Your message dated Sat, 03 Jun 2017 15:07:40 +0000
with message-id <e1dhaes-0000y4...@fasolo.debian.org>
and subject line Bug#864026: fixed in seqan2 2.3.1+dfsg-4
has caused the Debian Bug report #864026,
regarding seqan2: FTBFS when built with dpkg-buildpackage -A
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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--
864026: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=864026
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Package: src:seqan2
Version: 2.3.1+dfsg-3.1
Severity: serious
Tags: patch
Hello Chris.
I tried to build this package in stretch with "dpkg-buildpackage -A"
but it failed:
--------------------------------------------------------------------------------
[...]
dh_link
# Some binaries (eg. splazer) are not built in 32-bit architectures so
# remove their (broken) symlinks.
find /<<BUILDDIR>>/seqan2-2.3.1+dfsg/debian/seqan-apps/usr/bin -type l -xtype l
-delete
find: '/<<BUILDDIR>>/seqan2-2.3.1+dfsg/debian/seqan-apps/usr/bin': No such file
or directory
debian/rules:100: recipe for target 'override_dh_link' failed
make[1]: *** [override_dh_link] Error 1
make[1]: Leaving directory '/<<BUILDDIR>>/seqan2-2.3.1+dfsg'
debian/rules:45: recipe for target 'binary-indep' failed
make: *** [binary-indep] Error 2
dpkg-buildpackage: error: fakeroot debian/rules binary-indep gave error exit
status 2
--------------------------------------------------------------------------------
The patch below should fix this.
Thanks.
--- a/debian/rules
+++ b/debian/rules
@@ -96,7 +96,7 @@ override_dh_installman:
# we generate only those manpages where binaries are linked to /usr/bin
dh_installman
-override_dh_link:
+override_dh_link-arch:
dh_link
# Some binaries (eg. splazer) are not built in 32-bit architectures so
# remove their (broken) symlinks.
--- End Message ---
--- Begin Message ---
Source: seqan2
Source-Version: 2.3.1+dfsg-4
We believe that the bug you reported is fixed in the latest version of
seqan2, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 864...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Andreas Tille <ti...@debian.org> (supplier of updated seqan2 package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256
Format: 1.8
Date: Sat, 03 Jun 2017 16:15:29 +0200
Source: seqan2
Binary: seqan-apps libseqan2-dev
Architecture: source
Version: 2.3.1+dfsg-4
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team
<debian-med-packag...@lists.alioth.debian.org>
Changed-By: Andreas Tille <ti...@debian.org>
Description:
libseqan2-dev - C++ library for the analysis of biological sequences
(development
seqan-apps - C++ library for the analysis of biological sequences
Closes: 864026
Changes:
seqan2 (2.3.1+dfsg-4) unstable; urgency=medium
.
* Fix FTBFS when built with dpkg-buildpackage -A (thanks for the patch to
Santiago Vila <sanv...@debian.org>)
Closes: #864026
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