Your message dated Wed, 24 May 2017 09:33:59 +0000 with message-id <e1ddsg3-000g45...@fasolo.debian.org> and subject line Bug#863208: fixed in mash 1.1.1-2 has caused the Debian Bug report #863208, regarding mash sometimes FTBFS in parallel builds to be marked as done.
This means that you claim that the problem has been dealt with. If this is not the case it is now your responsibility to reopen the Bug report if necessary, and/or fix the problem forthwith. (NB: If you are a system administrator and have no idea what this message is talking about, this may indicate a serious mail system misconfiguration somewhere. Please contact ow...@bugs.debian.org immediately.) -- 863208: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=863208 Debian Bug Tracking System Contact ow...@bugs.debian.org with problems
--- Begin Message ---Source: mash Version: 1.1.1-1 Severity: serious Tags: patch https://buildd.debian.org/status/fetch.php?pkg=mash&arch=ppc64el&ver=1.1.1-1&stamp=1472296851&raw=0 ... dh_auto_build make -j4 make[2]: Entering directory '/«PKGBUILDDIR»' cd src/mash/capnp;export PATH=/usr/bin/:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games;capnp compile -I /usr/include -oc++ MinHash.capnp cd src/mash/capnp;export PATH=/usr/bin/:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games;capnp compile -I /usr/include -oc++ MinHash.capnp g++ -c -g -O2 -fdebug-prefix-map=/«PKGBUILDDIR»=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++11 -Isrc -I/usr/include -I /usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -o src/mash/capnp/MinHash.capnp.o src/mash/capnp/MinHash.capnp.c++ g++ -c -g -O2 -fdebug-prefix-map=/«PKGBUILDDIR»=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++11 -Isrc -I/usr/include -I /usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -o src/mash/Command.o src/mash/Command.cpp g++ -c -g -O2 -fdebug-prefix-map=/«PKGBUILDDIR»=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++11 -Isrc -I/usr/include -I /usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -o src/mash/CommandBounds.o src/mash/CommandBounds.cpp g++ -c -g -O2 -fdebug-prefix-map=/«PKGBUILDDIR»=. -fPIE -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++11 -Isrc -I/usr/include -I /usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -o src/mash/CommandContain.o src/mash/CommandContain.cpp src/mash/capnp/MinHash.capnp.c++:581:23: error: expected primary-expression at end of input 9, 0, 0, 0, 0, 0, 0, 0, ^ src/mash/capnp/MinHash.capnp.c++:581:23: error: expected ‘}’ at end of input src/mash/capnp/MinHash.capnp.c++:581:23: error: expected ‘}’ at end of input src/mash/capnp/MinHash.capnp.c++:581:23: error: expected ‘,’ or ‘;’ at end of input src/mash/capnp/MinHash.capnp.c++:581:23: error: expected ‘}’ at end of input src/mash/capnp/MinHash.capnp.c++:581:23: error: expected ‘}’ at end of input Makefile:47: recipe for target 'src/mash/capnp/MinHash.capnp.o' failed make[2]: *** [src/mash/capnp/MinHash.capnp.o] Error 1 This is caused by "capnp compile" running twice in parallel, fix is attached.Description: Fix parallel build failures "capnp compile" ran twice, and in parallel builds twice in parallel. This resulted in occasional build failures caused by corrupt output files. . Fix the Makefile to only run "capnp compile" once. Author: Adrian Bunk <b...@debian.org> --- mash-1.1.1.orig/Makefile.in +++ mash-1.1.1/Makefile.in @@ -46,7 +46,9 @@ libmash.a : $(OBJECTS) %.o : %.c++ $(CXX) -c $(CXXFLAGS) $(CPPFLAGS) -o $@ $< -src/mash/capnp/MinHash.capnp.c++ src/mash/capnp/MinHash.capnp.h : src/mash/capnp/MinHash.capnp +src/mash/capnp/MinHash.capnp.c++ : src/mash/capnp/MinHash.capnp.h + +src/mash/capnp/MinHash.capnp.h : src/mash/capnp/MinHash.capnp cd src/mash/capnp;export PATH=@capnp@/bin/:${PATH};capnp compile -I @capnp@/include -oc++ MinHash.capnp install : mash
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--- Begin Message ---Source: mash Source-Version: 1.1.1-2 We believe that the bug you reported is fixed in the latest version of mash, which is due to be installed in the Debian FTP archive. A summary of the changes between this version and the previous one is attached. Thank you for reporting the bug, which will now be closed. If you have further comments please address them to 863...@bugs.debian.org, and the maintainer will reopen the bug report if appropriate. Debian distribution maintenance software pp. Sascha Steinbiss <sa...@debian.org> (supplier of updated mash package) (This message was generated automatically at their request; if you believe that there is a problem with it please contact the archive administrators by mailing ftpmas...@ftp-master.debian.org) -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 1.8 Date: Wed, 24 May 2017 08:43:17 +0000 Source: mash Binary: mash libmash-dev mash-doc Architecture: source amd64 all Version: 1.1.1-2 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team <debian-med-packag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sa...@debian.org> Description: libmash-dev - development headers and static library for Mash mash - fast genome and metagenome distance estimation using MinHash mash-doc - documentation for Mash Closes: 863208 Changes: mash (1.1.1-2) unstable; urgency=medium . * Fix parallel building FTBFS. Thanks to Adrian Bunk for the patch. Closes: #863208 Checksums-Sha1: b3f191b32d5394488741810432a0d9d21fca8207 1781 mash_1.1.1-2.dsc 85617564274c2124e129308ef9ba0bde94e0aacc 2157580 mash_1.1.1-2.debian.tar.xz 8509705b6b78161c717fd7f402ff1b6ea8d03aaf 151344 libmash-dev_1.1.1-2_amd64.deb 727409d51ed555effbf81a73d7333174e0c89b4f 1972668 mash-dbgsym_1.1.1-2_amd64.deb 40dba52841dd87c70cc1cd39f9fe0f609dd6f449 72428 mash-doc_1.1.1-2_all.deb 4d4e7738418c4f3523a0e67b9f625bd2b91845e6 7353 mash_1.1.1-2_amd64.buildinfo 164eefc566a694d38d0bc040928054c144cdb3b3 126118 mash_1.1.1-2_amd64.deb Checksums-Sha256: 1ab30ffa320eb46a6bf823875d6d8c3517321650ac3c6f475b1892363c0a7594 1781 mash_1.1.1-2.dsc 2ac7891c9f0031ee313ee6c20531d79f12c2b2f54370a8848b2eaa79b4c7fa74 2157580 mash_1.1.1-2.debian.tar.xz 5d6b3194372376dce89f72b75b1f43dcac687e10007ae2f6637facba6c550368 151344 libmash-dev_1.1.1-2_amd64.deb 5ed8e9230d7ec7ad57fce4b7dbe7858205990cb4373a63806af6eabc7041dd1d 1972668 mash-dbgsym_1.1.1-2_amd64.deb 709d578a085f9da9a2a55bb3b9145b52dcd3b1cef29160401c25a63a38b0b106 72428 mash-doc_1.1.1-2_all.deb 85c98304aa6e4f164f7307117a1178e199bc1a92d4069fed3b6650be778822ed 7353 mash_1.1.1-2_amd64.buildinfo 82d77807a40c36aab1b7e2c60cbc912f1de33f6b177a30a811bf62e0d8966ac9 126118 mash_1.1.1-2_amd64.deb Files: 12da1681f79540bc7793f6159a2a427d 1781 science optional mash_1.1.1-2.dsc eae33e0c5a8f8b537cef998b016c55a4 2157580 science optional mash_1.1.1-2.debian.tar.xz 5da787a0a2fa3ef728f41c0913f31fbf 151344 libdevel optional libmash-dev_1.1.1-2_amd64.deb c2781e100597eebe4eb91407709a6569 1972668 debug extra mash-dbgsym_1.1.1-2_amd64.deb 472f313afb613edcea92cbffec03338c 72428 doc optional mash-doc_1.1.1-2_all.deb 923b32c03323b25f8da77504a54d5438 7353 science optional mash_1.1.1-2_amd64.buildinfo 630a40ec8d5fdcaebe32a400fcfa85f1 126118 science optional mash_1.1.1-2_amd64.deb -----BEGIN PGP SIGNATURE----- iQEzBAEBCAAdFiEEhFH5F4Fy5+Lcc/eVUfhKj+zKfgkFAlklTGgACgkQUfhKj+zK fgnKwggApPyZIrPU8NLr9GlcbpcD96OTkH5xBors+aw3Pkpx/yb/tgyo58CtwL0U UpnmfxLn+w3S1xxn6arfiY6fKX21EGVW1fSsAH7X9k25sYi20YIP+K2roryO/85k 0CEvS67Yir0mXp4I23+CbZ8xIJXjZzv7tbRJhwb7IaYNJ5IddJaShhLfhN0uHW7f JkvHBu+OCpVlL9L6pwOWd9gk0g9ym5Gr3le+aKPI4nBd4veP43Vpl4geECYoj49X ffzJ53MJfKEU3dUTKvttAzj/C0fQx0gYRwzLsVI1m+zApMZz0CeUWCEWopIRPABI o8vY5kx6hoPeraicoYWJ5FIc3o0rgQ== =aRnI -----END PGP SIGNATURE-----
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