Your message dated Sat, 02 Dec 2017 16:03:43 +0000
with message-id <e1elagv-000izv...@fasolo.debian.org>
and subject line Bug#880248: fixed in circlator 1.5.1-2
has caused the Debian Bug report #880248,
regarding circlator: FTBFS: Test failures
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
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misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)
--
880248: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=880248
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: circlator
Version: 1.5.1-1
Severity: serious
Tags: buster sid
User: debian...@lists.debian.org
Usertags: qa-ftbfs-20171030 qa-ftbfs
Justification: FTBFS on amd64
Hi,
During a rebuild of all packages in sid, your package failed to build on
amd64.
Relevant part (hopefully):
> File "/<<PKGBUILDDIR>>/circlator/tests/assemble_test.py", line 71, in
> test_make_canu_command
> assembler='canu'
> File "/<<PKGBUILDDIR>>/circlator/assemble.py", line 41, in __init__
> self.canu = external_progs.make_and_check_prog('canu',
> verbose=self.verbose, required=True)
> File "/<<PKGBUILDDIR>>/circlator/external_progs.py", line 81, in
> make_and_check_prog
> handle_error('Found ' + name + " but couldn't get version.",
> raise_error=raise_error)
> File "/<<PKGBUILDDIR>>/circlator/external_progs.py", line 56, in
> handle_error
> raise Error(message + '\nCannot continue')
> circlator.external_progs.Error: Found canu but couldn't get version.
> Cannot continue
>
> ----------------------------------------------------------------------
> Ran 107 tests in 2.654s
>
> FAILED (SKIP=6, errors=1)
> debian/rules:12: recipe for target 'override_dh_auto_test' failed
The full build log is available from:
http://aws-logs.debian.net/2017/10/30/circlator_1.5.1-1_unstable.log
A list of current common problems and possible solutions is available at
http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute!
About the archive rebuild: The rebuild was done on EC2 VM instances from
Amazon Web Services, using a clean, minimal and up-to-date chroot. Every
failed build was retried once to eliminate random failures.
--- End Message ---
--- Begin Message ---
Source: circlator
Source-Version: 1.5.1-2
We believe that the bug you reported is fixed in the latest version of
circlator, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 880...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Andreas Tille <ti...@debian.org> (supplier of updated circlator package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256
Format: 1.8
Date: Sat, 02 Dec 2017 16:48:41 +0100
Source: circlator
Binary: circlator
Architecture: source all
Version: 1.5.1-2
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team
<debian-med-packag...@lists.alioth.debian.org>
Changed-By: Andreas Tille <ti...@debian.org>
Description:
circlator - circularize genome assemblies
Closes: 880248
Changes:
circlator (1.5.1-2) unstable; urgency=medium
.
* Team upload.
* Fix canu detection
Closes: #880248
* Standards-Version: 4.1.1
* debhelper 10
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