Your message dated Tue, 20 Dec 2016 00:04:36 +0000
with message-id <e1cj7v2-000bhl...@fasolo.debian.org>
and subject line Bug#848779: fixed in pyfits 1:3.4-4
has caused the Debian Bug report #848779,
regarding pyfits: FTBFS: dh_auto_test: pybuild --test --test-nose -i
python{version} -p 2.7 returned exit code 13
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)
--
848779: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=848779
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: pyfits
Version: 1:3.4-3
Severity: serious
Tags: stretch sid
User: debian...@lists.debian.org
Usertags: qa-ftbfs-20161219 qa-ftbfs
Justification: FTBFS on amd64
Hi,
During a rebuild of all packages in sid, your package failed to build on
amd64.
Relevant part (hopefully):
> debian/rules build
> dh build --with python2,python3 --buildsystem=pybuild --parallel
> dh_testdir -O--buildsystem=pybuild -O--parallel
> dh_update_autotools_config -O--buildsystem=pybuild -O--parallel
> dh_auto_configure -O--buildsystem=pybuild -O--parallel
> I: pybuild base:184: python2.7 setup.py config
> running config
> I: pybuild base:184: python3.5 setup.py config
> running config
> dh_auto_build -O--buildsystem=pybuild -O--parallel
> I: pybuild base:184: /usr/bin/python setup.py build
> running build
> running build_py
> creating /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/pyfits
> copying pyfits/file.py -> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/pyfits
> copying pyfits/card.py -> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/pyfits
> copying pyfits/verify.py ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/pyfits
> copying pyfits/_numpy_hacks.py ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/pyfits
> copying pyfits/py3compat.py ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/pyfits
> copying pyfits/header.py ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/pyfits
> copying pyfits/core.py -> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/pyfits
> copying pyfits/_release.py ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/pyfits
> copying pyfits/__init__.py ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/pyfits
> copying pyfits/column.py ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/pyfits
> copying pyfits/util.py -> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/pyfits
> copying pyfits/convenience.py ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/pyfits
> copying pyfits/version.py ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/pyfits
> copying pyfits/diff.py -> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/pyfits
> copying pyfits/fitsrec.py ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/pyfits
> creating /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/pyfits/_compat
> copying pyfits/_compat/__init__.py ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/pyfits/_compat
> copying pyfits/_compat/weakref.py ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/pyfits/_compat
> copying pyfits/_compat/odict.py ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/pyfits/_compat
> creating
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/pyfits/_compat/_odict_py2
> copying pyfits/_compat/_odict_py2/__init__.py ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/pyfits/_compat/_odict_py2
> creating
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/pyfits/_compat/_weakset_py2
> copying pyfits/_compat/_weakset_py2/__init__.py ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/pyfits/_compat/_weakset_py2
> creating /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/pyfits/extern
> copying pyfits/extern/six.py ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/pyfits/extern
> copying pyfits/extern/__init__.py ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/pyfits/extern
> creating /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/pyfits/hdu
> copying pyfits/hdu/table.py ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/pyfits/hdu
> copying pyfits/hdu/image.py ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/pyfits/hdu
> copying pyfits/hdu/__init__.py ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/pyfits/hdu
> copying pyfits/hdu/compressed.py ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/pyfits/hdu
> copying pyfits/hdu/hdulist.py ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/pyfits/hdu
> copying pyfits/hdu/streaming.py ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/pyfits/hdu
> copying pyfits/hdu/base.py ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/pyfits/hdu
> copying pyfits/hdu/groups.py ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/pyfits/hdu
> copying pyfits/hdu/nonstandard.py ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/pyfits/hdu
> creating /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/pyfits/scripts
> copying pyfits/scripts/fitscheck.py ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/pyfits/scripts
> copying pyfits/scripts/fitsinfo.py ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/pyfits/scripts
> copying pyfits/scripts/fitsheader.py ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/pyfits/scripts
> copying pyfits/scripts/__init__.py ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/pyfits/scripts
> copying pyfits/scripts/fitsdiff.py ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/pyfits/scripts
> creating /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/pyfits/tests
> copying pyfits/tests/test_header.py ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/pyfits/tests
> copying pyfits/tests/test_checksum.py ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/pyfits/tests
> copying pyfits/tests/test_diff.py ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/pyfits/tests
> copying pyfits/tests/test_table.py ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/pyfits/tests
> copying pyfits/tests/test_core.py ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/pyfits/tests
> copying pyfits/tests/__init__.py ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/pyfits/tests
> copying pyfits/tests/util.py ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/pyfits/tests
> copying pyfits/tests/test_image.py ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/pyfits/tests
> copying pyfits/tests/test_uint.py ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/pyfits/tests
> copying pyfits/tests/test_nonstandard.py ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/pyfits/tests
> copying pyfits/tests/test_structured.py ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/pyfits/tests
> copying pyfits/tests/test_hdulist.py ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/pyfits/tests
> copying pyfits/tests/test_division.py ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/pyfits/tests
> copying pyfits/tests/test_util.py ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/pyfits/tests
> copying pyfits/tests/test_groups.py ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/pyfits/tests
> creating /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/pyfits/tests/data
> copying pyfits/tests/data/stddata.fits ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/pyfits/tests/data
> copying pyfits/tests/data/checksum.fits ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/pyfits/tests/data
> copying pyfits/tests/data/test0.fits ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/pyfits/tests/data
> copying pyfits/tests/data/table.fits ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/pyfits/tests/data
> copying pyfits/tests/data/o4sp040b0_raw.fits ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/pyfits/tests/data
> copying pyfits/tests/data/tb.fits ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/pyfits/tests/data
> copying pyfits/tests/data/arange.fits ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/pyfits/tests/data
> copying pyfits/tests/data/scale.fits ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/pyfits/tests/data
> copying pyfits/tests/data/random_groups.fits ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/pyfits/tests/data
> copying pyfits/tests/data/blank.fits ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/pyfits/tests/data
> copying pyfits/tests/data/fixed-1890.fits ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/pyfits/tests/data
> copying pyfits/tests/data/memtest.fits ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/pyfits/tests/data
> copying pyfits/tests/data/zerowidth.fits ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/pyfits/tests/data
> copying pyfits/tests/data/ascii.fits ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/pyfits/tests/data
> copying pyfits/tests/data/comp.fits ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/pyfits/tests/data
> copying pyfits/tests/data/tdim.fits ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/pyfits/tests/data
> running build_ext
> running pre_hook stsci.distutils.hooks.numpy_extension_hook for command
> build_ext
> building 'pyfits.compression' extension
> creating build
> creating build/temp.linux-x86_64-2.7
> creating build/temp.linux-x86_64-2.7/src
> x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall
> -Wstrict-prototypes -fno-strict-aliasing -g -O2
> -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat
> -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
> -I/usr/lib/python2.7/dist-packages/numpy/core/include
> -I/usr/include/python2.7 -c src/compressionmodule.c -o
> build/temp.linux-x86_64-2.7/src/compressionmodule.o
> -Wno-declaration-after-statement -Wno-unused-variable -Wno-parentheses
> -Wno-uninitialized -Wno-format -Wno-strict-prototypes -Wno-unused
> -Wno-comments -Wno-switch
> In file included from
> /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1788:0,
> from
> /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:18,
> from
> /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
> from src/compressionmodule.c:97:
> /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2:
> warning: #warning "Using deprecated NumPy API, disable it by " "#defining
> NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
> #warning "Using deprecated NumPy API, disable it by " \
> ^~~~~~~
> src/compressionmodule.c: In function 'get_header_string':
> src/compressionmodule.c:255:14: warning: assignment makes integer from
> pointer without a cast [-Wint-conversion]
> *val = def;
> ^
> x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions
> -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall
> -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g
> -fdebug-prefix-map=/build/python2.7-U_f_pV/python2.7-2.7.13~rc1=.
> -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -g -O2
> -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat
> -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2
> build/temp.linux-x86_64-2.7/src/compressionmodule.o -lcfitsio -o
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/pyfits/compression.so
> running build_scripts
> creating build/scripts-2.7
> copying and adjusting scripts/fitscheck -> build/scripts-2.7
> copying and adjusting scripts/fitsdiff -> build/scripts-2.7
> copying and adjusting scripts/fitshead -> build/scripts-2.7
> changing mode of build/scripts-2.7/fitscheck from 664 to 775
> changing mode of build/scripts-2.7/fitsdiff from 664 to 775
> changing mode of build/scripts-2.7/fitshead from 664 to 775
> I: pybuild base:184: /usr/bin/python3 setup.py build
> running build
> running build_py
> creating /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_3.5/build/pyfits
> copying pyfits/file.py -> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_3.5/build/pyfits
> copying pyfits/card.py -> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_3.5/build/pyfits
> copying pyfits/verify.py ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_3.5/build/pyfits
> copying pyfits/_numpy_hacks.py ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_3.5/build/pyfits
> copying pyfits/py3compat.py ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_3.5/build/pyfits
> copying pyfits/header.py ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_3.5/build/pyfits
> copying pyfits/core.py -> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_3.5/build/pyfits
> copying pyfits/_release.py ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_3.5/build/pyfits
> copying pyfits/__init__.py ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_3.5/build/pyfits
> copying pyfits/column.py ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_3.5/build/pyfits
> copying pyfits/util.py -> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_3.5/build/pyfits
> copying pyfits/convenience.py ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_3.5/build/pyfits
> copying pyfits/version.py ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_3.5/build/pyfits
> copying pyfits/diff.py -> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_3.5/build/pyfits
> copying pyfits/fitsrec.py ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_3.5/build/pyfits
> creating /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_3.5/build/pyfits/_compat
> copying pyfits/_compat/__init__.py ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_3.5/build/pyfits/_compat
> copying pyfits/_compat/weakref.py ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_3.5/build/pyfits/_compat
> copying pyfits/_compat/odict.py ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_3.5/build/pyfits/_compat
> creating /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_3.5/build/pyfits/extern
> copying pyfits/extern/six.py ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_3.5/build/pyfits/extern
> copying pyfits/extern/__init__.py ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_3.5/build/pyfits/extern
> creating /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_3.5/build/pyfits/hdu
> copying pyfits/hdu/table.py ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_3.5/build/pyfits/hdu
> copying pyfits/hdu/image.py ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_3.5/build/pyfits/hdu
> copying pyfits/hdu/__init__.py ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_3.5/build/pyfits/hdu
> copying pyfits/hdu/compressed.py ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_3.5/build/pyfits/hdu
> copying pyfits/hdu/hdulist.py ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_3.5/build/pyfits/hdu
> copying pyfits/hdu/streaming.py ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_3.5/build/pyfits/hdu
> copying pyfits/hdu/base.py ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_3.5/build/pyfits/hdu
> copying pyfits/hdu/groups.py ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_3.5/build/pyfits/hdu
> copying pyfits/hdu/nonstandard.py ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_3.5/build/pyfits/hdu
> creating /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_3.5/build/pyfits/scripts
> copying pyfits/scripts/fitscheck.py ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_3.5/build/pyfits/scripts
> copying pyfits/scripts/fitsinfo.py ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_3.5/build/pyfits/scripts
> copying pyfits/scripts/fitsheader.py ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_3.5/build/pyfits/scripts
> copying pyfits/scripts/__init__.py ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_3.5/build/pyfits/scripts
> copying pyfits/scripts/fitsdiff.py ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_3.5/build/pyfits/scripts
> creating /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_3.5/build/pyfits/tests
> copying pyfits/tests/test_header.py ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_3.5/build/pyfits/tests
> copying pyfits/tests/test_checksum.py ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_3.5/build/pyfits/tests
> copying pyfits/tests/test_diff.py ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_3.5/build/pyfits/tests
> copying pyfits/tests/test_table.py ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_3.5/build/pyfits/tests
> copying pyfits/tests/test_core.py ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_3.5/build/pyfits/tests
> copying pyfits/tests/__init__.py ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_3.5/build/pyfits/tests
> copying pyfits/tests/util.py ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_3.5/build/pyfits/tests
> copying pyfits/tests/test_image.py ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_3.5/build/pyfits/tests
> copying pyfits/tests/test_uint.py ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_3.5/build/pyfits/tests
> copying pyfits/tests/test_nonstandard.py ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_3.5/build/pyfits/tests
> copying pyfits/tests/test_structured.py ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_3.5/build/pyfits/tests
> copying pyfits/tests/test_hdulist.py ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_3.5/build/pyfits/tests
> copying pyfits/tests/test_division.py ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_3.5/build/pyfits/tests
> copying pyfits/tests/test_util.py ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_3.5/build/pyfits/tests
> copying pyfits/tests/test_groups.py ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_3.5/build/pyfits/tests
> creating /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_3.5/build/pyfits/tests/data
> copying pyfits/tests/data/stddata.fits ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_3.5/build/pyfits/tests/data
> copying pyfits/tests/data/checksum.fits ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_3.5/build/pyfits/tests/data
> copying pyfits/tests/data/test0.fits ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_3.5/build/pyfits/tests/data
> copying pyfits/tests/data/table.fits ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_3.5/build/pyfits/tests/data
> copying pyfits/tests/data/o4sp040b0_raw.fits ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_3.5/build/pyfits/tests/data
> copying pyfits/tests/data/tb.fits ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_3.5/build/pyfits/tests/data
> copying pyfits/tests/data/arange.fits ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_3.5/build/pyfits/tests/data
> copying pyfits/tests/data/scale.fits ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_3.5/build/pyfits/tests/data
> copying pyfits/tests/data/random_groups.fits ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_3.5/build/pyfits/tests/data
> copying pyfits/tests/data/blank.fits ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_3.5/build/pyfits/tests/data
> copying pyfits/tests/data/fixed-1890.fits ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_3.5/build/pyfits/tests/data
> copying pyfits/tests/data/memtest.fits ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_3.5/build/pyfits/tests/data
> copying pyfits/tests/data/zerowidth.fits ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_3.5/build/pyfits/tests/data
> copying pyfits/tests/data/ascii.fits ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_3.5/build/pyfits/tests/data
> copying pyfits/tests/data/comp.fits ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_3.5/build/pyfits/tests/data
> copying pyfits/tests/data/tdim.fits ->
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_3.5/build/pyfits/tests/data
> running build_ext
> running pre_hook stsci.distutils.hooks.numpy_extension_hook for command
> build_ext
> building 'pyfits.compression' extension
> creating build/temp.linux-x86_64-3.5
> creating build/temp.linux-x86_64-3.5/src
> x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall
> -Wstrict-prototypes -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=.
> -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time
> -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include
> -I/usr/include/python3.5m -c src/compressionmodule.c -o
> build/temp.linux-x86_64-3.5/src/compressionmodule.o
> -Wno-declaration-after-statement -Wno-unused-variable -Wno-parentheses
> -Wno-uninitialized -Wno-format -Wno-strict-prototypes -Wno-unused
> -Wno-comments -Wno-switch
> In file included from
> /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1788:0,
> from
> /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:18,
> from
> /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
> from src/compressionmodule.c:97:
> /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2:
> warning: #warning "Using deprecated NumPy API, disable it by " "#defining
> NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
> #warning "Using deprecated NumPy API, disable it by " \
> ^~~~~~~
> src/compressionmodule.c: In function 'get_header_string':
> src/compressionmodule.c:255:14: warning: assignment makes integer from
> pointer without a cast [-Wint-conversion]
> *val = def;
> ^
> x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions
> -Wl,-z,relro -Wl,-z,relro -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=.
> -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time
> -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.5/src/compressionmodule.o
> -lcfitsio -o
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_3.5/build/pyfits/compression.cpython-35m-x86_64-linux-gnu.so
> running build_scripts
> creating build/scripts-3.5
> copying and adjusting scripts/fitscheck -> build/scripts-3.5
> copying and adjusting scripts/fitsdiff -> build/scripts-3.5
> copying and adjusting scripts/fitshead -> build/scripts-3.5
> changing mode of build/scripts-3.5/fitscheck from 664 to 775
> changing mode of build/scripts-3.5/fitsdiff from 664 to 775
> changing mode of build/scripts-3.5/fitshead from 664 to 775
> dh_auto_test -O--buildsystem=pybuild -O--parallel
> I: pybuild base:184: cd /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build;
> python2.7 -m nose
> ................................................................................................................................................................................................................................................................................................................................................../<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/pyfits/hdu/image.py:515:
> VerifyWarning: Invalid value for 'BLANK' keyword in header: 'nan' The
> 'BLANK' keyword must be an integer. It will be ignored in the meantime.
> warnings.warn(msg, VerifyWarning)
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/pyfits/hdu/image.py:515:
> VerifyWarning: Invalid 'BLANK' keyword in header. The 'BLANK' keyword is
> only applicable to integer data, and will be ignored in this HDU.
> warnings.warn(msg, VerifyWarning)
> ........../<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/pyfits/hdu/image.py:515:
> VerifyWarning: Invalid 'BLANK' keyword in header. The 'BLANK' keyword is
> only applicable to integer data, and will be ignored in this HDU.
> warnings.warn(msg, VerifyWarning)
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/pyfits/hdu/image.py:515:
> VerifyWarning: Invalid 'BLANK' keyword in header. The 'BLANK' keyword is
> only applicable to integer data, and will be ignored in this HDU.
> warnings.warn(msg, VerifyWarning)
> ../<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/pyfits/hdu/image.py:848:
> VisibleDeprecationWarning: boolean index did not match indexed array along
> dimension 0; dimension is 10 but corresponding boolean dimension is 3
> ks = np.arange(axis, dtype=int)[key]
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/pyfits/hdu/image.py:848:
> VisibleDeprecationWarning: boolean index did not match indexed array along
> dimension 0; dimension is 10 but corresponding boolean dimension is 3
> ks = np.arange(axis, dtype=int)[key]
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/pyfits/hdu/image.py:848:
> VisibleDeprecationWarning: boolean index did not match indexed array along
> dimension 0; dimension is 10 but corresponding boolean dimension is 3
> ks = np.arange(axis, dtype=int)[key]
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/pyfits/hdu/image.py:848:
> VisibleDeprecationWarning: boolean index did not match indexed array along
> dimension 0; dimension is 10 but corresponding boolean dimension is 3
> ks = np.arange(axis, dtype=int)[key]
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/pyfits/hdu/image.py:848:
> VisibleDeprecationWarning: boolean index did not match indexed array along
> dimension 0; dimension is 10 but corresponding boolean dimension is 3
> ks = np.arange(axis, dtype=int)[key]
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/pyfits/hdu/image.py:848:
> VisibleDeprecationWarning: boolean index did not match indexed array along
> dimension 0; dimension is 10 but corresponding boolean dimension is 3
> ks = np.arange(axis, dtype=int)[key]
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/pyfits/hdu/image.py:848:
> VisibleDeprecationWarning: boolean index did not match indexed array along
> dimension 0; dimension is 10 but corresponding boolean dimension is 3
> ks = np.arange(axis, dtype=int)[key]
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/pyfits/tests/test_image.py:342:
> VisibleDeprecationWarning: boolean index did not match indexed array along
> dimension 1; dimension is 10 but corresponding boolean dimension is 3
> dat[:, np.array([True, False, True]), :])
> .............................../<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/pyfits/file.py:372:
> UserWarning: Overwriting existing file '/tmp/pyfits-test-HfQOcK/test.fits'.
> warnings.warn("Overwriting existing file %r." % self.name)
> ..................F.................................../<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/pyfits/hdu/hdulist.py:115:
> PyfitsDeprecationWarning: The uint16 keyword argument is deprecated since
> v3.4.0. Use the uint argument instead.
> 'the uint argument instead.', PyfitsDeprecationWarning)
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/pyfits/hdu/hdulist.py:115:
> PyfitsDeprecationWarning: The uint16 keyword argument is deprecated since
> v3.4.0. Use the uint argument instead.
> 'the uint argument instead.', PyfitsDeprecationWarning)
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/pyfits/hdu/hdulist.py:115:
> PyfitsDeprecationWarning: The uint16 keyword argument is deprecated since
> v3.4.0. Use the uint argument instead.
> 'the uint argument instead.', PyfitsDeprecationWarning)
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/pyfits/hdu/hdulist.py:115:
> PyfitsDeprecationWarning: The uint16 keyword argument is deprecated since
> v3.4.0. Use the uint argument instead.
> 'the uint argument instead.', PyfitsDeprecationWarning)
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/pyfits/hdu/hdulist.py:115:
> PyfitsDeprecationWarning: The uint16 keyword argument is deprecated since
> v3.4.0. Use the uint argument instead.
> 'the uint argument instead.', PyfitsDeprecationWarning)
> ...
> ======================================================================
> FAIL: pyfits.tests.test_table.TestTableFunctions.test_mask_array
> ----------------------------------------------------------------------
> Traceback (most recent call last):
> File "/usr/lib/python2.7/dist-packages/nose/case.py", line 197, in runTest
> self.test(*self.arg)
> File
> "/<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/pyfits/tests/test_table.py",
> line 866, in test_mask_array
> assert str(hdu.data) == "[('NGC1002', 12.3) ('NGC1003', 15.2)]"
> AssertionError
>
> ----------------------------------------------------------------------
> Ran 438 tests in 11.479s
>
> FAILED (failures=1)
> E: pybuild pybuild:276: test: plugin distutils failed with: exit code=1: cd
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build; python2.7 -m nose
> dh_auto_test: pybuild --test --test-nose -i python{version} -p 2.7 returned
> exit code 13
The full build log is available from:
http://aws-logs.debian.net/2016/12/19/pyfits_3.4-3_unstable.log
A list of current common problems and possible solutions is available at
http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute!
About the archive rebuild: The rebuild was done on EC2 VM instances from
Amazon Web Services, using a clean, minimal and up-to-date chroot. Every
failed build was retried once to eliminate random failures.
--- End Message ---
--- Begin Message ---
Source: pyfits
Source-Version: 1:3.4-4
We believe that the bug you reported is fixed in the latest version of
pyfits, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 848...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Aurelien Jarno <aure...@debian.org> (supplier of updated pyfits package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 1.8
Date: Tue, 20 Dec 2016 00:44:38 +0100
Source: pyfits
Binary: python-pyfits python3-pyfits pyfits-utils
Architecture: source
Version: 1:3.4-4
Distribution: unstable
Urgency: medium
Maintainer: Debian Python Modules Team
<python-modules-t...@lists.alioth.debian.org>
Changed-By: Aurelien Jarno <aure...@debian.org>
Description:
pyfits-utils - transitional package for astropy-utils
python-pyfits - Python module for reading, writing, and manipulating FITS files
python3-pyfits - Python3 module for reading, writing, and manipulating FITS
files
Closes: 848779
Changes:
pyfits (1:3.4-4) unstable; urgency=medium
.
[ Ondřej Nový ]
* Fixed VCS URL (https)
.
[ Aurelien Jarno ]
* Add patches/04-numpy-1.12.patch taken from astropy to fix the testsuite
with numpy 1.12 (closes: #848779).
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b1ffdd6f2027a566e5d471d494844a6d1df21d58 7732 pyfits_3.4-4.debian.tar.xz
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pyfits_3.4-4.debian.tar.xz
Files:
2cc1ec9cbe88dc15aca78a49fc7232f3 2399 python optional pyfits_3.4-4.dsc
36346bb1ef443d5f0dd3df66d61fdc3b 7732 python optional
pyfits_3.4-4.debian.tar.xz
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