Your message dated Wed, 21 Jun 2017 15:00:11 +0000 with message-id <e1dnh75-0007na...@fasolo.debian.org> and subject line Bug#864188: fixed in libbpp-core 2.3.1-1 has caused the Debian Bug report #864188, regarding libbpp-core2v5: symbols removed without soname bump to be marked as done.
This means that you claim that the problem has been dealt with. If this is not the case it is now your responsibility to reopen the Bug report if necessary, and/or fix the problem forthwith. (NB: If you are a system administrator and have no idea what this message is talking about, this may indicate a serious mail system misconfiguration somewhere. Please contact ow...@bugs.debian.org immediately.) -- 864188: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=864188 Debian Bug Tracking System Contact ow...@bugs.debian.org with problems
--- Begin Message ---Package: libbpp-core2v5 Version: 2.3.0-1~exp1 Severity: serious Control: affects -1 libbpp-seq9v5 src:libbpp-phyl 2.3.0-1~exp1 in unstable (sic) removes symbols without changing soname, causing the following FTBFS in libbpp-phyl: https://tests.reproducible-builds.org/debian/rb-pkg/unstable/amd64/libbpp-phyl.html ... [ 93%] Linking CXX executable test_bowker cd /build/1st/libbpp-phyl-2.2.0/obj-x86_64-linux-gnu/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_bowker.dir/link.txt --verbose=1 /usr/bin/c++ -Wall -Wshadow -Weffc++ -Wconversion -Wl,-z,relro CMakeFiles/test_bowker.dir/test_bowker.cpp.o -o test_bowker -rdynamic -lbpp-seq -lbpp-core -L../src -lbpp-phyl /usr/lib/gcc/x86_64-linux-gnu/6/../../../x86_64-linux-gnu/libbpp-seq.so: undefined reference to `bpp::RandomTools::lnGamma(double)' /usr/lib/gcc/x86_64-linux-gnu/6/../../../x86_64-linux-gnu/libbpp-seq.so: undefined reference to `bpp::TextTools::startsWith(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&)' /usr/lib/gcc/x86_64-linux-gnu/6/../../../x86_64-linux-gnu/libbpp-seq.so: undefined reference to `bpp::ApplicationTools::parameterExists(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, std::map<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::less<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >, std::allocator<std::pair<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > > > >&)' /usr/lib/gcc/x86_64-linux-gnu/6/../../../x86_64-linux-gnu/libbpp-seq.so: undefined reference to `bpp::ApplicationTools::getStringParameter(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, std::map<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::less<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >, std::allocator<std::pair<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > > > >&, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, bool, int)' collect2: error: ld returned 1 exit status test/CMakeFiles/test_bowker.dir/build.make:99: recipe for target 'test/test_bowker' failed make[3]: *** [test/test_bowker] Error 1
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--- Begin Message ---Source: libbpp-core Source-Version: 2.3.1-1 We believe that the bug you reported is fixed in the latest version of libbpp-core, which is due to be installed in the Debian FTP archive. A summary of the changes between this version and the previous one is attached. Thank you for reporting the bug, which will now be closed. If you have further comments please address them to 864...@bugs.debian.org, and the maintainer will reopen the bug report if appropriate. Debian distribution maintenance software pp. Andreas Tille <ti...@debian.org> (supplier of updated libbpp-core package) (This message was generated automatically at their request; if you believe that there is a problem with it please contact the archive administrators by mailing ftpmas...@ftp-master.debian.org) -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 1.8 Date: Tue, 13 Jun 2017 11:41:39 +0200 Source: libbpp-core Binary: libbpp-core-dev libbpp-core3 Architecture: source amd64 Version: 2.3.1-1 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team <debian-med-packag...@lists.alioth.debian.org> Changed-By: Andreas Tille <ti...@debian.org> Description: libbpp-core-dev - Bio++ Core library development files libbpp-core3 - Bio++ Core library Closes: 864188 Changes: libbpp-core (2.3.1-1) unstable; urgency=medium . * New upstream version Closes: #864188 * Install cmake files into development package Checksums-Sha1: 753ced4a455e0341f76fe60419b98b2ed6d02334 2091 libbpp-core_2.3.1-1.dsc 24890383aee7e9dafb0cdbbc2ed44ef56eb29158 326335 libbpp-core_2.3.1.orig.tar.gz e13cefc9e691008650dd857c194ef4680749a184 5180 libbpp-core_2.3.1-1.debian.tar.xz fda15ff50782ab444bc724e350d0d12c1b24f832 967100 libbpp-core-dev_2.3.1-1_amd64.deb a825040640e70da051f43ecf67c132944d404379 8465500 libbpp-core3-dbgsym_2.3.1-1_amd64.deb 32e34f15191e59db5c92fde243be40a7c6db274c 609972 libbpp-core3_2.3.1-1_amd64.deb ef195b4e6730b60b93e83c1dfb49e8757a73b6c9 6088 libbpp-core_2.3.1-1_amd64.buildinfo Checksums-Sha256: c6b1cb20727488f1871f3f4de82e9fa00a914a93180f5aa4f7452a267d01db80 2091 libbpp-core_2.3.1-1.dsc d3b9e510e224666d4c780f585e2db6a8f4c36eafe1c90230128d362e5a222880 326335 libbpp-core_2.3.1.orig.tar.gz 57194607dd2bba70a486134d8e077b4d37939d1ccf30e2e9aefae7acccece17f 5180 libbpp-core_2.3.1-1.debian.tar.xz 9850dd8fc5a0789fe1319a1eb45aa2bd7864a043a242df071da361aa99af51c3 967100 libbpp-core-dev_2.3.1-1_amd64.deb 40e1ae0a9d80818a56f7688da2c80ad801f5f5ac34f80d1049ed4d15a2dd8399 8465500 libbpp-core3-dbgsym_2.3.1-1_amd64.deb 6086752ef3f2d5d34266d1c037fce2540f4122c21ed88c1cca9acbad43bb9883 609972 libbpp-core3_2.3.1-1_amd64.deb fe89908ee953e9928cbf93246835352e288cb419d173db7c1748f94e1421bfcf 6088 libbpp-core_2.3.1-1_amd64.buildinfo Files: 21f8b2d715fd5dd6469976b27dfba423 2091 science optional libbpp-core_2.3.1-1.dsc 1455a0e7c54cbffddd1de12c87fa7500 326335 science optional libbpp-core_2.3.1.orig.tar.gz 45f2490da3a7c12111b40b391930d021 5180 science optional libbpp-core_2.3.1-1.debian.tar.xz 4d7115bfe67318e9a1117a6bac72aa2a 967100 libdevel optional libbpp-core-dev_2.3.1-1_amd64.deb 94e3624dd7936bbff875ab790b428250 8465500 debug extra libbpp-core3-dbgsym_2.3.1-1_amd64.deb a1f07ec08f08b9fcf90e6881f7b6edf2 609972 libs optional libbpp-core3_2.3.1-1_amd64.deb f8b939d992c3a3f7f551992c806a28e6 6088 science optional libbpp-core_2.3.1-1_amd64.buildinfo -----BEGIN PGP SIGNATURE----- Version: GnuPG v1 iQIcBAEBCAAGBQJZP8QTAAoJEFeKBJTRxkbRZXsP/RlGbsywNf4Vb3/Br/NR+nlm fgosawAAq/ZH2ktLUNNJDWyfMPHDhu8ApNs5lZmSDl8p46mRfnq31HYblAX9/eg7 kmfLygIyQBW+gXbKP65sPia6S62RyDIOsjPDFBZ8w/aQ9bLyVfwFoF4h16+cksob z1cRKFmUG8tEbrnrzkT/4vyhVf34sk/FGcw9gGubBr2rFehUaRJ9QzCSp6p6YSUK AuXnuPJluKIvoHFM/LUtuqUZeASnaTiWdnfBgyhWPENGJffS4zlNc1yiIEoEGWRn YNesAXuCzZUAjBKlFhNmEYI5CvsDJ92sFIhL7V0GhzuAkEP7jK8v5KJMXQ61s5ra SrZCkecBs4TM2k3k+TN6NyPEn7uD+ggIbVTIFZjPNqaBylANwHPFjFXuMZTugKtx HVAsKJUkgY8/mFHHXXGJJsHygNqtIDC4fqLSzwlvB3sp9iJWtDaLUlEArjENxDCH mHvb2R4zXHvLl3lt40JK59z0Xx0b/npho6pmi2Lt1gMuZkUgrmoWjyzjylPxTa8Z th0CH2a8ojtvaal4+FiUV0i/DPmNIYIki6lbqIdMG8ky6SCeSO35AEGBgDqUMhpr KbB2xCzP9KYRnjyRCQXEV87c8cnK9/Hp8PtXJeO+BDWfQDftDrmcwIDHqiD9l5Ko H5kTJOt3+6ssZP1prDa8 =mrtc -----END PGP SIGNATURE-----
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