Your message dated Fri, 05 Aug 2016 04:37:57 +0000 with message-id <e1bvwtr-0003mt...@franck.debian.org> and subject line Bug#833451: fixed in ncbi-blast+ 2.4.0-2 has caused the Debian Bug report #833451, regarding ncbi-blast+: FTBFS with Boost 1.61 to be marked as done.
This means that you claim that the problem has been dealt with. If this is not the case it is now your responsibility to reopen the Bug report if necessary, and/or fix the problem forthwith. (NB: If you are a system administrator and have no idea what this message is talking about, this may indicate a serious mail system misconfiguration somewhere. Please contact ow...@bugs.debian.org immediately.) -- 833451: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=833451 Debian Bug Tracking System Contact ow...@bugs.debian.org with problems
--- Begin Message ---Source: ncbi-blast+ Version: 2.4.0-1 Severity: serious Justification: fails to build from source The Boost.Test wrapper that many of ncbi-blast+'s unit tests use turns out to be incompatible with Boost 1.61, which was just uploaded and designated the new default. (The wrapper relies on Boost.Test implementation details, which have generally been under flux lately.) I will prepare a fix upstream when I get a chance. Meanwhile, it should be possible to work around the problem by temporarily replacing the build dependency on libboost-test-dev with libboost-test1.58-dev or even libboost-test1.60-dev. A more drastic approach would be configuring --without-boost altogether, which won't affect the installed executables, just the unit tests.
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--- Begin Message ---Source: ncbi-blast+ Source-Version: 2.4.0-2 We believe that the bug you reported is fixed in the latest version of ncbi-blast+, which is due to be installed in the Debian FTP archive. A summary of the changes between this version and the previous one is attached. Thank you for reporting the bug, which will now be closed. If you have further comments please address them to 833...@bugs.debian.org, and the maintainer will reopen the bug report if appropriate. Debian distribution maintenance software pp. Aaron M. Ucko <u...@debian.org> (supplier of updated ncbi-blast+ package) (This message was generated automatically at their request; if you believe that there is a problem with it please contact the archive administrators by mailing ftpmas...@ftp-master.debian.org) -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 1.8 Date: Thu, 04 Aug 2016 23:08:20 -0400 Source: ncbi-blast+ Binary: ncbi-blast+ ncbi-blast+-legacy Architecture: source amd64 all Version: 2.4.0-2 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team <debian-med-packag...@lists.alioth.debian.org> Changed-By: Aaron M. Ucko <u...@debian.org> Description: ncbi-blast+ - next generation suite of BLAST sequence search tools ncbi-blast+-legacy - NCBI Blast legacy call script Closes: 833451 Changes: ncbi-blast+ (2.4.0-2) unstable; urgency=medium . * Import upstream patch for remaining Boost compatibility issues as debian/patches/support_recent_boost. (Closes: #833451.) * debian/rules: Automatically determine which libraries are needed. (The hand-maintained blacklist was incomplete.) Checksums-Sha1: ac04e2a0b1db842d23f5b9c61c52a18903a9162e 2226 ncbi-blast+_2.4.0-2.dsc 98dfc8dbcd3027a1c1c7e2e484bf87556e5fd2f5 28208 ncbi-blast+_2.4.0-2.debian.tar.xz 4c1756823fd37a2a9f1100a60ed655a4e5e9a9b9 1108490 ncbi-blast+-dbgsym_2.4.0-2_amd64.deb 5180f3d2c91ad4cf004ae5a1fd8c33b347881214 8640 ncbi-blast+-legacy_2.4.0-2_all.deb 774620ccba617f84b8e8dac4597af77a33816134 9115334 ncbi-blast+_2.4.0-2_amd64.deb Checksums-Sha256: a63c40411f19a0cb2e00bf1cecc19ab6876da29d8eab7b8ac307388a8acbb99d 2226 ncbi-blast+_2.4.0-2.dsc bddf17587cae87468901a7e924307461a34bed5eb1da4372e9ec7b961450a876 28208 ncbi-blast+_2.4.0-2.debian.tar.xz eed1409d9451aa1788911fb09868fabc3fa404646a68ca93a55651c815897e94 1108490 ncbi-blast+-dbgsym_2.4.0-2_amd64.deb e6a727b7eeebd8d5a6233c0c565ffff44b57d9904ee597a3ec1fc21142fdd043 8640 ncbi-blast+-legacy_2.4.0-2_all.deb 89435d0dfe7c9c876195a07773334fa1193e2a257ed156f3defc121c3ae79f91 9115334 ncbi-blast+_2.4.0-2_amd64.deb Files: c8af5b4fcd0ca402ce8beadb04577779 2226 science optional ncbi-blast+_2.4.0-2.dsc dc5b1c496377e2ae1c5e706d083c2ba8 28208 science optional ncbi-blast+_2.4.0-2.debian.tar.xz cf8aefa715d386127b273f26cf6eaa34 1108490 debug extra ncbi-blast+-dbgsym_2.4.0-2_amd64.deb 467757b49d8a63196bc81f41fc8615d1 8640 science optional ncbi-blast+-legacy_2.4.0-2_all.deb 8baa9beedc874d451c5238118e449a9b 9115334 science optional ncbi-blast+_2.4.0-2_amd64.deb -----BEGIN PGP SIGNATURE----- Version: GnuPG v1 iQIcBAEBCAAGBQJXpAYOAAoJEB5wkbHxSmSiqDkQAI21gidgk79nMBuHKjSVn1yD Z2nxphWdi2BfmTHQ9EeGHc1JvdRww+Lfs2qrXyiH3QNKM+aDHdEX+FqDBSc00CCr 2JEAezeQFaTovZk0COm/5WrdzU7IcG7C61+pRqgxuljxRyEYh3s1Mos+Idtd5LCU K27EwmucohwOD+P2LvLuyRSauwpajfh0rtssPXtR3RRYonlmAONDb5MTnvWFCVCB iLf2VKAaglgRT+S6q/z3+nvnmuC2T+G6z+sdvRUX51KCRyfM3fBWQLM0Ust/eHUa DUK/p95p94e9jUzh/sqcE1ATftI6ACnBNowgz/vTA6V59iPI6BF2deFqp85LpnEb ynLY92vqCObJCh5fXX1/Y4Z5aEy6iIbzpX+qXUh6qoEYckLnkGYraPAKmZjVngAO Q76lc95PLaefTqn8p7AqndeBH22QdelVW4EGa31DuUEFyS+12GHJmRowyOEv5mjS lEheZQrlH7qdG5zRCqQXM3tjNhCwl1UHfKhIHcD5lAbIktrOG0KlksRrWd0pGZjF sIO4/h2rDVo0YIfXmGMxBd2izHsFOyScyj+A3MDrTH4YoAvk8WDLTrhi+LR6g+cn EbrSr0S7VlSi7ZYfdagfto9X40oF27X2/kGD/V/QZWxFuubl3gcyWmGE+QA4C2A/ 2Eyrs06XP3WE9vUYasVo =sUSK -----END PGP SIGNATURE-----
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