Your message dated Wed, 26 Apr 2017 15:07:59 +0000
with message-id <e1d3oxv-0007gl...@fasolo.debian.org>
and subject line Bug#860624: fixed in python-multipletau 0.1.7+ds-1
has caused the Debian Bug report #860624,
regarding python-multipletau: FTBFS on i386: dh_auto_test: pybuild --test -i 
python{version} -p 2.7 returned exit code 13
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
860624: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=860624
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: python-multipletau
Version: 0.1.6+ds-1
Severity: serious
Tags: stretch sid
User: debian...@lists.debian.org
Usertags: qa-ftbfs-20170418-i386 qa-ftbfs
Justification: FTBFS in stretch on i386

Hi,

During a rebuild of all packages in stretch (in a stretch chroot, not a
sid chroot), your package failed to build on i386.

Relevant part (hopefully):
> make[1]: Entering directory '/<<BUILDDIR>>/python-multipletau-0.1.6+ds'
> dh_auto_build
> I: pybuild base:184: /usr/bin/python setup.py build 
> /usr/lib/python2.7/dist-packages/setuptools/dist.py:333: UserWarning: 
> Normalizing '2016.07.11.dev18' to '2016.7.11.dev18'
>   normalized_version,
> running build
> running build_py
> creating 
> /<<BUILDDIR>>/python-multipletau-0.1.6+ds/.pybuild/pythonX.Y_2.7/build/multipletau
> copying multipletau/_version.py -> 
> /<<BUILDDIR>>/python-multipletau-0.1.6+ds/.pybuild/pythonX.Y_2.7/build/multipletau
> copying multipletau/_multipletau.py -> 
> /<<BUILDDIR>>/python-multipletau-0.1.6+ds/.pybuild/pythonX.Y_2.7/build/multipletau
> copying multipletau/__init__.py -> 
> /<<BUILDDIR>>/python-multipletau-0.1.6+ds/.pybuild/pythonX.Y_2.7/build/multipletau
> copying multipletau/_version_save.py -> 
> /<<BUILDDIR>>/python-multipletau-0.1.6+ds/.pybuild/pythonX.Y_2.7/build/multipletau
> I: pybuild base:184: /usr/bin/python3 setup.py build 
> running build
> running build_py
> creating 
> /<<BUILDDIR>>/python-multipletau-0.1.6+ds/.pybuild/pythonX.Y_3.5/build/multipletau
> copying multipletau/_version.py -> 
> /<<BUILDDIR>>/python-multipletau-0.1.6+ds/.pybuild/pythonX.Y_3.5/build/multipletau
> copying multipletau/_multipletau.py -> 
> /<<BUILDDIR>>/python-multipletau-0.1.6+ds/.pybuild/pythonX.Y_3.5/build/multipletau
> copying multipletau/__init__.py -> 
> /<<BUILDDIR>>/python-multipletau-0.1.6+ds/.pybuild/pythonX.Y_3.5/build/multipletau
> copying multipletau/_version_save.py -> 
> /<<BUILDDIR>>/python-multipletau-0.1.6+ds/.pybuild/pythonX.Y_3.5/build/multipletau
> /usr/lib/python3/dist-packages/setuptools/dist.py:333: UserWarning: 
> Normalizing '2016.07.11.dev18' to '2016.7.11.dev18'
>   normalized_version,
> PYTHONPATH=. http_proxy='127.0.0.1:9' sphinx-build -N -bhtml doc/ build/html
> Running Sphinx v1.4.9
> making output directory...
> loading pickled environment... not yet created
> loading intersphinx inventory from 
> http://docs.scipy.org/doc/scipy/reference/objects.inv...
> WARNING: intersphinx inventory 
> 'http://docs.scipy.org/doc/scipy/reference/objects.inv' not fetchable due to 
> <class 'urllib2.URLError'>: <urlopen error [Errno 111] Connection refused>
> loading intersphinx inventory from 
> http://docs.scipy.org/doc/numpy/objects.inv...
> WARNING: intersphinx inventory 'http://docs.scipy.org/doc/numpy/objects.inv' 
> not fetchable due to <class 'urllib2.URLError'>: <urlopen error [Errno 111] 
> Connection refused>
> loading intersphinx inventory from http://docs.python.org/2.7/objects.inv...
> WARNING: intersphinx inventory 'http://docs.python.org/2.7/objects.inv' not 
> fetchable due to <class 'urllib2.URLError'>: <urlopen error [Errno 111] 
> Connection refused>
> building [mo]: targets for 0 po files that are out of date
> building [html]: targets for 1 source files that are out of date
> updating environment: 1 added, 0 changed, 0 removed
> reading sources... [100%] index
> 
> looking for now-outdated files... none found
> pickling environment... done
> checking consistency... done
> preparing documents... done
> writing output... [100%] index
> 
> generating indices... genindex py-modindex
> highlighting module code... [100%] multipletau._multipletau
> 
> writing additional pages... search
> copying images... [100%] ../examples/compare_correlation_methods.png
> 
> copying downloadable files... [100%] examples/compare_correlation_methods.py
> 
> copying static files... done
> copying extra files... done
> dumping search index in English (code: en) ... done
> dumping object inventory... done
> build succeeded, 3 warnings.
> # see d/patches/packaged-mathjax.path 
> # Link mathjax in _static
> ln -s /usr/share/javascript/mathjax \
>       build/html/_static/mathjax
> make[1]: Leaving directory '/<<BUILDDIR>>/python-multipletau-0.1.6+ds'
>    dh_auto_test -O--buildsystem=pybuild
> I: pybuild base:184: cd 
> /<<BUILDDIR>>/python-multipletau-0.1.6+ds/.pybuild/pythonX.Y_2.7/build; 
> python2.7 -m pytest tests
> ============================= test session starts 
> ==============================
> platform linux2 -- Python 2.7.13, pytest-3.0.6, py-1.4.32, pluggy-0.4.0
> rootdir: /<<BUILDDIR>>/python-multipletau-0.1.6+ds, inifile: 
> collected 23 items
> 
> tests/test_ac_cc.py ...
> tests/test_autocorrelate.py FFF...
> tests/test_basic.py ..
> tests/test_correlate.py FFF....
> tests/test_ref_numpy.py FFFFF
> 
> =================================== FAILURES 
> ===================================
> ________________________________ test_ac_simple 
> ________________________________
> 
>     def test_ac_simple():
>         myframe = sys._getframe()
>         myname = myframe.f_code.co_name
>         print("running ", myname)
>     
>         arrs = get_sample_arrays()
>     
>         res = []
>         for a in arrs:
>             r = multipletau.autocorrelate(a=a,
>                                           m=16,
>                                           deltat=1,
>                                           normalize=False,
>                                           copy=True,
>                                           dtype=np.float)
>             res.append(r)
>     
>         res = np.concatenate(res)
>         
> #np.save(os.path.dirname(__file__)+"/data/"+os.path.basename(__file__)+"_"+myname+".npy",
>  res)
>         ref = get_reference_data(myname, __file__)
>     
> >       assert np.all(res==ref)
> E       assert False
> E        +  where False = <function all at 0xf62f16bc>(array([[  
> 0.0...4640390e+21]]) == array([[  0.00...4640390e+21]])
> E        +    where <function all at 0xf62f16bc> = np.all
> E           Use -v to get the full diff)
> 
> tests/test_autocorrelate.py:65: AssertionError
> ----------------------------- Captured stdout call 
> -----------------------------
> running  test_ac_simple
> ______________________________ test_ac_normalize 
> _______________________________
> 
>     def test_ac_normalize():
>         myframe = sys._getframe()
>         myname = myframe.f_code.co_name
>         print("running ", myname)
>     
>         arrs = get_sample_arrays()
>     
>         res = []
>         for a in arrs:
>             r = multipletau.autocorrelate(a=a,
>                                           m=16,
>                                           deltat=1,
>                                           normalize=True,
>                                           copy=True,
>                                           dtype=np.float)
>             res.append(r)
>     
>         res = np.concatenate(res)
>         
> #np.save(os.path.dirname(__file__)+"/data/"+os.path.basename(__file__)+"_"+myname+".npy",
>  res)
>         ref = get_reference_data(myname, __file__)
>     
> >       assert np.all(res==ref)
> E       assert False
> E        +  where False = <function all at 0xf62f16bc>(array([[  
> 0.0...9496198e+00]]) == array([[  0.00...9496198e+00]])
> E        +    where <function all at 0xf62f16bc> = np.all
> E           Use -v to get the full diff)
> 
> tests/test_autocorrelate.py:89: AssertionError
> ----------------------------- Captured stdout call 
> -----------------------------
> running  test_ac_normalize
> __________________________________ test_ac_m 
> ___________________________________
> 
>     def test_ac_m():
>         myframe = sys._getframe()
>         myname = myframe.f_code.co_name
>         print("running ", myname)
>     
>         arrs = get_sample_arrays()
>     
>         ms = [8, 16, 32, 64, 128]
>         a = np.concatenate(arrs)
>     
>         res = []
>         for m in ms:
>             r = multipletau.autocorrelate(a=a,
>                                           m=m,
>                                           deltat=1,
>                                           normalize=False,
>                                           copy=True,
>                                           dtype=np.float)
>             res.append(r)
>     
>             # test minimal length of array
>             _r2 = multipletau.autocorrelate(a=a[:2*m],
>                                             m=m,
>                                             deltat=1,
>                                             normalize=False,
>                                             copy=True,
>                                             dtype=np.float)
>     
>         res = np.concatenate(res)
>         
> #np.save(os.path.dirname(__file__)+"/data/"+os.path.basename(__file__)+"_"+myname+".npy",
>  res)
>         ref = get_reference_data(myname, __file__)
>     
> >       assert np.all(res==ref)
> E       assert False
> E        +  where False = <function all at 0xf62f16bc>(array([[  
> 0.0...0955749e+28]]) == array([[  0.00...0955749e+28]])
> E        +    where <function all at 0xf62f16bc> = np.all
> E           Use -v to get the full diff)
> 
> tests/test_autocorrelate.py:124: AssertionError
> ----------------------------- Captured stdout call 
> -----------------------------
> running  test_ac_m
> ________________________________ test_cc_simple 
> ________________________________
> 
>     def test_cc_simple():
>         myframe = sys._getframe()
>         myname = myframe.f_code.co_name
>         print("running ", myname)
>     
>         arrs = get_sample_arrays_cplx()
>     
>         res = []
>         for a in arrs:
>             r = multipletau.correlate(a=a,
>                                       v=a,
>                                       m=16,
>                                       deltat=1,
>                                       normalize=False,
>                                       copy=True,
>                                       dtype=np.complex)
>             res.append(r)
>         res = np.concatenate(res)
>     
>         
> #np.save(os.path.dirname(__file__)+"/data/"+os.path.basename(__file__)+"_"+myname+".npy",
>  res)
>         ref = get_reference_data(myname, __file__)
>     
> >       assert np.all(res==ref)
> E       assert False
> E        +  where False = <function all at 0xf62f16bc>(array([[  
> 0.0...031106e+14j]]) == array([[  0.00...031106e+14j]])
> E        +    where <function all at 0xf62f16bc> = np.all
> E           Use -v to get the full diff)
> 
> tests/test_correlate.py:64: AssertionError
> ----------------------------- Captured stdout call 
> -----------------------------
> running  test_cc_simple
> ______________________________ test_cc_normalize 
> _______________________________
> 
>     def test_cc_normalize():
>         myframe = sys._getframe()
>         myname = myframe.f_code.co_name
>         print("running ", myname)
>     
>         arrs = get_sample_arrays_cplx()
>     
>         res = []
>         for a in arrs:
>             r = multipletau.correlate(a=a.real,
>                                       v=a.imag,
>                                       m=16,
>                                       deltat=1,
>                                       normalize=True,
>                                       copy=True,
>                                       dtype=np.float)
>             res.append(r)
>     
>         res = np.concatenate(res)
>         
> #np.save(os.path.dirname(__file__)+"/data/"+os.path.basename(__file__)+"_"+myname+".npy",
>  res)
>         ref = get_reference_data(myname, __file__)
>     
> >       assert np.all(res==ref)
> E       assert False
> E        +  where False = <function all at 0xf62f16bc>(array([[  
> 0.0...8489514e-01]]) == array([[  0.00...8489514e-01]])
> E        +    where <function all at 0xf62f16bc> = np.all
> E           Use -v to get the full diff)
> 
> tests/test_correlate.py:103: AssertionError
> ----------------------------- Captured stdout call 
> -----------------------------
> running  test_cc_normalize
> __________________________________ test_cc_m 
> ___________________________________
> 
>     def test_cc_m():
>         myframe = sys._getframe()
>         myname = myframe.f_code.co_name
>         print("running ", myname)
>     
>         arrs = get_sample_arrays_cplx()
>     
>         ms = [4, 8, 10, 16, 20, 64, 128]
>         a = np.concatenate(arrs)
>     
>         res = []
>         for m in ms:
>             r = multipletau.correlate(a=a,
>                                       v=a,
>                                       m=m,
>                                       deltat=1,
>                                       normalize=False,
>                                       copy=True,
>                                       dtype=np.complex)
>             res.append(r)
>     
>             # test minimal length of array
>             _r2 = multipletau.correlate(a=a[:2*m],
>                                         v=a[:2*m],
>                                         m=m,
>                                         deltat=1,
>                                         normalize=False,
>                                         copy=True,
>                                         dtype=np.complex)
>     
>         res = np.concatenate(res)
>         
> #np.save(os.path.dirname(__file__)+"/data/"+os.path.basename(__file__)+"_"+myname+".npy",
>  res)
>         ref = get_reference_data(myname, __file__)
>     
> >       assert np.all(res==ref)
> E       assert False
> E        +  where False = <function all at 0xf62f16bc>(array([[  
> 0.0...005901e+18j]]) == array([[  0.00...005901e+18j]])
> E        +    where <function all at 0xf62f16bc> = np.all
> E           Use -v to get the full diff)
> 
> tests/test_correlate.py:140: AssertionError
> ----------------------------- Captured stdout call 
> -----------------------------
> running  test_cc_m
> _____________________________ test_corresponds_ac 
> ______________________________
> 
>     def test_corresponds_ac():
>         myframe = sys._getframe()
>         myname = myframe.f_code.co_name
>         print("running ", myname)
>     
>         a = np.concatenate(get_sample_arrays_cplx()).real
>         m=16
>     
>         restau = multipletau.autocorrelate(a=1*a,
>                                            m=m,
>                                            copy=True,
>                                            normalize=True,
> >                                          dtype=np.float128)
> E       AttributeError: 'module' object has no attribute 'float128'
> 
> tests/test_ref_numpy.py:30: AttributeError
> ----------------------------- Captured stdout call 
> -----------------------------
> ('running ', 'test_corresponds_ac')
> _______________________ test_corresponds_ac_nonormalize 
> ________________________
> 
>     def test_corresponds_ac_nonormalize():
>         myframe = sys._getframe()
>         myname = myframe.f_code.co_name
>         print("running ", myname)
>     
>         a = np.concatenate(get_sample_arrays_cplx()).real
>         m=16
>     
>         restau = multipletau.autocorrelate(a=1*a,
>                                            m=m,
>                                            copy=True,
>                                            normalize=False,
> >                                          dtype=np.float128)
> E       AttributeError: 'module' object has no attribute 'float128'
> 
> tests/test_ref_numpy.py:55: AttributeError
> ----------------------------- Captured stdout call 
> -----------------------------
> ('running ', 'test_corresponds_ac_nonormalize')
> _____________________________ test_corresponds_cc 
> ______________________________
> 
>     def test_corresponds_cc():
>         myframe = sys._getframe()
>         myname = myframe.f_code.co_name
>         print("running ", myname)
>     
>         a = np.concatenate(get_sample_arrays_cplx())
>         m=16
>     
>         restau = multipletau.correlate(a=a,
>                                        v=a.imag+1j*a.real,
>                                        m=m,
>                                        copy=True,
>                                        normalize=True,
> >                                      dtype=np.complex256)
> E       AttributeError: 'module' object has no attribute 'complex256'
> 
> tests/test_ref_numpy.py:81: AttributeError
> ----------------------------- Captured stdout call 
> -----------------------------
> ('running ', 'test_corresponds_cc')
> _______________________ test_corresponds_cc_nonormalize 
> ________________________
> 
>     def test_corresponds_cc_nonormalize():
>         myframe = sys._getframe()
>         myname = myframe.f_code.co_name
>         print("running ", myname)
>     
>         a = np.concatenate(get_sample_arrays_cplx())
>         m=16
>     
>         restau = multipletau.correlate(a=a,
>                                        v=a.imag+1j*a.real,
>                                        m=m,
>                                        copy=True,
>                                        normalize=False,
> >                                      dtype=np.complex256)
> E       AttributeError: 'module' object has no attribute 'complex256'
> 
> tests/test_ref_numpy.py:107: AttributeError
> ----------------------------- Captured stdout call 
> -----------------------------
> ('running ', 'test_corresponds_cc_nonormalize')
> ________________________ test_corresponds_ac_first_loop 
> ________________________
> 
>     def test_corresponds_ac_first_loop():
>         """
>         numpy correlation:
>         G_m = sum_i(a_i*a_{i+m})
>     
>         multipletau correlation 2nd order:
>         b_j = (a_{2i} + a_{2i+1} / 2)
>         G_m = sum_j(b_j*b_{j+1})
>             = 1/4*sum_i(a_{2i}   * a_{2i+m}   +
>                         a_{2i}   * a_{2i+m+1} +
>                         a_{2i+1} * a_{2i+m}   +
>                         a_{2i+1} * a_{2i+m+1}
>                         )
>     
>         The values after the first m+1 lag times in the multipletau
>         correlation differ from the normal correlation, because the
>         traces are averaged over two consecutive items, effectively
>         halving the size of the trace. The multiple-tau correlation
>         can be compared to the regular correlation by using an even
>         sized sequence (here 222) in which the elements 2i and 2i+1
>         are equal, as is done in this test.
>         """
>         myframe = sys._getframe()
>         myname = myframe.f_code.co_name
>         print("running ", myname)
>     
>         a = [ arr / np.average(arr) for arr in get_sample_arrays_cplx() ]
>         a = np.concatenate(a)[:222]
>         # two consecutive elements are the same, so the multiple-tau method
>         # corresponds to the numpy correlation for the first loop.
>         a[::2] = a[1::2]
>     
>         for m in [2,4,6,8,10,12,14,16]:
>             restau = multipletau.correlate(a=a,
>                                            v=a.imag+1j*a.real,
>                                            m=m,
>                                            copy=True,
>                                            normalize=False,
> >                                          dtype=np.complex256)
> E           AttributeError: 'module' object has no attribute 'complex256'
> 
> tests/test_ref_numpy.py:158: AttributeError
> ----------------------------- Captured stdout call 
> -----------------------------
> ('running ', 'test_corresponds_ac_first_loop')
> ===================== 11 failed, 12 passed in 0.50 seconds 
> =====================
> E: pybuild pybuild:283: test: plugin distutils failed with: exit code=1: cd 
> /<<BUILDDIR>>/python-multipletau-0.1.6+ds/.pybuild/pythonX.Y_2.7/build; 
> python2.7 -m pytest tests
> dh_auto_test: pybuild --test -i python{version} -p 2.7 returned exit code 13

The full build log is available from:
   
http://aws-logs.debian.net/2017/04/18/python-multipletau_0.1.6+ds-1_testing-i386.log

A list of current common problems and possible solutions is available at
http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute!

About the archive rebuild: The rebuild was done on EC2 VM instances from
Amazon Web Services, using a clean, minimal and up-to-date chroot. Every
failed build was retried once to eliminate random failures.

--- End Message ---
--- Begin Message ---
Source: python-multipletau
Source-Version: 0.1.7+ds-1

We believe that the bug you reported is fixed in the latest version of
python-multipletau, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 860...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Alexandre Mestiashvili <a...@biotec.tu-dresden.de> (supplier of updated 
python-multipletau package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)


-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256

Format: 1.8
Date: Wed, 26 Apr 2017 15:00:54 +0200
Source: python-multipletau
Binary: python-multipletau python3-multipletau python-multipletau-doc
Architecture: source all
Version: 0.1.7+ds-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team 
<debian-med-packag...@lists.alioth.debian.org>
Changed-By: Alexandre Mestiashvili <a...@biotec.tu-dresden.de>
Description:
 python-multipletau - multiple-tau algorithm for Python/NumPy
 python-multipletau-doc - documentation for multipletau Python module
 python3-multipletau - multiple-tau algorithm for Python3/NumPy
Closes: 860624
Changes:
 python-multipletau (0.1.7+ds-1) unstable; urgency=medium
 .
   * New upstream version 0.1.7+ds (Closes: #860624)
   * Remove trailing whitespaces from changelog
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python-multipletau_0.1.7+ds-1_all.deb
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python-multipletau_0.1.7+ds-1_amd64.buildinfo
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python3-multipletau_0.1.7+ds-1_all.deb
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python-multipletau_0.1.7+ds-1.dsc
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python-multipletau_0.1.7+ds.orig.tar.gz
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python-multipletau_0.1.7+ds-1.debian.tar.xz
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python-multipletau-doc_0.1.7+ds-1_all.deb
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python-multipletau_0.1.7+ds-1_all.deb
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python-multipletau_0.1.7+ds-1_amd64.buildinfo
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python3-multipletau_0.1.7+ds-1_all.deb

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