Your message dated Tue, 02 Aug 2016 22:17:13 +0000 with message-id <e1buhzt-0007e0...@franck.debian.org> and subject line Bug#811841: fixed in seqan 1.4.2+dfsg-1 has caused the Debian Bug report #811841, regarding seqan: FTBFS with GCC 6: no match for to be marked as done.
This means that you claim that the problem has been dealt with. If this is not the case it is now your responsibility to reopen the Bug report if necessary, and/or fix the problem forthwith. (NB: If you are a system administrator and have no idea what this message is talking about, this may indicate a serious mail system misconfiguration somewhere. Please contact ow...@bugs.debian.org immediately.) -- 811841: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=811841 Debian Bug Tracking System Contact ow...@bugs.debian.org with problems
--- Begin Message ---Package: seqan Version: 1.4.1+dfsg-2 Severity: important User: debian-...@lists.debian.org Usertags: ftbfs-gcc-6 gcc-6-no-match This package fails to build with GCC 6. GCC 6 has not been released yet, but it's expected that GCC 6 will become the default compiler for stretch. Note that only the first error is reported; there might be more. You can find a snapshot of GCC 6 in experimental. To build with GCC 6, you can set CC=gcc-6 CXX=g++-6 explicitly. You may be able to find out more about this issue at https://gcc.gnu.org/gcc-6/changes.html > sbuild (Debian sbuild) 0.67.0 (26 Dec 2015) on dl580gen9-02.hlinux ... > /<<BUILDDIR>>/seqan-1.4.1+dfsg/core/include/seqan/basic/debug_test_system.h: > In instantiation of 'bool seqan::ClassTest::testTrue(const char*, int, const > T&, const char*, const char*, ...) [with T = std::basic_ifstream<char>]': > /<<BUILDDIR>>/seqan-1.4.1+dfsg/core/include/seqan/basic/debug_test_system.h:1410:20: > required from 'bool seqan::ClassTest::testTrue(const char*, int, const T&, > const char*) [with T = std::basic_ifstream<char>]' > /<<BUILDDIR>>/seqan-1.4.1+dfsg/core/tests/store/test_store_io.h:435:9: > required from 'void SEQAN_TEST_test_store_io_sam() [with bool > speed_up_dummy_to_prevent_compilation_of_unused_tests_ = true]' > /<<BUILDDIR>>/seqan-1.4.1+dfsg/core/tests/store/test_store.cpp:60:5: > required from here > /<<BUILDDIR>>/seqan-1.4.1+dfsg/core/include/seqan/basic/debug_test_system.h:1362:64: > error: no match for 'operator<<' (operand types are > 'std::basic_ostream<char>' and 'const std::basic_ifstream<char>') > std::cerr << file << ":" << line << " Assertion failed : " > ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ > << expression_ << " should be true but was " << (value_); > ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ >
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--- Begin Message ---Source: seqan Source-Version: 1.4.2+dfsg-1 We believe that the bug you reported is fixed in the latest version of seqan, which is due to be installed in the Debian FTP archive. A summary of the changes between this version and the previous one is attached. Thank you for reporting the bug, which will now be closed. If you have further comments please address them to 811...@bugs.debian.org, and the maintainer will reopen the bug report if appropriate. Debian distribution maintenance software pp. Andreas Tille <ti...@debian.org> (supplier of updated seqan package) (This message was generated automatically at their request; if you believe that there is a problem with it please contact the archive administrators by mailing ftpmas...@ftp-master.debian.org) -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 1.8 Date: Tue, 02 Aug 2016 15:58:06 +0200 Source: seqan Binary: seqan-dev Architecture: source all Version: 1.4.2+dfsg-1 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team <debian-med-packag...@lists.alioth.debian.org> Changed-By: Andreas Tille <ti...@debian.org> Description: seqan-dev - C++ library for the analysis of biological sequences (development Closes: 766741 809058 811841 816988 818088 Changes: seqan (1.4.2+dfsg-1) unstable; urgency=medium . [Andreas Tille] * New upstream version Closes: #766741 * Moved packaging to Git * Adapt watch file to fetch only seqan 1.x series * Update list of uploaders * Add compression option to watch file * Remove extras and core/apps from upstream source since these will be taken from seqan2 series (when doing so remove other unneeded stuff and binary files) * Add README.source to explain removals * Moved debian/upstream to debian/upstream/metadata * Drop documentation since developers should rather use seqan2 Closes: #816988, #809058 * Install cmake files Closes: #818088 . [Gert Wollny] * d/rules: Add -DNDEBUG to CXXFLAGS, Closes: #811841 * d/rules: enable parallel build Checksums-Sha1: cf0f703821f42a32a85aebb93744cd71d7d57e90 2059 seqan_1.4.2+dfsg-1.dsc 15b1150582ecbba675dec35793986a15d2c5c32b 9175900 seqan_1.4.2+dfsg.orig.tar.xz d9048975034c2c60a88b7898787b24b114e0deae 7148 seqan_1.4.2+dfsg-1.debian.tar.xz 23c8bd11065c9eaea312d2ce753a2036f298c848 1097160 seqan-dev_1.4.2+dfsg-1_all.deb Checksums-Sha256: 3804c52a674ddfb499e4dd298c674531a7cabf093c64a9ef99e9e5930400e6f4 2059 seqan_1.4.2+dfsg-1.dsc ec6ce16748b4eefac79e9e72d3af45175ac57ce883f933a8a4873a6975f7c5e5 9175900 seqan_1.4.2+dfsg.orig.tar.xz f67a68fdd6b9e025e5388aecb9230bb374abe4d54daf83df50fa342cf0b5e5b6 7148 seqan_1.4.2+dfsg-1.debian.tar.xz 053be6ca2b664f1b68293e4ad67f00199469c7a315cdd4300a10ed025dbda830 1097160 seqan-dev_1.4.2+dfsg-1_all.deb Files: 95db084da2056c90b1412b04fdf9d0f3 2059 science optional seqan_1.4.2+dfsg-1.dsc 57c743c6d788509e3e19cd9b75ae38b9 9175900 science optional seqan_1.4.2+dfsg.orig.tar.xz 72bda9f7a4ecd4e21f95e693bfffc4f2 7148 science optional seqan_1.4.2+dfsg-1.debian.tar.xz 052c3ff94fd682373ec1092b2a24231e 1097160 libdevel optional seqan-dev_1.4.2+dfsg-1_all.deb -----BEGIN PGP SIGNATURE----- Version: GnuPG v1 iQIcBAEBCgAGBQJXoRc/AAoJEFeKBJTRxkbRYGUP/0M/cDUQG0/8PvDu1wmi+exA +mK5bxzRcjs5qiZqZ1q7ss+eAfGfGBhIW277nfzZqqSYNSd22PC5PhdLaYZORBYR Q9ytVnTazApAmooMheKexPExdpVk2tMBbpVp586TnfaRCSnbptfy91MTyl7Vk8fL q/CvE+ZOuzN2f2fCLpp//ClYa27qAfQnbLtzKEpb3F+no0A0V8hWNloOi3B/MtyK V9U27PjHJkVZjMxc9eq0ZSqm2EulGkqFw+1t8MGERTA8VO7k5t6vjMibEp0N4qdw 2Lx6ZK+Tr0VkLo6JD09e9UIHHy1Tks2nkFU04NwW3NresmqbzVZgrSiHYB5lxyiG ngf0x/LgcKXak8UiQpkZGpfa1f8eV07duDfG+kQikf0j17rtqOYaWz8gh9X9qVCt T6ZA9LuzufGb6myZDQ81qX6yzUP50pfu2xOnJszRO60D+DhIdgmNsqUcz6Njjbx8 ZxD2DUsxTDkiH1N/xff+C/gcanwSTLSFbqkPEvAcfYZV4ibDLVQKqaMfVfpbSwxx LiqqAwngaWlETjHF9IxPGqGZ2vuVc1fIeyNbZ3FU9NBIZiAv6EUY5jYP61XxboAL kNCflm/tr3h3aBFfOn/8u1444naUpUUo5uNZj/chxjuSAcr0k+p72UtTfTcjjnD1 VjdWY5WpVtfVHhfQjvFN =JRyA -----END PGP SIGNATURE-----
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