Source: spectral-cube Version: 0.3.1-2 Severity: serious Justification: fails to build from source User: reproducible-bui...@lists.alioth.debian.org Usertags: ftbfs X-Debbugs-Cc: reproducible-bui...@lists.alioth.debian.org
Dear Maintainer,
spectral-cube fails to build from source in unstable/amd64:
[..]
**************************************************************************************
** Starting build
**
**************************************************************************************
Package: spectral-cube
Version: 0.3.1-2
Build architecture: amd64
Date: Mon, 30 May 2016 10:47:03 +0100
Hostname: 0101c74628d0
Uname: Linux 0101c74628d0 4.5.0-2-amd64 #1 SMP Debian 4.5.4-1
(2016-05-16) x86_64 GNU/Linux
/etc/timezone: Europe/London
**************************************************************************************
** Installing build dependencies
**
**************************************************************************************
dh_testdir
dh_testroot
dh_prep
dh_testdir
dh_testroot
dh_install
dh_installdocs
dh_installchangelogs
dh_compress
dh_fixperms
dh_installdeb
dh_gencontrol
dh_md5sums
dh_builddeb
dpkg-deb: building package 'spectral-cube-build-deps' in
'../spectral-cube-build-deps_0.3.1-2_all.deb'.
The package has been created.
Attention, the package has been created in the current directory,
not in ".." as indicated by the message above!
Selecting previously unselected package spectral-cube-build-deps.
(Reading database ... 23092 files and directories currently installed.)
Preparing to unpack spectral-cube-build-deps_0.3.1-2_all.deb ...
Unpacking spectral-cube-build-deps (0.3.1-2) ...
Reading package lists...
Building dependency tree...
Reading state information...
Correcting dependencies... Done
The following additional packages will be installed:
libblas-common libblas3 libcfitsio4 liberfa1 libgfortran3 liblapack3 libwcs5
python-all python-astropy python-astropy-helpers python-numpy python-py
python-pytest python-setuptools python3-all python3-astropy
python3-astropy-helpers python3-numpy python3-pkg-resources python3-py
python3-pytest python3-setuptools
Suggested packages:
libxml2-utils python-astropy-doc python-beautifulsoup python-h5py
python-matplotlib python-pandas python-scipy python-tz python-wcsaxes
python-yaml gfortran python-dev python-nose python-numpy-dbg
python-numpy-doc subversion python-pytest-xdist python-mock
python-setuptools-doc python3-astropy-doc python3-beautifulsoup python3-h5py
python3-matplotlib python3-pandas python3-scipy python3-tz python3-wcsaxes
python3-yaml python3-dev python3-nose python3-numpy-dbg
The following NEW packages will be installed:
libblas-common libblas3 libcfitsio4 liberfa1 libgfortran3 liblapack3 libwcs5
python-all python-astropy python-astropy-helpers python-numpy python-py
python-pytest python-setuptools python3-all python3-astropy
python3-astropy-helpers python3-numpy python3-pkg-resources python3-py
python3-pytest python3-setuptools
0 upgraded, 22 newly installed, 0 to remove and 0 not upgraded.
1 not fully installed or removed.
Need to get 13.9 MB of archives.
After this operation, 68.1 MB of additional disk space will be used.
Get:1 http://httpredir.debian.org/debian sid/main amd64 python-all amd64
2.7.11-1 [936 B]
Get:2 http://httpredir.debian.org/debian sid/main amd64 libgfortran3 amd64
6.1.1-4 [265 kB]
Get:3 http://httpredir.debian.org/debian sid/main amd64 libblas-common amd64
3.6.0-2 [13.5 kB]
Get:4 http://httpredir.debian.org/debian sid/main amd64 libblas3 amd64
3.6.0-2 [158 kB]
Get:5 http://httpredir.debian.org/debian sid/main amd64 liblapack3 amd64
3.6.0-2 [1949 kB]
Get:6 http://httpredir.debian.org/debian sid/main amd64 python-numpy amd64
1:1.11.0-1 [1770 kB]
Get:7 http://httpredir.debian.org/debian sid/main amd64 libcfitsio4 amd64
3.380-2 [512 kB]
Get:8 http://httpredir.debian.org/debian sid/main amd64 liberfa1 amd64
1.2.0-3 [114 kB]
Get:9 http://httpredir.debian.org/debian sid/main amd64 libwcs5 amd64 5.15-1
[263 kB]
Get:10 http://httpredir.debian.org/debian sid/main amd64 python-astropy amd64
1.1.2-1 [2958 kB]
Get:11 http://httpredir.debian.org/debian sid/main amd64
python-astropy-helpers all 1.1.2-1 [102 kB]
Get:12 http://httpredir.debian.org/debian sid/main amd64 python-py all
1.4.31-1 [81.8 kB]
Get:13 http://httpredir.debian.org/debian sid/main amd64 python-pytest all
2.9.1-1 [166 kB]
Get:14 http://httpredir.debian.org/debian sid/main amd64 python-setuptools
all 20.10.1-1 [203 kB]
Get:15 http://httpredir.debian.org/debian sid/main amd64 python3-all amd64
3.5.1-3 [936 B]
Get:16 http://httpredir.debian.org/debian sid/main amd64 python3-numpy amd64
1:1.11.0-1 [1769 kB]
Get:17 http://httpredir.debian.org/debian sid/main amd64 python3-astropy
amd64 1.1.2-1 [2945 kB]
Get:18 http://httpredir.debian.org/debian sid/main amd64
python3-astropy-helpers all 1.1.2-1 [102 kB]
Get:19 http://httpredir.debian.org/debian sid/main amd64
python3-pkg-resources all 20.10.1-1 [112 kB]
Get:20 http://httpredir.debian.org/debian sid/main amd64 python3-py all
1.4.31-1 [81.9 kB]
Get:21 http://httpredir.debian.org/debian sid/main amd64 python3-pytest all
2.9.1-1 [166 kB]
Get:22 http://httpredir.debian.org/debian sid/main amd64 python3-setuptools
all 20.10.1-1 [122 kB]
Fetched 13.9 MB in 0s (56.8 MB/s)
Selecting previously unselected package python-all.
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(Reading database ... 23096 files and directories currently installed.)
Preparing to unpack .../python-all_2.7.11-1_amd64.deb ...
Unpacking python-all (2.7.11-1) ...
Selecting previously unselected package libgfortran3:amd64.
Preparing to unpack .../libgfortran3_6.1.1-4_amd64.deb ...
Unpacking libgfortran3:amd64 (6.1.1-4) ...
Selecting previously unselected package libblas-common.
Preparing to unpack .../libblas-common_3.6.0-2_amd64.deb ...
Unpacking libblas-common (3.6.0-2) ...
Selecting previously unselected package libblas3.
Preparing to unpack .../libblas3_3.6.0-2_amd64.deb ...
Unpacking libblas3 (3.6.0-2) ...
Selecting previously unselected package liblapack3.
Preparing to unpack .../liblapack3_3.6.0-2_amd64.deb ...
Unpacking liblapack3 (3.6.0-2) ...
Selecting previously unselected package python-numpy.
Preparing to unpack .../python-numpy_1%3a1.11.0-1_amd64.deb ...
Unpacking python-numpy (1:1.11.0-1) ...
Selecting previously unselected package libcfitsio4:amd64.
Preparing to unpack .../libcfitsio4_3.380-2_amd64.deb ...
Unpacking libcfitsio4:amd64 (3.380-2) ...
Selecting previously unselected package liberfa1:amd64.
Preparing to unpack .../liberfa1_1.2.0-3_amd64.deb ...
Unpacking liberfa1:amd64 (1.2.0-3) ...
Selecting previously unselected package libwcs5:amd64.
Preparing to unpack .../libwcs5_5.15-1_amd64.deb ...
Unpacking libwcs5:amd64 (5.15-1) ...
Selecting previously unselected package python-astropy.
Preparing to unpack .../python-astropy_1.1.2-1_amd64.deb ...
Unpacking python-astropy (1.1.2-1) ...
Selecting previously unselected package python-astropy-helpers.
Preparing to unpack .../python-astropy-helpers_1.1.2-1_all.deb ...
Unpacking python-astropy-helpers (1.1.2-1) ...
Selecting previously unselected package python-py.
Preparing to unpack .../python-py_1.4.31-1_all.deb ...
Unpacking python-py (1.4.31-1) ...
Selecting previously unselected package python-pytest.
Preparing to unpack .../python-pytest_2.9.1-1_all.deb ...
Unpacking python-pytest (2.9.1-1) ...
Selecting previously unselected package python-setuptools.
Preparing to unpack .../python-setuptools_20.10.1-1_all.deb ...
Unpacking python-setuptools (20.10.1-1) ...
Selecting previously unselected package python3-all.
Preparing to unpack .../python3-all_3.5.1-3_amd64.deb ...
Unpacking python3-all (3.5.1-3) ...
Selecting previously unselected package python3-numpy.
Preparing to unpack .../python3-numpy_1%3a1.11.0-1_amd64.deb ...
Unpacking python3-numpy (1:1.11.0-1) ...
Selecting previously unselected package python3-astropy.
Preparing to unpack .../python3-astropy_1.1.2-1_amd64.deb ...
Unpacking python3-astropy (1.1.2-1) ...
Selecting previously unselected package python3-astropy-helpers.
Preparing to unpack .../python3-astropy-helpers_1.1.2-1_all.deb ...
Unpacking python3-astropy-helpers (1.1.2-1) ...
Selecting previously unselected package python3-pkg-resources.
Preparing to unpack .../python3-pkg-resources_20.10.1-1_all.deb ...
Unpacking python3-pkg-resources (20.10.1-1) ...
Selecting previously unselected package python3-py.
Preparing to unpack .../python3-py_1.4.31-1_all.deb ...
Unpacking python3-py (1.4.31-1) ...
Selecting previously unselected package python3-pytest.
Preparing to unpack .../python3-pytest_2.9.1-1_all.deb ...
Unpacking python3-pytest (2.9.1-1) ...
Selecting previously unselected package python3-setuptools.
Preparing to unpack .../python3-setuptools_20.10.1-1_all.deb ...
Unpacking python3-setuptools (20.10.1-1) ...
Processing triggers for libc-bin (2.22-9) ...
Processing triggers for man-db (2.7.5-1) ...
Setting up python-all (2.7.11-1) ...
Setting up libgfortran3:amd64 (6.1.1-4) ...
Setting up libblas-common (3.6.0-2) ...
Setting up libblas3 (3.6.0-2) ...
update-alternatives: using /usr/lib/libblas/libblas.so.3 to provide
/usr/lib/libblas.so.3 (libblas.so.3) in auto mode
Setting up liblapack3 (3.6.0-2) ...
update-alternatives: using /usr/lib/lapack/liblapack.so.3 to provide
/usr/lib/liblapack.so.3 (liblapack.so.3) in auto mode
Setting up python-numpy (1:1.11.0-1) ...
Setting up libcfitsio4:amd64 (3.380-2) ...
Setting up liberfa1:amd64 (1.2.0-3) ...
Setting up libwcs5:amd64 (5.15-1) ...
Setting up python-astropy (1.1.2-1) ...
Setting up python-astropy-helpers (1.1.2-1) ...
Setting up python-py (1.4.31-1) ...
Setting up python-pytest (2.9.1-1) ...
Setting up python-setuptools (20.10.1-1) ...
Setting up python3-all (3.5.1-3) ...
Setting up python3-numpy (1:1.11.0-1) ...
Setting up python3-astropy (1.1.2-1) ...
Setting up python3-astropy-helpers (1.1.2-1) ...
Setting up python3-pkg-resources (20.10.1-1) ...
Setting up python3-py (1.4.31-1) ...
Setting up python3-pytest (2.9.1-1) ...
Setting up python3-setuptools (20.10.1-1) ...
Setting up spectral-cube-build-deps (0.3.1-2) ...
Processing triggers for libc-bin (2.22-9) ...
**************************************************************************************
** Environment
**
**************************************************************************************
PATH=/home/lamby/git/projects/dotfiles/dotfiles/..//bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
HOSTNAME=0101c74628d0
TERM=xterm
EVAL=db spectral-cube; ret="${?}"; if [ "${ret}" = 29 ]; then ft . 300; echo
spectral-cube >> /tmp/tmp.Fn2I940lrJ; fi; echo spectral-cube >>
/home/lamby/unfiled/get-ftbfs-logs/.unreproducible; exit ${ret}
PAGER=more
DISPLAY=:0
DOCKER_IMAGE=lamby-debian-sid
DEB_BUILD_OPTIONS=parallel=9
PIP_DOWNLOAD_CACHE=/home/lamby/.cache/pip
HOME=/home/lamby
LOGNAME=lamby
SHLVL=1
PWD=/home/lamby/temp/cdt.20160530104701.enNYKPb61c.spectral-cube/spectral-cube-0.3.1
OLDPWD=/home/lamby/temp/cdt.20160530104701.enNYKPb61c.spectral-cube
GPG_TTY=/dev/console
QUILT_PATCHES=debian/patches
QUILT_NO_DIFF_INDEX=1
QUILT_REFRESH_ARGS=-p ab --no-timestamps --no-index
DEBEMAIL=la...@debian.org
DEBFULLNAME=Chris Lamb
EDITOR=vim
LESS=-cgiFx4M
BLASTER=A220 I5 D1 H5 P330 T6
_=/usr/bin/env
**************************************************************************************
** Building spectral-cube 0.3.1-2 on amd64
**
**************************************************************************************
dpkg-buildpackage -rfakeroot -D -us -uc -b
dpkg-buildpackage: info: source package spectral-cube
dpkg-buildpackage: info: source version 0.3.1-2
dpkg-buildpackage: info: source distribution unstable
dpkg-buildpackage: info: source changed by Ole Streicher <oleb...@debian.org>
dpkg-source --before-build spectral-cube-0.3.1
dpkg-buildpackage: info: host architecture amd64
fakeroot debian/rules clean
dh clean --with python2,python3 --buildsystem=pybuild
dh_testdir -O--buildsystem=pybuild
dh_auto_clean -O--buildsystem=pybuild
I: pybuild base:184: python2.7 setup.py clean
/usr/lib/python2.7/dist-packages/astropy_helpers/setup_helpers.py:102:
AstropyDeprecationWarning: Direct use of the adjust_compiler function in
setup.py is deprecated and can be removed from your setup.py. This
functionality is now incorporated directly into the build_ext command.
'command.', AstropyDeprecationWarning)
running clean
removing
'/home/lamby/temp/cdt.20160530104701.enNYKPb61c.spectral-cube/spectral-cube-0.3.1/.pybuild/pythonX.Y_2.7/build'
(and everything under it)
'build/bdist.linux-x86_64' does not exist -- can't clean it
'build/scripts-2.7' does not exist -- can't clean it
I: pybuild base:184: python3.5 setup.py clean
Traceback (most recent call last):
File "setup.py", line 25, in <module>
conf = config.ConfigParser()
AttributeError: module 'distutils.config' has no attribute 'ConfigParser'
E: pybuild pybuild:274: clean: plugin distutils failed with: exit code=1:
python3.5 setup.py clean
dh_auto_clean: pybuild --clean --test-pytest -i python{version} -p 3.5 --dir
. returned exit code 13
debian/rules:10: recipe for target 'clean' failed
make: *** [clean] Error 25
[..]
The full build log is attached.
Regards,
--
,''`.
: :' : Chris Lamb
`. `'` la...@debian.org / chris-lamb.co.uk
`-
spectral-cube.0.3.1-2.unstable.amd64.log.txt.gz
Description: Binary data
