Dear Andreas, Yes, should be. But I noticed some other problems... I have made a version 1.0.2 addressing them. Then I synchronized the upstream branch accordingly, and then merged the master branch and the upstream branch, is that the correct way to do? Version 1.0.2-1 should then normally build fine.
I also committed a patch for bppsuite on x32 arch. Will now work on maffilter. Best, Julien. On Wed, Jul 19, 2017 at 6:15 PM, Andreas Tille <andr...@fam-tille.de> wrote: > Hi Julien, > > I guess this issue is connected to our latest changes in the library > packages. > > Kind regards > > Andreas. > > On Wed, Jul 19, 2017 at 05:52:18PM +0200, Lucas Nussbaum wrote: > > Source: physamp > > Version: 0.2.0-1 > > Severity: serious > > Tags: buster sid > > User: debian...@lists.debian.org > > Usertags: qa-ftbfs-20170719 qa-ftbfs > > Justification: FTBFS on amd64 > > > > Hi, > > > > During a rebuild of all packages in sid, your package failed to build on > > amd64. > > > > Relevant part (hopefully): > > > cd /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/physamp && /usr/bin/c++ > -Wall -Weffc++ -Wshadow -Wconversion -o > CMakeFiles/bppalnoptim.dir/AlignmentOptimizer.cpp.o > -c /<<PKGBUILDDIR>>/physamp/AlignmentOptimizer.cpp > > > /<<PKGBUILDDIR>>/physamp/AlignmentOptimizer.cpp:39:32: fatal error: > Bpp/Seq/Alphabet.all: No such file or directory > > > #include <Bpp/Seq/Alphabet.all> > > > ^ > > > compilation terminated. > > > physamp/CMakeFiles/bppalnoptim.dir/build.make:65: recipe for target > 'physamp/CMakeFiles/bppalnoptim.dir/AlignmentOptimizer.cpp.o' failed > > > make[3]: *** [physamp/CMakeFiles/bppalnoptim.dir/AlignmentOptimizer.cpp.o] > Error 1 > > > > The full build log is available from: > > http://aws-logs.debian.net/2017/07/19/physamp_0.2.0-1_unstable.log > > > > A list of current common problems and possible solutions is available at > > http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to > contribute! > > > > About the archive rebuild: The rebuild was done on EC2 VM instances from > > Amazon Web Services, using a clean, minimal and up-to-date chroot. Every > > failed build was retried once to eliminate random failures. > > > > _______________________________________________ > > Debian-med-packaging mailing list > > debian-med-packag...@lists.alioth.debian.org > > http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/ > debian-med-packaging > > > > -- > http://fam-tille.de > -- Julien Y. Dutheil, Ph-D 0 (+49) 6421 178 986 § Max Planck Institute for Evolutionary Biology Molecular Systems Evolution Department of Evolutionary Genetics Plön -- GERMANY § Institute of Evolutionary Sciences - Montpellier University of Montpellier 2 -- FRANCE
