QuatSymmetryDetector.java:27: error: package org.jgrapht does not exist)

Debian Bug Tracking System Tue, 20 Dec 2016 02:52:11 -0800

Your message dated Tue, 20 Dec 2016 10:48:38 +0000
with message-id <e1cjhyi-0007rf...@fasolo.debian.org>
and subject line Bug#848768: fixed in biojava4-live 4.2.4+dfsg-2
has caused the Debian Bug report #848768,
regarding biojava4-live: FTBFS:     [javac] 
/<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/biojava-structure/src/main/java/org/biojava/nbio/structure/symmetry/core/QuatSymmetryDetector.java:27:
 error: package org.jgrapht does not exist
to be marked as done.


This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
848768: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=848768
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems

--- Begin Message ---

Source: biojava4-live
Version: 4.2.4+dfsg-1
Severity: serious
Tags: stretch sid
User: debian...@lists.debian.org
Usertags: qa-ftbfs-20161219 qa-ftbfs
Justification: FTBFS on amd64

Hi,

During a rebuild of all packages in sid, your package failed to build on
amd64.

Relevant part (hopefully):
> make[1]: Entering directory '/<<BUILDDIR>>/biojava4-live-4.2.4+dfsg'
> cd biojava-jcolorbrewer && ant jar
> Buildfile: 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/biojava-jcolorbrewer/build.xml
> 
> compile:
>     [mkdir] Created dir: 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/build/biojava4-jcolorbrewer/classes
>     [mkdir] Created dir: /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/dist
>     [javac] 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/biojava-jcolorbrewer/build.xml:76: 
> warning: 'includeantruntime' was not set, defaulting to 
> build.sysclasspath=last; set to false for repeatable builds
>     [javac] Compiling 9 source files to 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/build/biojava4-jcolorbrewer/classes
>     [javac] Note: 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/biojava-jcolorbrewer/src/main/java/org/jcolorbrewer/ui/ColorPaletteChooserDialog.java
>  uses or overrides a deprecated API.
>     [javac] Note: Recompile with -Xlint:deprecation for details.
>      [copy] Warning: 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/biojava-jcolorbrewer/src/main/resources
>  does not exist.
> 
> jar:
>       [jar] Building jar: 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/dist/biojava4-jcolorbrewer.jar
> 
> BUILD SUCCESSFUL
> Total time: 1 second
> cd biojava-forester && ant jar
> Buildfile: /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/biojava-forester/build.xml
> 
> compile:
>     [mkdir] Created dir: 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/build/biojava4-forester/classes
>     [javac] 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/biojava-forester/build.xml:76: 
> warning: 'includeantruntime' was not set, defaulting to 
> build.sysclasspath=last; set to false for repeatable builds
>     [javac] Compiling 359 source files to 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/build/biojava4-forester/classes
>     [javac] Note: 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/biojava-forester/src/main/java/org/forester/archaeopteryx/PdfExporter.java
>  uses or overrides a deprecated API.
>     [javac] Note: Recompile with -Xlint:deprecation for details.
>      [copy] Warning: 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/biojava-forester/src/main/resources 
> does not exist.
> 
> jar:
>       [jar] Building jar: 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/dist/biojava4-forester.jar
> 
> BUILD SUCCESSFUL
> Total time: 4 seconds
> cd biojava-core && ant jar
> Buildfile: /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/biojava-core/build.xml
> 
> compile:
>     [mkdir] Created dir: 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/build/biojava4-core/classes
>     [javac] /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/biojava-core/build.xml:76: 
> warning: 'includeantruntime' was not set, defaulting to 
> build.sysclasspath=last; set to false for repeatable builds
>     [javac] Compiling 176 source files to 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/build/biojava4-core/classes
>     [javac] Note: Some input files use unchecked or unsafe operations.
>     [javac] Note: Recompile with -Xlint:unchecked for details.
>      [copy] Copying 24 files to 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/build/biojava4-core/classes
> 
> jar:
>       [jar] Building jar: 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/dist/biojava4-core.jar
> 
> BUILD SUCCESSFUL
> Total time: 2 seconds
> cd biojava-phylo && ant jar
> Buildfile: /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/biojava-phylo/build.xml
> 
> compile:
>     [mkdir] Created dir: 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/build/biojava4-phylo/classes
>     [javac] 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/biojava-phylo/build.xml:76: warning: 
> 'includeantruntime' was not set, defaulting to build.sysclasspath=last; set 
> to false for repeatable builds
>     [javac] Compiling 8 source files to 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/build/biojava4-phylo/classes
>      [copy] Copying 2 files to 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/build/biojava4-phylo/classes
> 
> jar:
>       [jar] Building jar: 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/dist/biojava4-phylo.jar
> 
> BUILD SUCCESSFUL
> Total time: 0 seconds
> cd biojava-alignment && ant jar
> Buildfile: /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/biojava-alignment/build.xml
> 
> compile:
>     [mkdir] Created dir: 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/build/biojava4-alignment/classes
>     [javac] 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/biojava-alignment/build.xml:76: 
> warning: 'includeantruntime' was not set, defaulting to 
> build.sysclasspath=last; set to false for repeatable builds
>     [javac] Compiling 45 source files to 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/build/biojava4-alignment/classes
>      [copy] Copying 1 file to 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/build/biojava4-alignment/classes
> 
> jar:
>       [jar] Building jar: 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/dist/biojava4-alignment.jar
> 
> BUILD SUCCESSFUL
> Total time: 1 second
> cd biojava-aa-prop && ant jar
> Buildfile: /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/biojava-aa-prop/build.xml
> 
> compile:
>     [mkdir] Created dir: 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/build/biojava4-aa-prop/classes
>     [javac] 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/biojava-aa-prop/build.xml:76: warning: 
> 'includeantruntime' was not set, defaulting to build.sysclasspath=last; set 
> to false for repeatable builds
>     [javac] Compiling 32 source files to 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/build/biojava4-aa-prop/classes
>     [javac] Creating empty 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/build/biojava4-aa-prop/classes/org/biojava/nbio/aaproperties/xml/package-info.class
>     [javac] Creating empty 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/build/biojava4-aa-prop/classes/org/biojava/nbio/aaproperties/profeat/package-info.class
>     [javac] Creating empty 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/build/biojava4-aa-prop/classes/org/biojava/nbio/aaproperties/profeat/convertor/package-info.class
>     [javac] Creating empty 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/build/biojava4-aa-prop/classes/org/biojava/nbio/aaproperties/package-info.class
>      [copy] Copying 11 files to 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/build/biojava4-aa-prop/classes
> 
> jar:
>       [jar] Building jar: 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/dist/biojava4-aa-prop.jar
> 
> BUILD SUCCESSFUL
> Total time: 1 second
> cd biojava-genome && ant jar
> Buildfile: /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/biojava-genome/build.xml
> 
> compile:
>     [mkdir] Created dir: 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/build/biojava4-genome/classes
>     [javac] 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/biojava-genome/build.xml:76: warning: 
> 'includeantruntime' was not set, defaulting to build.sysclasspath=last; set 
> to false for repeatable builds
>     [javac] Compiling 30 source files to 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/build/biojava4-genome/classes
>     [javac] Note: 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/biojava-genome/src/main/java/org/biojava/nbio/genome/util/ChromosomeMappingTools.java
>  uses unchecked or unsafe operations.
>     [javac] Note: Recompile with -Xlint:unchecked for details.
>      [copy] Copying 1 file to 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/build/biojava4-genome/classes
> 
> jar:
>       [jar] Building jar: 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/dist/biojava4-genome.jar
> 
> BUILD SUCCESSFUL
> Total time: 1 second
> cd biojava-sequencing && ant jar
> Buildfile: /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/biojava-sequencing/build.xml
> 
> compile:
>     [mkdir] Created dir: 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/build/biojava4-sequencing/classes
>     [javac] 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/biojava-sequencing/build.xml:76: 
> warning: 'includeantruntime' was not set, defaulting to 
> build.sysclasspath=last; set to false for repeatable builds
>     [javac] Compiling 19 source files to 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/build/biojava4-sequencing/classes
>     [javac] Creating empty 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/build/biojava4-sequencing/classes/org/biojava/nbio/sequencing/io/fastq/package-info.class
>      [copy] Warning: 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/biojava-sequencing/src/main/resources 
> does not exist.
> 
> jar:
>       [jar] Building jar: 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/dist/biojava4-sequencing.jar
> 
> BUILD SUCCESSFUL
> Total time: 0 seconds
> cd biojava-structure && ant jar
> Buildfile: /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/biojava-structure/build.xml
> 
> compile:
>     [mkdir] Created dir: 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/build/biojava4-structure/classes
>     [javac] 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/biojava-structure/build.xml:76: 
> warning: 'includeantruntime' was not set, defaulting to 
> build.sysclasspath=last; set to false for repeatable builds
>     [javac] Compiling 482 source files to 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/build/biojava4-structure/classes
>     [javac] 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/biojava-structure/src/main/java/org/biojava/nbio/structure/symmetry/core/QuatSymmetryDetector.java:27:
>  error: package org.jgrapht does not exist
>     [javac] import org.jgrapht.UndirectedGraph;
>     [javac]                   ^
>     [javac] 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/biojava-structure/src/main/java/org/biojava/nbio/structure/symmetry/core/QuatSymmetryDetector.java:28:
>  error: package org.jgrapht.alg does not exist
>     [javac] import org.jgrapht.alg.ConnectivityInspector;
>     [javac]                       ^
>     [javac] 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/biojava-structure/src/main/java/org/biojava/nbio/structure/symmetry/core/QuatSymmetryDetector.java:29:
>  error: package org.jgrapht.graph does not exist
>     [javac] import org.jgrapht.graph.DefaultEdge;
>     [javac]                         ^
>     [javac] 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/biojava-structure/src/main/java/org/biojava/nbio/structure/symmetry/core/QuatSymmetryDetector.java:30:
>  error: package org.jgrapht.graph does not exist
>     [javac] import org.jgrapht.graph.UndirectedSubgraph;
>     [javac]                         ^
>     [javac] 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/biojava-structure/src/main/java/org/biojava/nbio/structure/symmetry/core/QuatSymmetryDetector.java:467:
>  error: cannot find symbol
>     [javac]   private static boolean 
> isConnectedGraph(UndirectedGraph<Integer, DefaultEdge> graph) {
>     [javac]                                           ^
>     [javac]   symbol:   class UndirectedGraph
>     [javac]   location: class QuatSymmetryDetector
>     [javac] 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/biojava-structure/src/main/java/org/biojava/nbio/structure/symmetry/core/QuatSymmetryDetector.java:467:
>  error: cannot find symbol
>     [javac]   private static boolean 
> isConnectedGraph(UndirectedGraph<Integer, DefaultEdge> graph) {
>     [javac]                                                                   
>  ^
>     [javac]   symbol:   class DefaultEdge
>     [javac]   location: class QuatSymmetryDetector
>     [javac] 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/biojava-structure/src/main/java/org/biojava/nbio/structure/symmetry/core/SubunitGraph.java:25:
>  error: package org.jgrapht does not exist
>     [javac] import org.jgrapht.UndirectedGraph;
>     [javac]                   ^
>     [javac] 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/biojava-structure/src/main/java/org/biojava/nbio/structure/symmetry/core/SubunitGraph.java:26:
>  error: package org.jgrapht.graph does not exist
>     [javac] import org.jgrapht.graph.DefaultEdge;
>     [javac]                         ^
>     [javac] 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/biojava-structure/src/main/java/org/biojava/nbio/structure/symmetry/core/SubunitGraph.java:27:
>  error: package org.jgrapht.graph does not exist
>     [javac] import org.jgrapht.graph.SimpleGraph;
>     [javac]                         ^
>     [javac] 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/biojava-structure/src/main/java/org/biojava/nbio/structure/symmetry/core/SubunitGraph.java:46:
>  error: cannot find symbol
>     [javac]   public UndirectedGraph<Integer, DefaultEdge> getProteinGraph() {
>     [javac]          ^
>     [javac]   symbol:   class UndirectedGraph
>     [javac]   location: class SubunitGraph
>     [javac] 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/biojava-structure/src/main/java/org/biojava/nbio/structure/symmetry/core/SubunitGraph.java:46:
>  error: cannot find symbol
>     [javac]   public UndirectedGraph<Integer, DefaultEdge> getProteinGraph() {
>     [javac]                                   ^
>     [javac]   symbol:   class DefaultEdge
>     [javac]   location: class SubunitGraph
>     [javac] 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/biojava-structure/src/main/java/org/biojava/nbio/structure/symmetry/internal/CeSymmIterative.java:48:
>  error: package org.jgrapht does not exist
>     [javac] import org.jgrapht.UndirectedGraph;
>     [javac]                   ^
>     [javac] 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/biojava-structure/src/main/java/org/biojava/nbio/structure/symmetry/internal/CeSymmIterative.java:49:
>  error: package org.jgrapht.alg does not exist
>     [javac] import org.jgrapht.alg.ConnectivityInspector;
>     [javac]                       ^
>     [javac] 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/biojava-structure/src/main/java/org/biojava/nbio/structure/symmetry/internal/CeSymmIterative.java:50:
>  error: package org.jgrapht.graph does not exist
>     [javac] import org.jgrapht.graph.DefaultEdge;
>     [javac]                         ^
>     [javac] 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/biojava-structure/src/main/java/org/biojava/nbio/structure/symmetry/internal/CeSymmIterative.java:51:
>  error: package org.jgrapht.graph does not exist
>     [javac] import org.jgrapht.graph.SimpleGraph;
>     [javac]                         ^
>     [javac] 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/biojava-structure/src/main/java/org/biojava/nbio/structure/symmetry/internal/CeSymmIterative.java:79:
>  error: cannot find symbol
>     [javac]   private UndirectedGraph<Integer, DefaultEdge> alignGraph; // 
> cumulative
>     [javac]           ^
>     [javac]   symbol:   class UndirectedGraph
>     [javac]   location: class CeSymmIterative
>     [javac] 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/biojava-structure/src/main/java/org/biojava/nbio/structure/symmetry/internal/CeSymmIterative.java:79:
>  error: cannot find symbol
>     [javac]   private UndirectedGraph<Integer, DefaultEdge> alignGraph; // 
> cumulative
>     [javac]                                    ^
>     [javac]   symbol:   class DefaultEdge
>     [javac]   location: class CeSymmIterative
>     [javac] 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/biojava-structure/src/main/java/org/biojava/nbio/structure/symmetry/internal/GraphComponentOrderDetector.java:31:
>  error: package org.jgrapht does not exist
>     [javac] import org.jgrapht.UndirectedGraph;
>     [javac]                   ^
>     [javac] 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/biojava-structure/src/main/java/org/biojava/nbio/structure/symmetry/internal/GraphComponentOrderDetector.java:32:
>  error: package org.jgrapht.alg does not exist
>     [javac] import org.jgrapht.alg.ConnectivityInspector;
>     [javac]                       ^
>     [javac] 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/biojava-structure/src/main/java/org/biojava/nbio/structure/symmetry/internal/GraphComponentOrderDetector.java:33:
>  error: package org.jgrapht.graph does not exist
>     [javac] import org.jgrapht.graph.DefaultEdge;
>     [javac]                         ^
>     [javac] 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/biojava-structure/src/main/java/org/biojava/nbio/structure/symmetry/internal/GraphComponentRefiner.java:37:
>  error: package org.jgrapht does not exist
>     [javac] import org.jgrapht.UndirectedGraph;
>     [javac]                   ^
>     [javac] 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/biojava-structure/src/main/java/org/biojava/nbio/structure/symmetry/internal/GraphComponentRefiner.java:38:
>  error: package org.jgrapht.alg does not exist
>     [javac] import org.jgrapht.alg.ConnectivityInspector;
>     [javac]                       ^
>     [javac] 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/biojava-structure/src/main/java/org/biojava/nbio/structure/symmetry/internal/GraphComponentRefiner.java:39:
>  error: package org.jgrapht.graph does not exist
>     [javac] import org.jgrapht.graph.DefaultEdge;
>     [javac]                         ^
>     [javac] 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/biojava-structure/src/main/java/org/biojava/nbio/structure/symmetry/utils/SymmetryTools.java:65:
>  error: package org.jgrapht does not exist
>     [javac] import org.jgrapht.UndirectedGraph;
>     [javac]                   ^
>     [javac] 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/biojava-structure/src/main/java/org/biojava/nbio/structure/symmetry/utils/SymmetryTools.java:66:
>  error: package org.jgrapht.graph does not exist
>     [javac] import org.jgrapht.graph.DefaultEdge;
>     [javac]                         ^
>     [javac] 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/biojava-structure/src/main/java/org/biojava/nbio/structure/symmetry/utils/SymmetryTools.java:67:
>  error: package org.jgrapht.graph does not exist
>     [javac] import org.jgrapht.graph.SimpleGraph;
>     [javac]                         ^
>     [javac] 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/biojava-structure/src/main/java/org/biojava/nbio/structure/symmetry/utils/SymmetryTools.java:477:
>  error: cannot find symbol
>     [javac]   public static UndirectedGraph<Integer, DefaultEdge> 
> buildSymmetryGraph(
>     [javac]                 ^
>     [javac]   symbol:   class UndirectedGraph
>     [javac]   location: class SymmetryTools
>     [javac] 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/biojava-structure/src/main/java/org/biojava/nbio/structure/symmetry/utils/SymmetryTools.java:477:
>  error: cannot find symbol
>     [javac]   public static UndirectedGraph<Integer, DefaultEdge> 
> buildSymmetryGraph(
>     [javac]                                          ^
>     [javac]   symbol:   class DefaultEdge
>     [javac]   location: class SymmetryTools
>     [javac] 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/biojava-structure/src/main/java/org/biojava/nbio/structure/symmetry/core/QuatSymmetryDetector.java:399:
>  error: cannot find symbol
>     [javac]           UndirectedGraph<Integer, DefaultEdge> graph = 
> subunitGraph.getProteinGraph();
>     [javac]           ^
>     [javac]   symbol:   class UndirectedGraph
>     [javac]   location: class QuatSymmetryDetector
>     [javac] 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/biojava-structure/src/main/java/org/biojava/nbio/structure/symmetry/core/QuatSymmetryDetector.java:399:
>  error: cannot find symbol
>     [javac]           UndirectedGraph<Integer, DefaultEdge> graph = 
> subunitGraph.getProteinGraph();
>     [javac]                                    ^
>     [javac]   symbol:   class DefaultEdge
>     [javac]   location: class QuatSymmetryDetector
>     [javac] 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/biojava-structure/src/main/java/org/biojava/nbio/structure/symmetry/core/QuatSymmetryDetector.java:437:
>  error: cannot find symbol
>     [javac]                           UndirectedGraph<Integer, DefaultEdge> 
> subGraph = new UndirectedSubgraph<Integer, DefaultEdge>(graph, new 
> HashSet<Integer>(subSet), null);
>     [javac]                           ^
>     [javac]   symbol:   class UndirectedGraph
>     [javac]   location: class QuatSymmetryDetector
>     [javac] 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/biojava-structure/src/main/java/org/biojava/nbio/structure/symmetry/core/QuatSymmetryDetector.java:437:
>  error: cannot find symbol
>     [javac]                           UndirectedGraph<Integer, DefaultEdge> 
> subGraph = new UndirectedSubgraph<Integer, DefaultEdge>(graph, new 
> HashSet<Integer>(subSet), null);
>     [javac]                                                    ^
>     [javac]   symbol:   class DefaultEdge
>     [javac]   location: class QuatSymmetryDetector
>     [javac] 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/biojava-structure/src/main/java/org/biojava/nbio/structure/symmetry/core/QuatSymmetryDetector.java:437:
>  error: cannot find symbol
>     [javac]                           UndirectedGraph<Integer, DefaultEdge> 
> subGraph = new UndirectedSubgraph<Integer, DefaultEdge>(graph, new 
> HashSet<Integer>(subSet), null);
>     [javac]                                                                   
>              ^
>     [javac]   symbol:   class UndirectedSubgraph
>     [javac]   location: class QuatSymmetryDetector
>     [javac] 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/biojava-structure/src/main/java/org/biojava/nbio/structure/symmetry/core/QuatSymmetryDetector.java:437:
>  error: cannot find symbol
>     [javac]                           UndirectedGraph<Integer, DefaultEdge> 
> subGraph = new UndirectedSubgraph<Integer, DefaultEdge>(graph, new 
> HashSet<Integer>(subSet), null);
>     [javac]                                                                   
>                                          ^
>     [javac]   symbol:   class DefaultEdge
>     [javac]   location: class QuatSymmetryDetector
>     [javac] 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/biojava-structure/src/main/java/org/biojava/nbio/structure/symmetry/core/QuatSymmetryDetector.java:468:
>  error: cannot find symbol
>     [javac]           ConnectivityInspector<Integer, DefaultEdge> inspector = 
> new ConnectivityInspector<Integer, DefaultEdge>(graph);
>     [javac]           ^
>     [javac]   symbol:   class ConnectivityInspector
>     [javac]   location: class QuatSymmetryDetector
>     [javac] 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/biojava-structure/src/main/java/org/biojava/nbio/structure/symmetry/core/QuatSymmetryDetector.java:468:
>  error: cannot find symbol
>     [javac]           ConnectivityInspector<Integer, DefaultEdge> inspector = 
> new ConnectivityInspector<Integer, DefaultEdge>(graph);
>     [javac]                                          ^
>     [javac]   symbol:   class DefaultEdge
>     [javac]   location: class QuatSymmetryDetector
>     [javac] 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/biojava-structure/src/main/java/org/biojava/nbio/structure/symmetry/core/QuatSymmetryDetector.java:468:
>  error: cannot find symbol
>     [javac]           ConnectivityInspector<Integer, DefaultEdge> inspector = 
> new ConnectivityInspector<Integer, DefaultEdge>(graph);
>     [javac]                                                                   
>     ^
>     [javac]   symbol:   class ConnectivityInspector
>     [javac]   location: class QuatSymmetryDetector
>     [javac] 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/biojava-structure/src/main/java/org/biojava/nbio/structure/symmetry/core/QuatSymmetryDetector.java:468:
>  error: cannot find symbol
>     [javac]           ConnectivityInspector<Integer, DefaultEdge> inspector = 
> new ConnectivityInspector<Integer, DefaultEdge>(graph);
>     [javac]                                                                   
>                                    ^
>     [javac]   symbol:   class DefaultEdge
>     [javac]   location: class QuatSymmetryDetector
>     [javac] 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/biojava-structure/src/main/java/org/biojava/nbio/structure/symmetry/core/SubunitGraph.java:50:
>  error: cannot find symbol
>     [javac]           UndirectedGraph<Integer, DefaultEdge> graph = new 
> SimpleGraph<Integer, DefaultEdge>(DefaultEdge.class);
>     [javac]           ^
>     [javac]   symbol:   class UndirectedGraph
>     [javac]   location: class SubunitGraph
>     [javac] 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/biojava-structure/src/main/java/org/biojava/nbio/structure/symmetry/core/SubunitGraph.java:50:
>  error: cannot find symbol
>     [javac]           UndirectedGraph<Integer, DefaultEdge> graph = new 
> SimpleGraph<Integer, DefaultEdge>(DefaultEdge.class);
>     [javac]                                    ^
>     [javac]   symbol:   class DefaultEdge
>     [javac]   location: class SubunitGraph
>     [javac] 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/biojava-structure/src/main/java/org/biojava/nbio/structure/symmetry/core/SubunitGraph.java:50:
>  error: cannot find symbol
>     [javac]           UndirectedGraph<Integer, DefaultEdge> graph = new 
> SimpleGraph<Integer, DefaultEdge>(DefaultEdge.class);
>     [javac]                                                             ^
>     [javac]   symbol:   class SimpleGraph
>     [javac]   location: class SubunitGraph
>     [javac] 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/biojava-structure/src/main/java/org/biojava/nbio/structure/symmetry/core/SubunitGraph.java:50:
>  error: cannot find symbol
>     [javac]           UndirectedGraph<Integer, DefaultEdge> graph = new 
> SimpleGraph<Integer, DefaultEdge>(DefaultEdge.class);
>     [javac]                                                                   
>                ^
>     [javac]   symbol:   class DefaultEdge
>     [javac]   location: class SubunitGraph
>     [javac] 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/biojava-structure/src/main/java/org/biojava/nbio/structure/symmetry/core/SubunitGraph.java:50:
>  error: cannot find symbol
>     [javac]           UndirectedGraph<Integer, DefaultEdge> graph = new 
> SimpleGraph<Integer, DefaultEdge>(DefaultEdge.class);
>     [javac]                                                                   
>                             ^
>     [javac]   symbol:   class DefaultEdge
>     [javac]   location: class SubunitGraph
>     [javac] 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/biojava-structure/src/main/java/org/biojava/nbio/structure/symmetry/internal/CeSymmIterative.java:92:
>  error: cannot find symbol
>     [javac]           alignGraph = new SimpleGraph<Integer, 
> DefaultEdge>(DefaultEdge.class);
>     [javac]                            ^
>     [javac]   symbol:   class SimpleGraph
>     [javac]   location: class CeSymmIterative
>     [javac] 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/biojava-structure/src/main/java/org/biojava/nbio/structure/symmetry/internal/CeSymmIterative.java:92:
>  error: cannot find symbol
>     [javac]           alignGraph = new SimpleGraph<Integer, 
> DefaultEdge>(DefaultEdge.class);
>     [javac]                                                 ^
>     [javac]   symbol:   class DefaultEdge
>     [javac]   location: class CeSymmIterative
>     [javac] 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/biojava-structure/src/main/java/org/biojava/nbio/structure/symmetry/internal/CeSymmIterative.java:92:
>  error: cannot find symbol
>     [javac]           alignGraph = new SimpleGraph<Integer, 
> DefaultEdge>(DefaultEdge.class);
>     [javac]                                                              ^
>     [javac]   symbol:   class DefaultEdge
>     [javac]   location: class CeSymmIterative
>     [javac] 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/biojava-structure/src/main/java/org/biojava/nbio/structure/symmetry/internal/CeSymmIterative.java:233:
>  error: cannot find symbol
>     [javac]           ConnectivityInspector<Integer, DefaultEdge> inspector = 
> new ConnectivityInspector<Integer, DefaultEdge>(
>     [javac]           ^
>     [javac]   symbol:   class ConnectivityInspector
>     [javac]   location: class CeSymmIterative
>     [javac] 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/biojava-structure/src/main/java/org/biojava/nbio/structure/symmetry/internal/CeSymmIterative.java:233:
>  error: cannot find symbol
>     [javac]           ConnectivityInspector<Integer, DefaultEdge> inspector = 
> new ConnectivityInspector<Integer, DefaultEdge>(
>     [javac]                                          ^
>     [javac]   symbol:   class DefaultEdge
>     [javac]   location: class CeSymmIterative
>     [javac] 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/biojava-structure/src/main/java/org/biojava/nbio/structure/symmetry/internal/CeSymmIterative.java:233:
>  error: cannot find symbol
>     [javac]           ConnectivityInspector<Integer, DefaultEdge> inspector = 
> new ConnectivityInspector<Integer, DefaultEdge>(
>     [javac]                                                                   
>     ^
>     [javac]   symbol:   class ConnectivityInspector
>     [javac]   location: class CeSymmIterative
>     [javac] 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/biojava-structure/src/main/java/org/biojava/nbio/structure/symmetry/internal/CeSymmIterative.java:233:
>  error: cannot find symbol
>     [javac]           ConnectivityInspector<Integer, DefaultEdge> inspector = 
> new ConnectivityInspector<Integer, DefaultEdge>(
>     [javac]                                                                   
>                                    ^
>     [javac]   symbol:   class DefaultEdge
>     [javac]   location: class CeSymmIterative
>     [javac] 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/biojava-structure/src/main/java/org/biojava/nbio/structure/symmetry/internal/GraphComponentOrderDetector.java:53:
>  error: cannot find symbol
>     [javac]           UndirectedGraph<Integer, DefaultEdge> graph = 
> SymmetryTools
>     [javac]           ^
>     [javac]   symbol:   class UndirectedGraph
>     [javac]   location: class GraphComponentOrderDetector
>     [javac] 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/biojava-structure/src/main/java/org/biojava/nbio/structure/symmetry/internal/GraphComponentOrderDetector.java:53:
>  error: cannot find symbol
>     [javac]           UndirectedGraph<Integer, DefaultEdge> graph = 
> SymmetryTools
>     [javac]                                    ^
>     [javac]   symbol:   class DefaultEdge
>     [javac]   location: class GraphComponentOrderDetector
>     [javac] 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/biojava-structure/src/main/java/org/biojava/nbio/structure/symmetry/internal/GraphComponentOrderDetector.java:57:
>  error: cannot find symbol
>     [javac]           ConnectivityInspector<Integer, DefaultEdge> inspector =
>     [javac]           ^
>     [javac]   symbol:   class ConnectivityInspector
>     [javac]   location: class GraphComponentOrderDetector
>     [javac] 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/biojava-structure/src/main/java/org/biojava/nbio/structure/symmetry/internal/GraphComponentOrderDetector.java:57:
>  error: cannot find symbol
>     [javac]           ConnectivityInspector<Integer, DefaultEdge> inspector =
>     [javac]                                          ^
>     [javac]   symbol:   class DefaultEdge
>     [javac]   location: class GraphComponentOrderDetector
>     [javac] 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/biojava-structure/src/main/java/org/biojava/nbio/structure/symmetry/internal/GraphComponentOrderDetector.java:58:
>  error: cannot find symbol
>     [javac]                           new ConnectivityInspector<Integer, 
> DefaultEdge>(graph);
>     [javac]                               ^
>     [javac]   symbol:   class ConnectivityInspector
>     [javac]   location: class GraphComponentOrderDetector
>     [javac] 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/biojava-structure/src/main/java/org/biojava/nbio/structure/symmetry/internal/GraphComponentOrderDetector.java:58:
>  error: cannot find symbol
>     [javac]                           new ConnectivityInspector<Integer, 
> DefaultEdge>(graph);
>     [javac]                                                              ^
>     [javac]   symbol:   class DefaultEdge
>     [javac]   location: class GraphComponentOrderDetector
>     [javac] 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/biojava-structure/src/main/java/org/biojava/nbio/structure/symmetry/internal/GraphComponentRefiner.java:62:
>  error: cannot find symbol
>     [javac]           UndirectedGraph<Integer, DefaultEdge> graph = 
> SymmetryTools
>     [javac]           ^
>     [javac]   symbol:   class UndirectedGraph
>     [javac]   location: class GraphComponentRefiner
>     [javac] 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/biojava-structure/src/main/java/org/biojava/nbio/structure/symmetry/internal/GraphComponentRefiner.java:62:
>  error: cannot find symbol
>     [javac]           UndirectedGraph<Integer, DefaultEdge> graph = 
> SymmetryTools
>     [javac]                                    ^
>     [javac]   symbol:   class DefaultEdge
>     [javac]   location: class GraphComponentRefiner
>     [javac] 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/biojava-structure/src/main/java/org/biojava/nbio/structure/symmetry/internal/GraphComponentRefiner.java:66:
>  error: cannot find symbol
>     [javac]           ConnectivityInspector<Integer, DefaultEdge> inspector = 
> new ConnectivityInspector<Integer, DefaultEdge>(
>     [javac]           ^
>     [javac]   symbol:   class ConnectivityInspector
>     [javac]   location: class GraphComponentRefiner
>     [javac] 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/biojava-structure/src/main/java/org/biojava/nbio/structure/symmetry/internal/GraphComponentRefiner.java:66:
>  error: cannot find symbol
>     [javac]           ConnectivityInspector<Integer, DefaultEdge> inspector = 
> new ConnectivityInspector<Integer, DefaultEdge>(
>     [javac]                                          ^
>     [javac]   symbol:   class DefaultEdge
>     [javac]   location: class GraphComponentRefiner
>     [javac] 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/biojava-structure/src/main/java/org/biojava/nbio/structure/symmetry/internal/GraphComponentRefiner.java:66:
>  error: cannot find symbol
>     [javac]           ConnectivityInspector<Integer, DefaultEdge> inspector = 
> new ConnectivityInspector<Integer, DefaultEdge>(
>     [javac]                                                                   
>     ^
>     [javac]   symbol:   class ConnectivityInspector
>     [javac]   location: class GraphComponentRefiner
>     [javac] 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/biojava-structure/src/main/java/org/biojava/nbio/structure/symmetry/internal/GraphComponentRefiner.java:66:
>  error: cannot find symbol
>     [javac]           ConnectivityInspector<Integer, DefaultEdge> inspector = 
> new ConnectivityInspector<Integer, DefaultEdge>(
>     [javac]                                                                   
>                                    ^
>     [javac]   symbol:   class DefaultEdge
>     [javac]   location: class GraphComponentRefiner
>     [javac] 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/biojava-structure/src/main/java/org/biojava/nbio/structure/symmetry/utils/SymmetryTools.java:480:
>  error: cannot find symbol
>     [javac]           UndirectedGraph<Integer, DefaultEdge> graph = new 
> SimpleGraph<Integer, DefaultEdge>(
>     [javac]           ^
>     [javac]   symbol:   class UndirectedGraph
>     [javac]   location: class SymmetryTools
>     [javac] 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/biojava-structure/src/main/java/org/biojava/nbio/structure/symmetry/utils/SymmetryTools.java:480:
>  error: cannot find symbol
>     [javac]           UndirectedGraph<Integer, DefaultEdge> graph = new 
> SimpleGraph<Integer, DefaultEdge>(
>     [javac]                                    ^
>     [javac]   symbol:   class DefaultEdge
>     [javac]   location: class SymmetryTools
>     [javac] 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/biojava-structure/src/main/java/org/biojava/nbio/structure/symmetry/utils/SymmetryTools.java:480:
>  error: cannot find symbol
>     [javac]           UndirectedGraph<Integer, DefaultEdge> graph = new 
> SimpleGraph<Integer, DefaultEdge>(
>     [javac]                                                             ^
>     [javac]   symbol:   class SimpleGraph
>     [javac]   location: class SymmetryTools
>     [javac] 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/biojava-structure/src/main/java/org/biojava/nbio/structure/symmetry/utils/SymmetryTools.java:480:
>  error: cannot find symbol
>     [javac]           UndirectedGraph<Integer, DefaultEdge> graph = new 
> SimpleGraph<Integer, DefaultEdge>(
>     [javac]                                                                   
>                ^
>     [javac]   symbol:   class DefaultEdge
>     [javac]   location: class SymmetryTools
>     [javac] 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/biojava-structure/src/main/java/org/biojava/nbio/structure/symmetry/utils/SymmetryTools.java:481:
>  error: cannot find symbol
>     [javac]                           DefaultEdge.class);
>     [javac]                           ^
>     [javac]   symbol:   class DefaultEdge
>     [javac]   location: class SymmetryTools
>     [javac] Note: Some input files use or override a deprecated API.
>     [javac] Note: Recompile with -Xlint:deprecation for details.
>     [javac] Note: 
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/biojava-structure/src/main/java/org/biojava/nbio/structure/io/mmcif/MetalBondConsumer.java
>  uses unchecked or unsafe operations.
>     [javac] Note: Recompile with -Xlint:unchecked for details.
>     [javac] 67 errors
> 
> BUILD FAILED
> /<<BUILDDIR>>/biojava4-live-4.2.4+dfsg/biojava-structure/build.xml:76: 
> Compile failed; see the compiler error output for details.
> 
> Total time: 3 seconds
> debian/rules:34: recipe for target 'override_dh_auto_build' failed
> make[1]: *** [override_dh_auto_build] Error 1

The full build log is available from:
   http://aws-logs.debian.net/2016/12/19/biojava4-live_4.2.4+dfsg-1_unstable.log

A list of current common problems and possible solutions is available at
http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute!

About the archive rebuild: The rebuild was done on EC2 VM instances from
Amazon Web Services, using a clean, minimal and up-to-date chroot. Every
failed build was retried once to eliminate random failures.

--- End Message ---

--- Begin Message ---

Source: biojava4-live
Source-Version: 4.2.4+dfsg-2

We believe that the bug you reported is fixed in the latest version of
biojava4-live, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 848...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Olivier Sallou <osal...@debian.org> (supplier of updated biojava4-live package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)


-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256

Format: 1.8
Date: Tue, 20 Dec 2016 10:48:01 +0100
Source: biojava4-live
Binary: libbiojava4.0-java libbiojava4-java libbiojava4-java-doc
Architecture: source all
Version: 4.2.4+dfsg-2
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team 
<debian-med-packag...@lists.alioth.debian.org>
Changed-By: Olivier Sallou <osal...@debian.org>
Description:
 libbiojava4-java - Java API to biological data and applications (default 
version)
 libbiojava4-java-doc - [Biology] Documentation for BioJava
 libbiojava4.0-java - Java API to biological data and applications (version 4)
Closes: 848768
Changes:
 biojava4-live (4.2.4+dfsg-2) unstable; urgency=medium
 .
   * d/control: add jgrapht as required dependency instead of suggests
                (Closes: #848768)
Checksums-Sha1:
 79baf7d83bcf4044f7d87943548d1e68207e4006 2636 biojava4-live_4.2.4+dfsg-2.dsc
 bf104d0f4bc2ab101a57988da4ca8654730777f8 14144 
biojava4-live_4.2.4+dfsg-2.debian.tar.xz
 164b682cebfd14d92fdc942873971e7f550d76a7 10865 
biojava4-live_4.2.4+dfsg-2_amd64.buildinfo
 e326455a5d0614abdc7affbb6a7d5fa0a55b2735 1660636 
libbiojava4-java-doc_4.2.4+dfsg-2_all.deb
 c94801a5be157272e3a12aa8b26b814a318ef263 3622 
libbiojava4-java_4.2.4+dfsg-2_all.deb
 2565ae693bccd2224c771b36f35fe77e8f31ee9e 5456530 
libbiojava4.0-java_4.2.4+dfsg-2_all.deb
Checksums-Sha256:
 1bfec2eae206d6733cd84d88cf088bd9fd44c014ada03b587baa69ef9a3a994d 2636 
biojava4-live_4.2.4+dfsg-2.dsc
 543da4ca1dbe6d2f44476070001827414cbd0435e0782d2ad03e146ba2ba9261 14144 
biojava4-live_4.2.4+dfsg-2.debian.tar.xz
 e475184c34f31dcf8effc6566c2903bcca339cb8a29456947837a24df5dd7579 10865 
biojava4-live_4.2.4+dfsg-2_amd64.buildinfo
 70ecae1c62b855d1acaea7f979027a220d8974c5a0597505782c2e0bfae1c6b5 1660636 
libbiojava4-java-doc_4.2.4+dfsg-2_all.deb
 e9416a41fef371296a76fc72e5e309ee5312d6bbaf07c9205bb4a44ff4293673 3622 
libbiojava4-java_4.2.4+dfsg-2_all.deb
 bee650b4c2142fa106db3d966b773127ae777277a23ef36516b535eacd37dffe 5456530 
libbiojava4.0-java_4.2.4+dfsg-2_all.deb
Files:
 93fa72fb56577132f0b6ab2df6010e92 2636 java optional 
biojava4-live_4.2.4+dfsg-2.dsc
 584b44ff5bedb64be8c4a0eab705e9c5 14144 java optional 
biojava4-live_4.2.4+dfsg-2.debian.tar.xz
 c9993f5a14df2a68aaecbe59519a902c 10865 java optional 
biojava4-live_4.2.4+dfsg-2_amd64.buildinfo
 4352658b11bd910bba7ebf74ce474d08 1660636 doc optional 
libbiojava4-java-doc_4.2.4+dfsg-2_all.deb
 ef78fa98846f4edc581d1ec9412da027 3622 java optional 
libbiojava4-java_4.2.4+dfsg-2_all.deb
 9c637e7f94c4342bbb1f6887c0de69eb 5456530 java optional 
libbiojava4.0-java_4.2.4+dfsg-2_all.deb

-----BEGIN PGP SIGNATURE-----
Version: GnuPG v2
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=DICz
-----END PGP SIGNATURE-----

--- End Message ---

Bug#848768: marked as done (biojava4-live: FTBFS: [javac] /<>/biojava4-live-4.2.4+dfsg/biojava-structure/src/main/java/org/biojava/nbio/structure/symmetry/core/QuatSymmetryDetector.java:27: error: package org.jgrapht does not exist)

Reply via email to