Your message dated Thu, 10 Nov 2016 22:36:16 -0500
with message-id <20161111033616.f2k6edqmcchhk...@hopa.kiewit.dartmouth.edu>
and subject line Re: Two unanswered RC bugs in python-mne
has caused the Debian Bug report #824475,
regarding python-mne: FTBFS: TraitError: The 'input' trait of a
QuadricDecimation instance is 'read only'.
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)
--
824475: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=824475
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: python-mne
Version: 0.11+dfsg-1
Severity: serious
Justification: fails to build from source
User: reproducible-bui...@lists.alioth.debian.org
Usertags: ftbfs
X-Debbugs-Cc: reproducible-bui...@lists.alioth.debian.org
Dear Maintainer,
python-mne fails to build from source in unstable/amd64:
[..]
copying mne/time_frequency/__init__.py ->
build/lib.linux-x86_64-2.7/mne/time_frequency
copying mne/time_frequency/_stockwell.py ->
build/lib.linux-x86_64-2.7/mne/time_frequency
copying mne/time_frequency/ar.py ->
build/lib.linux-x86_64-2.7/mne/time_frequency
copying mne/time_frequency/tfr.py ->
build/lib.linux-x86_64-2.7/mne/time_frequency
copying mne/time_frequency/psd.py ->
build/lib.linux-x86_64-2.7/mne/time_frequency
copying mne/time_frequency/stft.py ->
build/lib.linux-x86_64-2.7/mne/time_frequency
copying mne/time_frequency/csd.py ->
build/lib.linux-x86_64-2.7/mne/time_frequency
copying mne/time_frequency/multitaper.py ->
build/lib.linux-x86_64-2.7/mne/time_frequency
creating build/lib.linux-x86_64-2.7/mne/time_frequency/tests
copying mne/time_frequency/tests/test_psd.py ->
build/lib.linux-x86_64-2.7/mne/time_frequency/tests
copying mne/time_frequency/tests/__init__.py ->
build/lib.linux-x86_64-2.7/mne/time_frequency/tests
copying mne/time_frequency/tests/test_stockwell.py ->
build/lib.linux-x86_64-2.7/mne/time_frequency/tests
copying mne/time_frequency/tests/test_csd.py ->
build/lib.linux-x86_64-2.7/mne/time_frequency/tests
copying mne/time_frequency/tests/test_multitaper.py ->
build/lib.linux-x86_64-2.7/mne/time_frequency/tests
copying mne/time_frequency/tests/test_ar.py ->
build/lib.linux-x86_64-2.7/mne/time_frequency/tests
copying mne/time_frequency/tests/test_stft.py ->
build/lib.linux-x86_64-2.7/mne/time_frequency/tests
copying mne/time_frequency/tests/test_tfr.py ->
build/lib.linux-x86_64-2.7/mne/time_frequency/tests
creating build/lib.linux-x86_64-2.7/mne/realtime
copying mne/realtime/__init__.py -> build/lib.linux-x86_64-2.7/mne/realtime
copying mne/realtime/mockclient.py -> build/lib.linux-x86_64-2.7/mne/realtime
copying mne/realtime/epochs.py -> build/lib.linux-x86_64-2.7/mne/realtime
copying mne/realtime/stim_server_client.py ->
build/lib.linux-x86_64-2.7/mne/realtime
copying mne/realtime/fieldtrip_client.py ->
build/lib.linux-x86_64-2.7/mne/realtime
copying mne/realtime/client.py -> build/lib.linux-x86_64-2.7/mne/realtime
creating build/lib.linux-x86_64-2.7/mne/realtime/tests
copying mne/realtime/tests/__init__.py ->
build/lib.linux-x86_64-2.7/mne/realtime/tests
copying mne/realtime/tests/test_fieldtrip_client.py ->
build/lib.linux-x86_64-2.7/mne/realtime/tests
copying mne/realtime/tests/test_stim_client_server.py ->
build/lib.linux-x86_64-2.7/mne/realtime/tests
copying mne/realtime/tests/test_mockclient.py ->
build/lib.linux-x86_64-2.7/mne/realtime/tests
creating build/lib.linux-x86_64-2.7/mne/decoding
copying mne/decoding/__init__.py -> build/lib.linux-x86_64-2.7/mne/decoding
copying mne/decoding/base.py -> build/lib.linux-x86_64-2.7/mne/decoding
copying mne/decoding/time_gen.py -> build/lib.linux-x86_64-2.7/mne/decoding
copying mne/decoding/mixin.py -> build/lib.linux-x86_64-2.7/mne/decoding
copying mne/decoding/transformer.py -> build/lib.linux-x86_64-2.7/mne/decoding
copying mne/decoding/ems.py -> build/lib.linux-x86_64-2.7/mne/decoding
copying mne/decoding/csp.py -> build/lib.linux-x86_64-2.7/mne/decoding
creating build/lib.linux-x86_64-2.7/mne/decoding/tests
copying mne/decoding/tests/__init__.py ->
build/lib.linux-x86_64-2.7/mne/decoding/tests
copying mne/decoding/tests/test_csp.py ->
build/lib.linux-x86_64-2.7/mne/decoding/tests
copying mne/decoding/tests/test_ems.py ->
build/lib.linux-x86_64-2.7/mne/decoding/tests
copying mne/decoding/tests/test_transformer.py ->
build/lib.linux-x86_64-2.7/mne/decoding/tests
copying mne/decoding/tests/test_time_gen.py ->
build/lib.linux-x86_64-2.7/mne/decoding/tests
copying mne/commands/utils.py -> build/lib.linux-x86_64-2.7/mne/commands
copying mne/commands/mne_coreg.py -> build/lib.linux-x86_64-2.7/mne/commands
copying mne/commands/__init__.py -> build/lib.linux-x86_64-2.7/mne/commands
copying mne/commands/mne_make_scalp_surfaces.py ->
build/lib.linux-x86_64-2.7/mne/commands
copying mne/commands/mne_browse_raw.py ->
build/lib.linux-x86_64-2.7/mne/commands
copying mne/commands/mne_flash_bem.py ->
build/lib.linux-x86_64-2.7/mne/commands
copying mne/commands/mne_compute_proj_ecg.py ->
build/lib.linux-x86_64-2.7/mne/commands
copying mne/commands/mne_show_fiff.py ->
build/lib.linux-x86_64-2.7/mne/commands
copying mne/commands/mne_watershed_bem.py ->
build/lib.linux-x86_64-2.7/mne/commands
copying mne/commands/mne_surf2bem.py ->
build/lib.linux-x86_64-2.7/mne/commands
copying mne/commands/mne_report.py -> build/lib.linux-x86_64-2.7/mne/commands
copying mne/commands/mne_maxfilter.py ->
build/lib.linux-x86_64-2.7/mne/commands
copying mne/commands/mne_compute_proj_eog.py ->
build/lib.linux-x86_64-2.7/mne/commands
copying mne/commands/mne_clean_eog_ecg.py ->
build/lib.linux-x86_64-2.7/mne/commands
copying mne/commands/mne_kit2fiff.py ->
build/lib.linux-x86_64-2.7/mne/commands
copying mne/commands/mne_bti2fiff.py ->
build/lib.linux-x86_64-2.7/mne/commands
copying mne/commands/mne_freeview_bem_surfaces.py ->
build/lib.linux-x86_64-2.7/mne/commands
copying mne/commands/mne_compare_fiff.py ->
build/lib.linux-x86_64-2.7/mne/commands
creating build/lib.linux-x86_64-2.7/mne/channels
copying mne/channels/__init__.py -> build/lib.linux-x86_64-2.7/mne/channels
copying mne/channels/layout.py -> build/lib.linux-x86_64-2.7/mne/channels
copying mne/channels/channels.py -> build/lib.linux-x86_64-2.7/mne/channels
copying mne/channels/montage.py -> build/lib.linux-x86_64-2.7/mne/channels
copying mne/channels/interpolation.py ->
build/lib.linux-x86_64-2.7/mne/channels
creating build/lib.linux-x86_64-2.7/mne/channels/tests
copying mne/channels/tests/test_layout.py ->
build/lib.linux-x86_64-2.7/mne/channels/tests
copying mne/channels/tests/__init__.py ->
build/lib.linux-x86_64-2.7/mne/channels/tests
copying mne/channels/tests/test_interpolation.py ->
build/lib.linux-x86_64-2.7/mne/channels/tests
copying mne/channels/tests/test_montage.py ->
build/lib.linux-x86_64-2.7/mne/channels/tests
copying mne/channels/tests/test_channels.py ->
build/lib.linux-x86_64-2.7/mne/channels/tests
copying mne/data/mne_analyze.sel -> build/lib.linux-x86_64-2.7/mne/data
copying mne/data/icos.fif.gz -> build/lib.linux-x86_64-2.7/mne/data
copying mne/data/coil_def.dat -> build/lib.linux-x86_64-2.7/mne/data
copying mne/data/coil_def_Elekta.dat -> build/lib.linux-x86_64-2.7/mne/data
creating build/lib.linux-x86_64-2.7/mne/data/helmets
copying mne/data/helmets/Magnes_3600wh.fif.gz ->
build/lib.linux-x86_64-2.7/mne/data/helmets
copying mne/data/helmets/306m_rt.fif.gz ->
build/lib.linux-x86_64-2.7/mne/data/helmets
copying mne/data/helmets/Magnes_2500wh.fif.gz ->
build/lib.linux-x86_64-2.7/mne/data/helmets
copying mne/data/helmets/122m.fif.gz ->
build/lib.linux-x86_64-2.7/mne/data/helmets
copying mne/data/helmets/BabySQUID.fif.gz ->
build/lib.linux-x86_64-2.7/mne/data/helmets
copying mne/data/helmets/KIT.fif.gz ->
build/lib.linux-x86_64-2.7/mne/data/helmets
copying mne/data/helmets/CTF_275.fif.gz ->
build/lib.linux-x86_64-2.7/mne/data/helmets
copying mne/data/helmets/306m.fif.gz ->
build/lib.linux-x86_64-2.7/mne/data/helmets
copying mne/data/FreeSurferColorLUT.txt -> build/lib.linux-x86_64-2.7/mne/data
creating build/lib.linux-x86_64-2.7/mne/channels/data
creating build/lib.linux-x86_64-2.7/mne/channels/data/layouts
copying mne/channels/data/layouts/KIT-AD.lout ->
build/lib.linux-x86_64-2.7/mne/channels/data/layouts
copying mne/channels/data/layouts/EGI256.lout ->
build/lib.linux-x86_64-2.7/mne/channels/data/layouts
copying mne/channels/data/layouts/Vectorview-mag.lout ->
build/lib.linux-x86_64-2.7/mne/channels/data/layouts
copying mne/channels/data/layouts/magnesWH3600.lout ->
build/lib.linux-x86_64-2.7/mne/channels/data/layouts
copying mne/channels/data/layouts/Vectorview-all.lout ->
build/lib.linux-x86_64-2.7/mne/channels/data/layouts
copying mne/channels/data/layouts/Vectorview-grad.lout ->
build/lib.linux-x86_64-2.7/mne/channels/data/layouts
copying mne/channels/data/layouts/CTF-275.lout ->
build/lib.linux-x86_64-2.7/mne/channels/data/layouts
copying mne/channels/data/layouts/KIT-157.lout ->
build/lib.linux-x86_64-2.7/mne/channels/data/layouts
copying mne/channels/data/layouts/CTF151.lay ->
build/lib.linux-x86_64-2.7/mne/channels/data/layouts
copying mne/channels/data/layouts/CTF275.lay ->
build/lib.linux-x86_64-2.7/mne/channels/data/layouts
copying mne/channels/data/layouts/EEG1005.lay ->
build/lib.linux-x86_64-2.7/mne/channels/data/layouts
copying mne/channels/data/layouts/biosemi.lay ->
build/lib.linux-x86_64-2.7/mne/channels/data/layouts
creating build/lib.linux-x86_64-2.7/mne/channels/data/montages
copying mne/channels/data/montages/GSN-HydroCel-128.sfp ->
build/lib.linux-x86_64-2.7/mne/channels/data/montages
copying mne/channels/data/montages/GSN-HydroCel-129.sfp ->
build/lib.linux-x86_64-2.7/mne/channels/data/montages
copying mne/channels/data/montages/GSN-HydroCel-64_1.0.sfp ->
build/lib.linux-x86_64-2.7/mne/channels/data/montages
copying mne/channels/data/montages/GSN-HydroCel-257.sfp ->
build/lib.linux-x86_64-2.7/mne/channels/data/montages
copying mne/channels/data/montages/GSN-HydroCel-32.sfp ->
build/lib.linux-x86_64-2.7/mne/channels/data/montages
copying mne/channels/data/montages/GSN-HydroCel-65_1.0.sfp ->
build/lib.linux-x86_64-2.7/mne/channels/data/montages
copying mne/channels/data/montages/GSN-HydroCel-256.sfp ->
build/lib.linux-x86_64-2.7/mne/channels/data/montages
copying mne/channels/data/montages/biosemi256.txt ->
build/lib.linux-x86_64-2.7/mne/channels/data/montages
copying mne/channels/data/montages/biosemi64.txt ->
build/lib.linux-x86_64-2.7/mne/channels/data/montages
copying mne/channels/data/montages/biosemi160.txt ->
build/lib.linux-x86_64-2.7/mne/channels/data/montages
copying mne/channels/data/montages/biosemi16.txt ->
build/lib.linux-x86_64-2.7/mne/channels/data/montages
copying mne/channels/data/montages/biosemi32.txt ->
build/lib.linux-x86_64-2.7/mne/channels/data/montages
copying mne/channels/data/montages/easycap-M10.txt ->
build/lib.linux-x86_64-2.7/mne/channels/data/montages
copying mne/channels/data/montages/biosemi128.txt ->
build/lib.linux-x86_64-2.7/mne/channels/data/montages
copying mne/channels/data/montages/easycap-M1.txt ->
build/lib.linux-x86_64-2.7/mne/channels/data/montages
copying mne/channels/data/montages/standard_alphabetic.elc ->
build/lib.linux-x86_64-2.7/mne/channels/data/montages
copying mne/channels/data/montages/standard_postfixed.elc ->
build/lib.linux-x86_64-2.7/mne/channels/data/montages
copying mne/channels/data/montages/standard_prefixed.elc ->
build/lib.linux-x86_64-2.7/mne/channels/data/montages
copying mne/channels/data/montages/standard_1020.elc ->
build/lib.linux-x86_64-2.7/mne/channels/data/montages
copying mne/channels/data/montages/standard_1005.elc ->
build/lib.linux-x86_64-2.7/mne/channels/data/montages
copying mne/channels/data/montages/standard_primed.elc ->
build/lib.linux-x86_64-2.7/mne/channels/data/montages
creating build/lib.linux-x86_64-2.7/mne/channels/data/neighbors
copying mne/channels/data/neighbors/KIT-157_neighb.mat ->
build/lib.linux-x86_64-2.7/mne/channels/data/neighbors
copying mne/channels/data/neighbors/easycap128ch-avg_neighb.mat ->
build/lib.linux-x86_64-2.7/mne/channels/data/neighbors
copying mne/channels/data/neighbors/bti248grad_neighb.mat ->
build/lib.linux-x86_64-2.7/mne/channels/data/neighbors
copying mne/channels/data/neighbors/neuromag122_neighb.mat ->
build/lib.linux-x86_64-2.7/mne/channels/data/neighbors
copying mne/channels/data/neighbors/ctf151_neighb.mat ->
build/lib.linux-x86_64-2.7/mne/channels/data/neighbors
copying mne/channels/data/neighbors/ctf275_neighb.mat ->
build/lib.linux-x86_64-2.7/mne/channels/data/neighbors
copying mne/channels/data/neighbors/bti248_neighb.mat ->
build/lib.linux-x86_64-2.7/mne/channels/data/neighbors
copying mne/channels/data/neighbors/neuromag306mag_neighb.mat ->
build/lib.linux-x86_64-2.7/mne/channels/data/neighbors
copying mne/channels/data/neighbors/easycapM14_neighb.mat ->
build/lib.linux-x86_64-2.7/mne/channels/data/neighbors
copying mne/channels/data/neighbors/biosemi16_neighb.mat ->
build/lib.linux-x86_64-2.7/mne/channels/data/neighbors
copying mne/channels/data/neighbors/biosemi64_neighb.mat ->
build/lib.linux-x86_64-2.7/mne/channels/data/neighbors
copying mne/channels/data/neighbors/KIT-208_neighb.mat ->
build/lib.linux-x86_64-2.7/mne/channels/data/neighbors
copying mne/channels/data/neighbors/neuromag306planar_neighb.mat ->
build/lib.linux-x86_64-2.7/mne/channels/data/neighbors
copying mne/channels/data/neighbors/easycap64ch-avg_neighb.mat ->
build/lib.linux-x86_64-2.7/mne/channels/data/neighbors
copying mne/channels/data/neighbors/easycapM11_neighb.mat ->
build/lib.linux-x86_64-2.7/mne/channels/data/neighbors
copying mne/channels/data/neighbors/bti148_neighb.mat ->
build/lib.linux-x86_64-2.7/mne/channels/data/neighbors
copying mne/channels/data/neighbors/biosemi32_neighb.mat ->
build/lib.linux-x86_64-2.7/mne/channels/data/neighbors
copying mne/channels/data/neighbors/easycapM1_neighb.mat ->
build/lib.linux-x86_64-2.7/mne/channels/data/neighbors
copying mne/channels/data/neighbors/ctf64_neighb.mat ->
build/lib.linux-x86_64-2.7/mne/channels/data/neighbors
copying mne/channels/data/neighbors/easycap32ch-avg_neighb.mat ->
build/lib.linux-x86_64-2.7/mne/channels/data/neighbors
copying mne/channels/data/neighbors/easycapM15_neighb.mat ->
build/lib.linux-x86_64-2.7/mne/channels/data/neighbors
creating build/lib.linux-x86_64-2.7/mne/gui/help
copying mne/gui/help/kit2fiff.json -> build/lib.linux-x86_64-2.7/mne/gui/help
creating build/lib.linux-x86_64-2.7/mne/html
copying mne/html/jquery-ui.min.css -> build/lib.linux-x86_64-2.7/mne/html
copying mne/html/bootstrap.min.css -> build/lib.linux-x86_64-2.7/mne/html
running build_scripts
creating build/scripts.linux-x86_64-2.7
copying and adjusting bin/mne -> build/scripts.linux-x86_64-2.7
changing mode of build/scripts.linux-x86_64-2.7/mne from 644 to 755
yui-compressor debian/JS/bootstrap/bootstrap.js >
/home/lamby/temp/cdt.20160516135655.JhsMkQPWhH.python-mne/python-mne-0.11+dfsg/mne/html/bootstrap.min.js
echo -e "\n" >>
/home/lamby/temp/cdt.20160516135655.JhsMkQPWhH.python-mne/python-mne-0.11+dfsg/mne/html/bootstrap.min.js
make[1]: Leaving directory
'/home/lamby/temp/cdt.20160516135655.JhsMkQPWhH.python-mne/python-mne-0.11+dfsg'
debian/rules override_dh_auto_test
make[1]: Entering directory
'/home/lamby/temp/cdt.20160516135655.JhsMkQPWhH.python-mne/python-mne-0.11+dfsg'
MNE_DONTWRITE_HOME=true MNE_SKIP_SAMPLE_DATASET_TESTS=true
MNE_FORCE_SERIAL=true MNE_SKIP_NETWORK_TESTS=1 \
xvfb-run --auto-servernum --server-num=20 -s "-screen 0 1024x768x24 -ac
+extension GLX +render -noreset" \
nosetests mne
SSSSSSSS....
Normal return from subroutine COBYLA
NFVALS = 154 F = 1.313356E-03 MAXCV = 0.000000E+00
X =-2.792911E-03 1.040626E-02 5.626768E-02 9.024506E-02
Normal return from subroutine COBYLA
NFVALS = 154 F = 1.313356E-03 MAXCV = 0.000000E+00
X =-2.792911E-03 1.040626E-02 5.626768E-02 9.024506E-02
.................../usr/lib/python2.7/dist-packages/pyface/toolkit.py:43:
DeprecationWarning: Default toolkit will change to 'qt4' in PyFace 5.0
DeprecationWarning)
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[Parallel(n_jobs=1)]: Done 2 out of 2 | elapsed: 0.0s finished
[Parallel(n_jobs=1)]: Done 2 out of 2 | elapsed: 0.0s finished
[Parallel(n_jobs=1)]: Done 0 out of 0 | elapsed: 0.0s finished
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[Parallel(n_jobs=1)]: Done 2 out of 2 | elapsed: 0.0s finished
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[Parallel(n_jobs=1)]: Done 2 out of 2 | elapsed: 0.0s finished
[Parallel(n_jobs=1)]: Done 0 out of 0 | elapsed: 0.0s finished
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[Parallel(n_jobs=1)]: Done 2 out of 2 | elapsed: 0.0s finished
[Parallel(n_jobs=1)]: Done 2 out of 2 | elapsed: 0.0s finished
[Parallel(n_jobs=1)]: Done 2 out of 2 | elapsed: 0.0s finished
[Parallel(n_jobs=1)]: Done 0 out of 0 | elapsed: 0.0s finished
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[Parallel(n_jobs=1)]: Done 2 out of 2 | elapsed: 0.0s finished
[Parallel(n_jobs=1)]: Done 2 out of 2 | elapsed: 0.0s finished
[Parallel(n_jobs=1)]: Done 2 out of 2 | elapsed: 0.0s finished
[Parallel(n_jobs=1)]: Done 0 out of 0 | elapsed: 0.0s finished
.......SS.......................SSSSSSSSS.SSSSSSSSSSSSS....SS................S......SS...SSSSSSS.SSSSSSSSSSSSS.SSS.SSS...........S..........S....SSSSSSSSSSSSSSSSSSSSSSSS/home/lamby/temp/cdt.20160516135655.JhsMkQPWhH.python-mne/python-mne-0.11+dfsg/mne/preprocessing/tests/test_ctps.py:36:
DeprecationWarning: This function is deprecated. Please call randint(-150, 150
+ 1) instead
rand_ints = rng.random_integers(-j_extent, j_extent, n_trials)
/home/lamby/temp/cdt.20160516135655.JhsMkQPWhH.python-mne/python-mne-0.11+dfsg/mne/preprocessing/tests/test_ctps.py:36:
DeprecationWarning: This function is deprecated. Please call randint(-300, 300
+ 1) instead
rand_ints = rng.random_integers(-j_extent, j_extent, n_trials)
..S...............SSSSSSSSSSS...[Parallel(n_jobs=1)]: Done 3 out of 3 |
elapsed: 0.6s finished
......S...SSSSSSSSSS.............SS..S..SS.............S...SSSSS.................S.SSS.......S.....S.SS...SSS..............SSSSS..S...........S/home/lamby/temp/cdt.20160516135655.JhsMkQPWhH.python-mne/python-mne-0.11+dfsg/mne/utils.py:268:
UserWarning: This filename (test.fif) does not conform to MNE naming
conventions. All epochs files should end with -epo.fif or -epo.fif.gz
'%s' % (fname, filetype, print_endings))
.........[Parallel(n_jobs=1)]: Done 17 tasks | elapsed: 0.0s
[Parallel(n_jobs=1)]: Done 71 tasks | elapsed: 0.0s
[Parallel(n_jobs=1)]: Done 161 tasks | elapsed: 0.1s
[Parallel(n_jobs=1)]: Done 287 tasks | elapsed: 0.2s
[Parallel(n_jobs=1)]: Done 449 tasks | elapsed: 0.3s
[Parallel(n_jobs=1)]: Done 647 tasks | elapsed: 0.4s
[Parallel(n_jobs=1)]: Done 752 out of 752 | elapsed: 0.4s finished
........................................
Normal return from subroutine COBYLA
NFVALS = 161 F = 1.310622E-03 MAXCV = 0.000000E+00
X =-2.848050E-03 1.048531E-02 5.620598E-02 9.030976E-02
...S.....[Parallel(n_jobs=1)]: Done 2 out of 2 | elapsed: 0.0s finished
[Parallel(n_jobs=1)]: Done 2 out of 2 | elapsed: 0.0s finished
.[Parallel(n_jobs=1)]: Done 3 out of 3 | elapsed: 0.0s finished
[Parallel(n_jobs=1)]: Done 3 out of 3 | elapsed: 0.0s finished
...................SSSSSSSSSSS..S[Parallel(n_jobs=1)]: Done 7 out of 7 |
elapsed: 0.1s finished
.[Parallel(n_jobs=1)]: Done 17 tasks | elapsed: 0.0s
[Parallel(n_jobs=1)]: Done 71 tasks | elapsed: 0.0s
[Parallel(n_jobs=1)]: Done 161 tasks | elapsed: 0.0s
[Parallel(n_jobs=1)]: Done 287 tasks | elapsed: 0.1s
[Parallel(n_jobs=1)]: Done 376 out of 376 | elapsed: 0.1s finished
....SSS..SS.SSS...SSS..S.SS.SS.SSSS.SSSSSSSSSSSS.S..SSSESS.....S....................S
======================================================================
ERROR: Test triangular surface decimation
----------------------------------------------------------------------
Traceback (most recent call last):
File "/usr/lib/python2.7/dist-packages/nose/case.py", line 197, in runTest
self.test(*self.arg)
File
"/home/lamby/temp/cdt.20160516135655.JhsMkQPWhH.python-mne/python-mne-0.11+dfsg/mne/utils.py",
line 635, in dec
return function(*args, **kwargs)
File
"/home/lamby/temp/cdt.20160516135655.JhsMkQPWhH.python-mne/python-mne-0.11+dfsg/mne/tests/test_surface.py",
line 159, in test_decimate_surface
_, this_tris = decimate_surface(points, tris, n_tri)
File
"/home/lamby/temp/cdt.20160516135655.JhsMkQPWhH.python-mne/python-mne-0.11+dfsg/mne/surface.py",
line 761, in decimate_surface
return _decimate_surface(points, triangles, reduction)
File
"/home/lamby/temp/cdt.20160516135655.JhsMkQPWhH.python-mne/python-mne-0.11+dfsg/mne/surface.py",
line 725, in _decimate_surface
decimate = tvtk.QuadricDecimation(input=src, target_reduction=reduction)
File
"/usr/lib/python2.7/dist-packages/tvtk/tvtk_classes.zip/tvtk_classes/quadric_decimation.py",
line 63, in __init__
tvtk_base.TVTKBase.__init__(self, vtk.vtkQuadricDecimation, obj, update,
**traits)
File "/usr/lib/python2.7/dist-packages/tvtk/tvtk_base.py", line 307, in
__init__
super(TVTKBase, self).__init__(**traits)
File "/usr/lib/python2.7/dist-packages/traits/trait_handlers.py", line 104,
in _read_only
name, class_of( object ) )
TraitError: The 'input' trait of a QuadricDecimation instance is 'read only'.
----------------------------------------------------------------------
Ran 561 tests in 320.441s
FAILED (SKIP=199, errors=1)
debian/rules:19: recipe for target 'override_dh_auto_test' failed
make[1]: *** [override_dh_auto_test] Error 1
make[1]: Leaving directory
'/home/lamby/temp/cdt.20160516135655.JhsMkQPWhH.python-mne/python-mne-0.11+dfsg'
debian/rules:7: recipe for target 'build' failed
make: *** [build] Error 2
[..]
The full build log is attached.
Regards,
--
,''`.
: :' : Chris Lamb
`. `'` la...@debian.org / chris-lamb.co.uk
`-
python-mne.0.11+dfsg-1.unstable.amd64.log.txt.gz
Description: Binary data
--- End Message ---
--- Begin Message ---
Version: 0.13+git5-g028f2ee-1
On Thu, 10 Nov 2016, Alexandre Gramfort wrote:
> > do you mind to keep on maintaining python-mne in Debian?
> I'll do my best.
> > There are two RC critical bugs which did not received any response from
> > your side. I hope you are at least aware of
> > https://bugs.debian.org/src:python-mne
> https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=824475
> is fixed in v0.13
>
> and I pushed a commit on maint/0.12 branch a commit that should fix
> the old 0.12 release:
> https://github.com/mne-tools/mne-python/commit/ee15c3d0a27fa6a57d378dd34c3f11ab5c995362
hm - I see that I have marked it fixed in 0.12 but it never got
closed... So to make sure again -- marking fixed in 0.13+git5-g028f2ee-1
which is currently present in sid
> for:
> https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=837276
> It's a mayavi dependency issue I don't know how to help with.
> Yarik any idea?
yeah -- felt like some temp problem due to uninstallability of mayavi2,
i.e. nothing for us to fix directly. I have now verified that
python-mne 0.13+git5-g028f2ee-1 does not fail to build due to this
issue... it does fail due to annoying
https://github.com/mne-tools/mne-python/issues/3657
so I give up and will skip that test for now and will upload closing
837276 with it (to provide that it does build)
--
Yaroslav O. Halchenko
Center for Open Neuroscience http://centerforopenneuroscience.org
Dartmouth College, 419 Moore Hall, Hinman Box 6207, Hanover, NH 03755
Phone: +1 (603) 646-9834 Fax: +1 (603) 646-1419
WWW: http://www.linkedin.com/in/yarik
--- End Message ---
