Your message dated Fri, 05 Feb 2016 09:49:38 +0000
with message-id <e1ard1g-0004cc...@franck.debian.org>
and subject line Bug#813724: fixed in adios 1.9.0-7
has caused the Debian Bug report #813724,
regarding adios: FTBFS with openmpi 1.10
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)
--
813724: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=813724
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: adios
Version: 1.9.0-6
Severity: serious
Justification: fails to build from source (but built successfully in the past)
Control: block 813128 by -1
Dear maintainer,
your package FTBFSed on the buildds while being rebuild for the
libopenmpi 1.10 transition.
See https://buildd.debian.org/status/logs.php?pkg=adios&ver=1.9.0-6%2Bb2
From what I can guess, I see there is a -lmpi_f77 which afaik is not
present anymore. You should probably switch from hardcoding those flags
to using pkg-config.
failing part:
debian/rules override_dh_auto_configure
make[1]: Entering directory '/«PKGBUILDDIR»'
dh_auto_configure -- --with-ibverbs=/usr --enable-shared \
--with-hdf5-incdir=/usr/include/hdf5/serial \
--with-hdf5-libdir=/usr/lib/x86_64-linux-gnu/hdf5/serial \
--with-phdf5-incdir=/usr/include/hdf5/openmpi \
--with-phdf5-libdir=/usr/lib/x86_64-linux-gnu/hdf5/openmpi \
--with-bzip2=/usr --with-zlib=/usr --with-glib=/usr \
--prefix=/usr MPICC=mpicc.openmpi MPIFC=mpif90.openmpi CFLAGS='-g -O2
-fstack-protector-strong -Wformat -Werror=format-security
-I/usr/lib/x86_64-linux-gnu/glib-2.0/include' \
LIBS=' -L/usr/lib/openmpi/lib -L/usr//lib -lmpi_f90 -lmpi_f77 -lmpi
-lpthread'
./configure --build=x86_64-linux-gnu --prefix=/usr
--includedir=\${prefix}/include --mandir=\${prefix}/share/man
--infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var
--disable-silent-rules --libdir=\${prefix}/lib/x86_64-linux-gnu
--libexecdir=\${prefix}/lib/x86_64-linux-gnu --disable-maintainer-mode
--disable-dependency-tracking --with-ibverbs=/usr --enable-shared
--with-hdf5-incdir=/usr/include/hdf5/serial
--with-hdf5-libdir=/usr/lib/x86_64-linux-gnu/hdf5/serial
--with-phdf5-incdir=/usr/include/hdf5/openmpi
--with-phdf5-libdir=/usr/lib/x86_64-linux-gnu/hdf5/openmpi --with-bzip2=/usr
--with-zlib=/usr --with-glib=/usr --prefix=/usr MPICC=mpicc.openmpi
MPIFC=mpif90.openmpi "CFLAGS=-g -O2 -fstack-protector-strong -Wformat
-Werror=format-security -I/usr/lib/x86_64-linux-gnu/glib-2.0/include" "LIBS=
-L/usr/lib/openmpi/lib -L/usr//lib -lmpi_f90 -lmpi_f77 -lmpi -lpthread"
configure: WARNING: unrecognized options: --with-ibverbs
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... /bin/mkdir -p
checking for gawk... no
checking for mawk... mawk
checking whether make sets $(MAKE)... yes
checking whether make supports nested variables... yes
checking whether to enable maintainer-specific portions of Makefiles... no
checking for style of include used by make... GNU
checking for gcc... gcc
checking whether the C compiler works... no
configure: error: in `/«PKGBUILDDIR»':
configure: error: C compiler cannot create executables
--
regards,
Mattia Rizzolo
GPG Key: 66AE 2B4A FCCF 3F52 DA18 4D18 4B04 3FCD B944 4540 .''`.
more about me: http://mapreri.org : :' :
Launchpad user: https://launchpad.net/~mapreri `. `'`
Debian QA page: https://qa.debian.org/developer.php?login=mattia `-
signature.asc
Description: PGP signature
--- End Message ---
--- Begin Message ---
Source: adios
Source-Version: 1.9.0-7
We believe that the bug you reported is fixed in the latest version of
adios, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 813...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Alastair McKinstry <mckins...@debian.org> (supplier of updated adios package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256
Format: 1.8
Date: Thu, 04 Feb 2016 22:11:07 +0000
Source: adios
Binary: libadios-dev libadios-bin python-adios python3-adios
Architecture: source amd64
Version: 1.9.0-7
Distribution: sid
Urgency: medium
Maintainer: Alastair McKinstry <mckins...@debian.org>
Changed-By: Alastair McKinstry <mckins...@debian.org>
Description:
libadios-bin - ADIOS Adaptable IO system for simulations - binaries
libadios-dev - ADIOS Adaptable IO system for simulations
python-adios - Python interface to the ADIOS IO system
python3-adios - Python3 interface to the ADIOS IO system
Closes: 813724
Changes:
adios (1.9.0-7) unstable; urgency=medium
.
* Fix for openmpi1.10 transition. Closes: #813724.
* Move to Standards-Version: 3.9.7
* Add lintian overrides for false-alerts on tmpl scripts
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36b43d68046b12ba675881b62aaf72e0816bbd0f 2074194
libadios-bin-dbgsym_1.9.0-7_amd64.deb
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Checksums-Sha256:
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Files:
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46a023aa86623232aa44056e3aa6c3df 36564 science optional
adios_1.9.0-7.debian.tar.xz
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libadios-bin-dbgsym_1.9.0-7_amd64.deb
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libadios-bin_1.9.0-7_amd64.deb
33b60d6d64a6cbde26295b3b273c6ea2 33054016 libdevel optional
libadios-dev_1.9.0-7_amd64.deb
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python-adios-dbgsym_1.9.0-7_amd64.deb
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python3-adios-dbgsym_1.9.0-7_amd64.deb
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