Your message dated Wed, 18 Jan 2017 22:04:34 +0000 with message-id <e1ctylk-0003hv...@fasolo.debian.org> and subject line Bug#851726: fixed in liggghts 3.5.0+repack1-9 has caused the Debian Bug report #851726, regarding liggghts: FTBFS on single-CPU machines (not enough slots available) to be marked as done.
This means that you claim that the problem has been dealt with. If this is not the case it is now your responsibility to reopen the Bug report if necessary, and/or fix the problem forthwith. (NB: If you are a system administrator and have no idea what this message is talking about, this may indicate a serious mail system misconfiguration somewhere. Please contact ow...@bugs.debian.org immediately.) -- 851726: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=851726 Debian Bug Tracking System Contact ow...@bugs.debian.org with problems
--- Begin Message ---Package: src:liggghts Version: 3.5.0+repack1-8 Severity: serious Dear maintainer: I tried to build this package in stretch with "dpkg-buildpackage -A" but it failed: -------------------------------------------------------------------------------- [...] debian/rules build-indep dh build-indep --buildsystem=cmake --builddirectory=/<<BUILDDIR>>/liggghts-3.5.0+repack1/debian/build --parallel dh_testdir -i -O--buildsystem=cmake -O--builddirectory=/<<BUILDDIR>>/liggghts-3.5.0\+repack1/debian/build -O--parallel dh_update_autotools_config -i -O--buildsystem=cmake -O--builddirectory=/<<BUILDDIR>>/liggghts-3.5.0\+repack1/debian/build -O--parallel dh_auto_configure -i -O--buildsystem=cmake -O--builddirectory=/<<BUILDDIR>>/liggghts-3.5.0\+repack1/debian/build -O--parallel cmake ../.. -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -- The C compiler identification is GNU 6.2.1 -- The CXX compiler identification is GNU 6.2.1 -- Check for working C compiler: /usr/bin/cc -- Check for working C compiler: /usr/bin/cc -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Detecting C compile features -- Detecting C compile features - done [... snipped ...] cd /<<BUILDDIR>>/liggghts-3.5.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/x86_64-linux-gnu -I/usr/include/eigen3 -I/<<BUILDDIR>>/liggghts-3.5.0+repack1 -I/<<BUILDDIR>>/liggghts-3.5.0+repack1/src -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/liggghts-3.5.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/write_dump.cpp.o -c /<<BUILDDIR>>/liggghts-3.5.0+repack1/src/write_dump.cpp [ 98%] Building CXX object src/CMakeFiles/libliggghts.dir/write_restart.cpp.o cd /<<BUILDDIR>>/liggghts-3.5.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/x86_64-linux-gnu -I/usr/include/eigen3 -I/<<BUILDDIR>>/liggghts-3.5.0+repack1 -I/<<BUILDDIR>>/liggghts-3.5.0+repack1/src -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/liggghts-3.5.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/write_restart.cpp.o -c /<<BUILDDIR>>/liggghts-3.5.0+repack1/src/write_restart.cpp [ 99%] Linking CXX shared library libliggghts.so cd /<<BUILDDIR>>/liggghts-3.5.0+repack1/debian/build/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/libliggghts.dir/link.txt --verbose=1 /usr/bin/mpicxx -fPIC -g -O2 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enderingVolume-6.3.so.6.3.0 -lexpat /usr/lib/x86_64-linux-gnu/libvtkRenderingOpenGL-6.3.so.6.3.0 /usr/lib/x86_64-linux-gnu/libvtkIOParallelXML-6.3.so.6.3.0 /usr/lib/x86_64-linux-gnu/libvtkParallelCore-6.3.so.6.3.0 /usr/lib/x86_64-linux-gnu/libvtkRenderingContext2D-6.3.so.6.3.0 /usr/lib/x86_64-linux-gnu/libvtkImagingSources-6.3.so.6.3.0 /usr/lib/x86_64-linux-gnu/libvtkRenderingFreeType-6.3.so.6.3.0 /usr/lib/x86_64-linux-gnu/libvtkftgl-6.3.so.6.3.0 -lfreetype /usr/lib/x86_64-linux-gnu/libvtkRenderingCore-6.3.so.6.3.0 /usr/lib/x86_64-linux-gnu/libvtkCommonColor-6.3.so.6.3.0 /usr/lib/x86_64-linux-gnu/libvtkFiltersExtraction-6.3.so.6.3.0 /usr/lib/x86_64-linux-gnu/libvtkFiltersStatistics-6.3.so.6.3.0 /usr/lib/x86_64-linux-gnu/libvtkImagingFourier-6.3.so.6.3.0 /usr/lib/x86_64-linux-gnu/libvtkalglib-6.3.so.6.3.0 /usr/lib/x86_64-linux-gnu/libvtkFiltersGeometry-6.3.so.6.3.0 /usr/lib/x86_64-linux-gnu/libvtkFiltersSources-6.3.so.6.3.0 /usr/lib/x86_64-linux-gnu/libvtkFiltersGeneral-6.3.so.6.3.0 /usr/lib/x86_64-linux-gnu/libvtkFiltersCore-6.3.so.6.3.0 /usr/lib/x86_64-linux-gnu/libvtkCommonComputationalGeometry-6.3.so.6.3.0 /usr/lib/x86_64-linux-gnu/libvtkImagingHybrid-6.3.so.6.3.0 /usr/lib/x86_64-linux-gnu/libvtkImagingCore-6.3.so.6.3.0 /usr/lib/x86_64-linux-gnu/libvtkIOImage-6.3.so.6.3.0 /usr/lib/x86_64-linux-gnu/libvtkDICOMParser-6.3.so.6.3.0 /usr/lib/x86_64-linux-gnu/libvtkmetaio-6.3.so.6.3.0 -lz -lGLU -lGL -lSM -lICE -lX11 -lXext -lXt /usr/lib/x86_64-linux-gnu/libvtkIOXML-6.3.so.6.3.0 /usr/lib/x86_64-linux-gnu/libvtkIOGeometry-6.3.so.6.3.0 /usr/lib/x86_64-linux-gnu/libvtkIOXMLParser-6.3.so.6.3.0 /usr/lib/x86_64-linux-gnu/libvtkIOLegacy-6.3.so.6.3.0 /usr/lib/x86_64-linux-gnu/libvtkIOCore-6.3.so.6.3.0 /usr/lib/x86_64-linux-gnu/libvtkCommonExecutionModel-6.3.so.6.3.0 /usr/lib/x86_64-linux-gnu/libvtkCommonDataModel-6.3.so.6.3.0 /usr/lib/x86_64-linux-gnu/libvtkCommonMisc-6.3.so.6.3.0 /usr/lib/x86_64-linux-gnu/libvtkCommonSystem-6.3.so.6.3.0 /usr/lib/x86_64-linux-gnu/libvtksy s-6.3.so.6.3.0 -ldl /usr/lib/x86_64-linux-gnu/libvtkCommonTransforms-6.3.so.6.3.0 /usr/lib/x86_64-linux-gnu/libvtkCommonMath-6.3.so.6.3.0 /usr/lib/x86_64-linux-gnu/libvtkCommonCore-6.3.so.6.3.0 cd /<<BUILDDIR>>/liggghts-3.5.0+repack1/debian/build/src && /usr/bin/cmake -E cmake_symlink_library libliggghts.so.3.3.1 libliggghts.so.3 libliggghts.so make[3]: Leaving directory '/<<BUILDDIR>>/liggghts-3.5.0+repack1/debian/build' [ 99%] Built target libliggghts make -f src/CMakeFiles/liggghts.dir/build.make src/CMakeFiles/liggghts.dir/depend make[3]: Entering directory '/<<BUILDDIR>>/liggghts-3.5.0+repack1/debian/build' cd /<<BUILDDIR>>/liggghts-3.5.0+repack1/debian/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/liggghts-3.5.0+repack1 /<<BUILDDIR>>/liggghts-3.5.0+repack1/src /<<BUILDDIR>>/liggghts-3.5.0+repack1/debian/build /<<BUILDDIR>>/liggghts-3.5.0+repack1/debian/build/src /<<BUILDDIR>>/liggghts-3.5.0+repack1/debian/build/src/CMakeFiles/liggghts.dir/DependInfo.cmake --color= Scanning dependencies of target liggghts make[3]: Leaving directory '/<<BUILDDIR>>/liggghts-3.5.0+repack1/debian/build' make -f src/CMakeFiles/liggghts.dir/build.make src/CMakeFiles/liggghts.dir/build make[3]: Entering directory '/<<BUILDDIR>>/liggghts-3.5.0+repack1/debian/build' [ 99%] Building CXX object src/CMakeFiles/liggghts.dir/main.cpp.o cd /<<BUILDDIR>>/liggghts-3.5.0+repack1/debian/build/src && /usr/bin/mpicxx -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/x86_64-linux-gnu -I/usr/include/eigen3 -I/<<BUILDDIR>>/liggghts-3.5.0+repack1 -I/<<BUILDDIR>>/liggghts-3.5.0+repack1/src -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/liggghts-3.5.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -o CMakeFiles/liggghts.dir/main.cpp.o -c /<<BUILDDIR>>/liggghts-3.5.0+repack1/src/main.cpp [100%] Linking CXX executable liggghts cd /<<BUILDDIR>>/liggghts-3.5.0+repack1/debian/build/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/liggghts.dir/link.txt --verbose=1 /usr/bin/mpicxx -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/liggghts-3.5.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -Wl,-z,relro -Wl,--as-needed CMakeFiles/liggghts.dir/main.cpp.o -o liggghts -Wl,-rpath,/<<BUILDDIR>>/liggghts-3.5.0+repack1/debian/build/src: -rdynamic libliggghts.so.3.3.1 -lboost_mpi -lboost_serialization -ljpeg /usr/lib/x86_64-linux-gnu/libvtkChartsCore-6.3.so.6.3.0 /usr/lib/x86_64-linux-gnu/libvtkInfovisCore-6.3.so.6.3.0 /usr/lib/x86_64-linux-gnu/libvtkViewsContext2D-6.3.so.6.3.0 /usr/lib/x86_64-linux-gnu/libvtkRenderingContext2D-6.3.so.6.3.0 /usr/lib/x86_64-linux-gnu/libvtkViewsCore-6.3.so.6.3.0 /usr/lib/x86_64-linux-gnu/libvtkInteractionWidgets-6.3.so.6.3.0 /usr/lib/x86_64-linux-gnu/libvtkFiltersHybrid-6.3.so.6.3.0 /usr/lib/x86_64-linux-gnu/libvtkFiltersModeling-6.3.so.6.3.0 /usr/lib/x86_64-linux-gnu/libvtkImagingGeneral-6.3.so.6.3.0 /usr/lib/x86_64-lin ux-gnu/libvtkImagingSources-6.3.so.6.3.0 -lpng -ltiff /usr/lib/x86_64-linux-gnu/libvtkInteractionStyle-6.3.so.6.3.0 /usr/lib/x86_64-linux-gnu/libvtkRenderingAnnotation-6.3.so.6.3.0 /usr/lib/x86_64-linux-gnu/libvtkRenderingFreeType-6.3.so.6.3.0 /usr/lib/x86_64-linux-gnu/libvtkftgl-6.3.so.6.3.0 -lfreetype /usr/lib/x86_64-linux-gnu/libvtkImagingColor-6.3.so.6.3.0 /usr/lib/x86_64-linux-gnu/libvtkRenderingVolume-6.3.so.6.3.0 -lexpat /usr/lib/x86_64-linux-gnu/libvtkRenderingOpenGL-6.3.so.6.3.0 /usr/lib/x86_64-linux-gnu/libvtkRenderingCore-6.3.so.6.3.0 /usr/lib/x86_64-linux-gnu/libvtkCommonColor-6.3.so.6.3.0 /usr/lib/x86_64-linux-gnu/libvtkFiltersExtraction-6.3.so.6.3.0 /usr/lib/x86_64-linux-gnu/libvtkFiltersStatistics-6.3.so.6.3.0 /usr/lib/x86_64-linux-gnu/libvtkImagingFourier-6.3.so.6.3.0 /usr/lib/x86_64-linux-gnu/libvtkalglib-6.3.so.6.3.0 /usr/lib/x86_64-linux-gnu/libvtkFiltersGeometry-6.3.so.6.3.0 /usr/lib/x86_64-linux-gnu/libvtkFiltersSources-6.3.so.6.3.0 /usr/lib/x86_64-linux-gnu/lib vtkFiltersGeneral-6.3.so.6.3.0 /usr/lib/x86_64-linux-gnu/libvtkFiltersCore-6.3.so.6.3.0 /usr/lib/x86_64-linux-gnu/libvtkCommonComputationalGeometry-6.3.so.6.3.0 /usr/lib/x86_64-linux-gnu/libvtkImagingHybrid-6.3.so.6.3.0 /usr/lib/x86_64-linux-gnu/libvtkImagingCore-6.3.so.6.3.0 /usr/lib/x86_64-linux-gnu/libvtkIOImage-6.3.so.6.3.0 /usr/lib/x86_64-linux-gnu/libvtkDICOMParser-6.3.so.6.3.0 /usr/lib/x86_64-linux-gnu/libvtkmetaio-6.3.so.6.3.0 -lz -lGLU -lGL -lSM -lICE -lX11 -lXext -lXt /usr/lib/x86_64-linux-gnu/libvtkIOParallelXML-6.3.so.6.3.0 /usr/lib/x86_64-linux-gnu/libvtkIOXML-6.3.so.6.3.0 /usr/lib/x86_64-linux-gnu/libvtkIOGeometry-6.3.so.6.3.0 /usr/lib/x86_64-linux-gnu/libvtkIOXMLParser-6.3.so.6.3.0 /usr/lib/x86_64-linux-gnu/libvtkParallelCore-6.3.so.6.3.0 /usr/lib/x86_64-linux-gnu/libvtkIOLegacy-6.3.so.6.3.0 /usr/lib/x86_64-linux-gnu/libvtkIOCore-6.3.so.6.3.0 /usr/lib/x86_64-linux-gnu/libvtkCommonExecutionModel-6.3.so.6.3.0 /usr/lib/x86_64-linux-gnu/libvtkCommonDataModel-6.3.so.6.3.0 /usr/lib/x86_64-linux-gnu/libvtkCommonMisc-6.3.so.6.3.0 /usr/lib/x86_64-linux-gnu/libvtkCommonSystem-6.3.so.6.3.0 /usr/lib/x86_64-linux-gnu/libvtksys-6.3.so.6.3.0 -ldl /usr/lib/x86_64-linux-gnu/libvtkCommonTransforms-6.3.so.6.3.0 /usr/lib/x86_64-linux-gnu/libvtkCommonMath-6.3.so.6.3.0 /usr/lib/x86_64-linux-gnu/libvtkCommonCore-6.3.so.6.3.0 make[3]: Leaving directory '/<<BUILDDIR>>/liggghts-3.5.0+repack1/debian/build' [100%] Built target liggghts make[2]: Leaving directory '/<<BUILDDIR>>/liggghts-3.5.0+repack1/debian/build' /usr/bin/cmake -E cmake_progress_start /<<BUILDDIR>>/liggghts-3.5.0+repack1/debian/build/CMakeFiles 0 make[1]: Leaving directory '/<<BUILDDIR>>/liggghts-3.5.0+repack1/debian/build' debian/rules override_dh_auto_test make[1]: Entering directory '/<<BUILDDIR>>/liggghts-3.5.0+repack1' mkdir test cp -r examples/LIGGGHTS/Tutorials_public/heatTransfer_1/* test/ cd test; mpirun -np 2 /<<BUILDDIR>>/liggghts-3.5.0+repack1/debian/build/src/liggghts < in.heatGran -------------------------------------------------------------------------- There are not enough slots available in the system to satisfy the 2 slots that were requested by the application: /<<BUILDDIR>>/liggghts-3.5.0+repack1/debian/build/src/liggghts Either request fewer slots for your application, or make more slots available for use. -------------------------------------------------------------------------- debian/rules:15: recipe for target 'override_dh_auto_test' failed make[1]: *** [override_dh_auto_test] Error 1 make[1]: Leaving directory '/<<BUILDDIR>>/liggghts-3.5.0+repack1' debian/rules:5: recipe for target 'build-indep' failed make: *** [build-indep] Error 2 dpkg-buildpackage: error: debian/rules build-indep gave error exit status 2 -------------------------------------------------------------------------------- I think this is a known problem in many applications using mpi, so I trust that you will know what to do. If you need a full build log, just say so. The bug should be reproducible with sbuild on a single CPU virtual machine. Thanks.
--- End Message ---
--- Begin Message ---Source: liggghts Source-Version: 3.5.0+repack1-9 We believe that the bug you reported is fixed in the latest version of liggghts, which is due to be installed in the Debian FTP archive. A summary of the changes between this version and the previous one is attached. Thank you for reporting the bug, which will now be closed. If you have further comments please address them to 851...@bugs.debian.org, and the maintainer will reopen the bug report if appropriate. Debian distribution maintenance software pp. Anton Gladky <gl...@debian.org> (supplier of updated liggghts package) (This message was generated automatically at their request; if you believe that there is a problem with it please contact the archive administrators by mailing ftpmas...@ftp-master.debian.org) -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 1.8 Date: Wed, 18 Jan 2017 22:46:29 +0100 Source: liggghts Binary: libliggghts-dev libliggghts3 liggghts liggghts-doc Architecture: source Version: 3.5.0+repack1-9 Distribution: unstable Urgency: medium Maintainer: Debian Science Maintainers <debian-science-maintain...@lists.alioth.debian.org> Changed-By: Anton Gladky <gl...@debian.org> Description: libliggghts-dev - Open Source DEM Particle Simulation Software. Development files libliggghts3 - Open Source DEM Particle Simulation Software. Shared library liggghts - Open Source DEM Particle Simulation Software. liggghts-doc - Open Source DEM Particle Simulation Software. Dcoumentation and e Closes: 851726 Changes: liggghts (3.5.0+repack1-9) unstable; urgency=medium . * [a879ac6] Do not fail on mpi-errors. (Closes: #851726) Checksums-Sha1: 18c0a9e76ceb102c09b8d5a2ef5a8bca34c5e6e6 2335 liggghts_3.5.0+repack1-9.dsc 2903efc231578b64a7af85b81da35bc0c5be1e3d 10032 liggghts_3.5.0+repack1-9.debian.tar.xz Checksums-Sha256: 483072f3298c67a76e106a5d69eb6d55f70bc46e0249c4ced46a41bb11b5f032 2335 liggghts_3.5.0+repack1-9.dsc e88aae49bf9bf8ae2c093bcef44772688bc2866eae18e1e74c20d6b6a2f4e29b 10032 liggghts_3.5.0+repack1-9.debian.tar.xz Files: 556e2125a41e8f06bc1f199f22af3a68 2335 science extra liggghts_3.5.0+repack1-9.dsc e664ce5d29c8599eb395d3448cd96676 10032 science extra liggghts_3.5.0+repack1-9.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQIzBAEBCAAdFiEEu71F6oGKuG/2fnKF0+Fzg8+n/wYFAlh/4l4ACgkQ0+Fzg8+n /waPvhAAhBFHD8y7fJfMyfKiRnA5W7cIb3nWsj3qLwkyEn44eNJcpVXKmHaWySqG I39GU7DlsA6xEvbSX+H2xTUfQhsbg/gia7D3jTVI2uRSkfOQCylvim7086fG0dAc sst8Jn0dNTqZ5W8zZvDLlsCikYr8KPS36NV0qUSigNjS3xBroYxJD36W7jPfJ+cs 2YLJfgwOOjPx131tugt1vZ1ZLruXlsz5nLHkH0rPMiW6imoeb8nECEBRTmKPyGds 1uHMEkdo/R/KOOK3yvZVMX075aUw3cACAjMhBDj+pmNuDcDceX00JmCvCMirg7At ENCmiV0nSd3C1Ha2FBQtbznyYRpYIDlorbglx85cjo47dq7tVhooiM2Oz+DLAtKV 41if4RtAsGSLWMrsQ4y9bZJn3oQrDqqLGgGPZxH95TZpmz7JosJA127I+pTD6D9P z3vOsWuIb/g3o9TykI6OBZ9246Im3+pyu1iW+zMiwymDkU1271I/s7yPtfjwPg7P cBjLutYdYbZDGdXio5QqxHrdTxftYQSI6tRerCm43goSg04yth0pT9r2Fzq9W9a9 HR5wLYxEm9VbeBbcXJBG8uBI4e3gGV1NjYQGRLLSmM/6Db2aM/Eg34ojrxwO3kYY q0Cxj75Gd4r34UawobJ9hz+F68uWMQ7Y5w7c8DSf2nCBVhJ0Zd8= =1ORT -----END PGP SIGNATURE-----
--- End Message ---
