Your message dated Sat, 2 Sep 2017 16:03:50 +0200 with message-id <20170902140350.n3b56pyjmdm76...@an3as.eu> and subject line Done with new upstream has caused the Debian Bug report #871183, regarding r-cran-randomfields: FTBFS: R segfaults to be marked as done.
This means that you claim that the problem has been dealt with. If this is not the case it is now your responsibility to reopen the Bug report if necessary, and/or fix the problem forthwith. (NB: If you are a system administrator and have no idea what this message is talking about, this may indicate a serious mail system misconfiguration somewhere. Please contact ow...@bugs.debian.org immediately.) -- 871183: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=871183 Debian Bug Tracking System Contact ow...@bugs.debian.org with problems
--- Begin Message ---Source: r-cran-randomfields Version: 3.1.36-1 Severity: serious Tags: buster sid User: debian...@lists.debian.org Usertags: qa-ftbfs-20170805 qa-ftbfs Justification: FTBFS on amd64 Hi, During a rebuild of all packages in sid, your package failed to build on amd64. Relevant part (hopefully): > make[1]: Entering directory '/<<PKGBUILDDIR>>/src' > make[1]: Leaving directory '/<<PKGBUILDDIR>>/src' > installing to > /<<PKGBUILDDIR>>/debian/r-cran-randomfields/usr/lib/R/site-library/RandomFields/libs > ** R > ** data > ** inst > ** preparing package for lazy loading > > *** caught segfault *** > address 0x1, cause 'memory not mapped' > > Traceback: > 1: dyn.load(file, DLLpath = DLLpath, ...) > 2: library.dynam(lib, package, package.lib) > 3: loadNamespace(package, lib.loc) > 4: doTryCatch(return(expr), name, parentenv, handler) > 5: tryCatchOne(expr, names, parentenv, handlers[[1L]]) > 6: tryCatchList(expr, classes, parentenv, handlers) > 7: tryCatch({ attr(package, "LibPath") <- which.lib.loc ns <- > loadNamespace(package, lib.loc) env <- attachNamespace(ns, pos = pos, > deps)}, error = function(e) { P <- if (!is.null(cc <- conditionCall(e))) > paste(" in", deparse(cc)[1L]) else "" msg <- gettextf("package or > namespace load failed for %s%s:\n %s", sQuote(package), P, > conditionMessage(e)) if (logical.return) message(paste("Error:", > msg), domain = NA) else stop(msg, call. = FALSE, domain = NA)}) > 8: library(pkg, character.only = TRUE, logical.return = TRUE, lib.loc = > lib.loc, quietly = quietly) > 9: .getRequiredPackages2(pkgInfo, quietly, lib.loc, useImports) > 10: .getRequiredPackages(quietly = TRUE) > 11: withCallingHandlers(expr, packageStartupMessage = function(c) > invokeRestart("muffleMessage")) > 12: suppressPackageStartupMessages(.getRequiredPackages(quietly = TRUE)) > 13: doTryCatch(return(expr), name, parentenv, handler) > 14: tryCatchOne(expr, names, parentenv, handlers[[1L]]) > 15: tryCatchList(expr, classes, parentenv, handlers) > 16: tryCatch(expr, error = function(e) { call <- conditionCall(e) if > (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) > call <- sys.call(-4L) dcall <- deparse(call)[1L] prefix > <- paste("Error in", dcall, ": ") LONG <- 75L msg <- > conditionMessage(e) sm <- strsplit(msg, "\n")[[1L]] w <- 14L + > nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) > w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], > type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") > } else prefix <- "Error : " msg <- paste0(prefix, > conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if > (!silent && identical(getOption("show.error.messages"), TRUE)) { > cat(msg, file = outFile) .Internal(printDeferredWarnings()) } > invisible(structure(msg, class = "try-error", condition = e))}) > 17: try({ suppressPackageStartupMessages(.getRequiredPackages(quietly = > TRUE)) makeLazyLoading(pkg_name, lib, keep.source = keep.source)}) > 18: do_install_source(pkg_name, instdir, pkg, desc) > 19: do_install(pkg) > 20: tools:::.install_packages() > An irrecoverable exception occurred. R is aborting now ... > Segmentation fault > dh_auto_install: R CMD INSTALL -l > /<<PKGBUILDDIR>>/debian/r-cran-randomfields/usr/lib/R/site-library --clean . > "--built-timestamp='Sun, 08 Jan 2017 17:05:46 +0100'" returned exit code 139 > debian/rules:4: recipe for target 'binary' failed > make: *** [binary] Error 25 The full build log is available from: http://aws-logs.debian.net/2017/08/05/r-cran-randomfields_3.1.36-1_unstable.log A list of current common problems and possible solutions is available at http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute! About the archive rebuild: The rebuild was done on EC2 VM instances from Amazon Web Services, using a clean, minimal and up-to-date chroot. Every failed build was retried once to eliminate random failures.
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--- Begin Message ---Closing this bug since it was fixed with new upstream version but forgot to close in changelog. -- http://fam-tille.de
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