Your message dated Sat, 16 Jul 2016 22:10:37 +0000
with message-id <e1boxnb-00030h...@franck.debian.org>
and subject line Bug#831220: fixed in pbgenomicconsensus 2.0.0+20160420-2
has caused the Debian Bug report #831220,
regarding pbgenomicconsensus: /usr/bin/poa already used by the poa package
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)
--
831220: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=831220
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Package: pbgenomicconsensus
Version: 2.0.0+20160420-1
Severity: serious
User: debian...@lists.debian.org
Usertags: piuparts
Hi,
during a test with piuparts I noticed your package fails to upgrade from
'testing'.
It installed fine in 'testing', then the upgrade to 'sid' fails
because it tries to overwrite other packages files.
This is a serious bug as it makes installation fail, and violates
sections 7.6.1 and 10.1 of the policy. An optimal solution would
consist in only one of the packages installing that file, and renaming
or removing the file in the other package. Depending on the
circumstances you might also consider Replace relations or file
diversions. If the conflicting situation cannot be resolved then, as a
last resort, the two packages have to declare a mutual
Conflict. Please take into account that Replaces, Conflicts and
diversions should only be used when packages provide different
implementations for the same functionality.
>From the attached log (scroll to the bottom...):
cheers,
Andreas
poa=2.0+20060928-4_pbgenomicconsensus=2.0.0+20160420-1.log.gz
Description: application/gzip
--- End Message ---
--- Begin Message ---
Source: pbgenomicconsensus
Source-Version: 2.0.0+20160420-2
We believe that the bug you reported is fixed in the latest version of
pbgenomicconsensus, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 831...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Afif Elghraoui <a...@debian.org> (supplier of updated pbgenomicconsensus
package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256
Format: 1.8
Date: Sat, 16 Jul 2016 12:55:32 -0700
Source: pbgenomicconsensus
Binary: pbgenomicconsensus python-pbgenomicconsensus
Architecture: source
Version: 2.0.0+20160420-2
Distribution: unstable
Urgency: low
Maintainer: Debian Med Packaging Team
<debian-med-packag...@lists.alioth.debian.org>
Changed-By: Afif Elghraoui <a...@debian.org>
Description:
pbgenomicconsensus - Pacific Biosciences variant and consensus caller
python-pbgenomicconsensus - Pacific Biosciences variant and consensus caller
(Python 2)
Closes: 831220
Changes:
pbgenomicconsensus (2.0.0+20160420-2) unstable; urgency=low
.
* Remove convenience script for poa (Closes: #831220)
Checksums-Sha1:
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pbgenomicconsensus_2.0.0+20160420-2.dsc
f56f9db9d00524628be564d043aa36785b04e171 16124
pbgenomicconsensus_2.0.0+20160420-2.debian.tar.xz
Checksums-Sha256:
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pbgenomicconsensus_2.0.0+20160420-2.dsc
f8e61e300dafe7254a1d68f2701eacb9cb2c8b7080eb4013317a26119e5886b5 16124
pbgenomicconsensus_2.0.0+20160420-2.debian.tar.xz
Files:
2395fa59d8411866ed554b1629d3449c 2454 science optional
pbgenomicconsensus_2.0.0+20160420-2.dsc
0cdf62ab4530b8572f03f5987164db9c 16124 science optional
pbgenomicconsensus_2.0.0+20160420-2.debian.tar.xz
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--- End Message ---
