseq)
119: undef puts
120: alias puts puts_orig
121: assert_equal(output, $str)
===============================================================================
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Finished in 15.8237365 seconds.
------
3849 tests, 21478 assertions, 0 failures, 1 errors, 0 pendings, 2 omissions, 0
notifications
99.974% passed
------
243.24 tests/s, 1357.33 assertions/s
ERROR: Test "ruby2.5" failed. Exiting.
dh_auto_install: dh_ruby --install /build/1st/ruby-bio-1.5.0/debian/ruby-bio
returned exit code 1
make[1]: *** [debian/rules:32: override_dh_auto_install] Error 1
