Your message dated Sun, 22 Nov 2015 18:25:56 +0100
with message-id <20151122172555.gh28...@raptor.chemicalconnection.dyndns.org>
and subject line Re: [Debichem-devel] Bug#777822: cp2k: ftbfs with GCC-5
has caused the Debian Bug report #777822,
regarding cp2k: ftbfs with GCC-5
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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--
777822: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=777822
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Package: src:cp2k
Version: 2.5.1-3
Severity: normal
Tags: sid stretch
User: debian-...@lists.debian.org
Usertags: ftbfs-gcc-5
Please keep this issue open in the bug tracker for the package it
was filed for. If a fix in another package is required, please
file a bug for the other package (or clone), and add a block in this
package. Please keep the issue open until the package can be built in
a follow-up test rebuild.
The package fails to build in a test rebuild on at least amd64 with
gcc-5/g++-5, but succeeds to build with gcc-4.9/g++-4.9. The
severity of this report may be raised before the stretch release.
The full build log can be found at:
http://people.debian.org/~doko/logs/gcc5-20150205/cp2k_2.5.1-3_unstable_gcc5.log
The last lines of the build log are at the end of this report.
To build with GCC 5, either set CC=gcc-5 CXX=g++-5 explicitly,
or install the gcc, g++, gfortran, ... packages from experimental.
apt-get -t experimental install g++
Common build failures are C11 as the default C mode, new warnings
resulting in build failures with -Werror turned on, or new/dropped
symbols in Debian symbols files. For other C/C++ related build failures
see the porting guide at http://gcc.gnu.org/gcc-5/porting_to.html
[...]
Warning: Unused dummy argument 'error' at (1) [-Wunused-dummy-argument]
/«PKGBUILDDIR»/makefiles/../src/ri_environment_types.F:152:98:
gemdiag_integral_storage, screening, xfraction,
eps_opt, max_iter, error )
1
Warning: Unused dummy argument 'error' at (1) [-Wunused-dummy-argument]
mpif90 -c -g -Wall -O2 -ffast-math -funroll-loops -ftree-vectorize -ffree-form
-ffree-line-length-none -D__GFORTRAN -D__FFTSG -D__FFTW3 -D__LIBINT -D__LIBXC2
-D__parallel -D__BLACS -D__SCALAPACK -D__ELPA -I/usr/include/elpa/modules/
-D__COMPILE_ARCH="\"Linux-x86_64-gfortran\"" -D__COMPILE_DATE="\"Sat Feb 7
14:38:32 UTC 2015\"" -D__COMPILE_HOST="\"ip-172-31-7-62\""
-D__COMPILE_REVISION="\"svn:13632\"" -D__SHORT_FILE__="\"rel_control_types.F\""
/«PKGBUILDDIR»/makefiles/../src/rel_control_types.F
mpif90 -c -g -Wall -O2 -ffast-math -funroll-loops -ftree-vectorize -ffree-form
-ffree-line-length-none -D__GFORTRAN -D__FFTSG -D__FFTW3 -D__LIBINT -D__LIBXC2
-D__parallel -D__BLACS -D__SCALAPACK -D__ELPA -I/usr/include/elpa/modules/
-D__COMPILE_ARCH="\"Linux-x86_64-gfortran\"" -D__COMPILE_DATE="\"Sat Feb 7
14:38:32 UTC 2015\"" -D__COMPILE_HOST="\"ip-172-31-7-62\""
-D__COMPILE_REVISION="\"svn:13632\"" -D__SHORT_FILE__="\"qs_rho_types.F\""
/«PKGBUILDDIR»/makefiles/../src/qs_rho_types.F
mpif90 -c -g -Wall -O2 -ffast-math -funroll-loops -ftree-vectorize -ffree-form
-ffree-line-length-none -D__GFORTRAN -D__FFTSG -D__FFTW3 -D__LIBINT -D__LIBXC2
-D__parallel -D__BLACS -D__SCALAPACK -D__ELPA -I/usr/include/elpa/modules/
-D__COMPILE_ARCH="\"Linux-x86_64-gfortran\"" -D__COMPILE_DATE="\"Sat Feb 7
14:38:32 UTC 2015\"" -D__COMPILE_HOST="\"ip-172-31-7-62\""
-D__COMPILE_REVISION="\"svn:13632\""
-D__SHORT_FILE__="\"qs_wf_history_types.F\""
/«PKGBUILDDIR»/makefiles/../src/qs_wf_history_types.F
mpif90 -c -g -Wall -O2 -ffast-math -funroll-loops -ftree-vectorize -ffree-form
-ffree-line-length-none -D__GFORTRAN -D__FFTSG -D__FFTW3 -D__LIBINT -D__LIBXC2
-D__parallel -D__BLACS -D__SCALAPACK -D__ELPA -I/usr/include/elpa/modules/
-D__COMPILE_ARCH="\"Linux-x86_64-gfortran\"" -D__COMPILE_DATE="\"Sat Feb 7
14:38:32 UTC 2015\"" -D__COMPILE_HOST="\"ip-172-31-7-62\""
-D__COMPILE_REVISION="\"svn:13632\"" -D__SHORT_FILE__="\"qs_diis_types.F\""
/«PKGBUILDDIR»/makefiles/../src/qs_diis_types.F
mpif90 -c -g -Wall -O2 -ffast-math -funroll-loops -ftree-vectorize -ffree-form
-ffree-line-length-none -D__GFORTRAN -D__FFTSG -D__FFTW3 -D__LIBINT -D__LIBXC2
-D__parallel -D__BLACS -D__SCALAPACK -D__ELPA -I/usr/include/elpa/modules/
-D__COMPILE_ARCH="\"Linux-x86_64-gfortran\"" -D__COMPILE_DATE="\"Sat Feb 7
14:38:32 UTC 2015\"" -D__COMPILE_HOST="\"ip-172-31-7-62\""
-D__COMPILE_REVISION="\"svn:13632\""
-D__SHORT_FILE__="\"qs_block_davidson_types.F\""
/«PKGBUILDDIR»/makefiles/../src/qs_block_davidson_types.F
mpif90 -c -g -Wall -O2 -ffast-math -funroll-loops -ftree-vectorize -ffree-form
-ffree-line-length-none -D__GFORTRAN -D__FFTSG -D__FFTW3 -D__LIBINT -D__LIBXC2
-D__parallel -D__BLACS -D__SCALAPACK -D__ELPA -I/usr/include/elpa/modules/
-D__COMPILE_ARCH="\"Linux-x86_64-gfortran\"" -D__COMPILE_DATE="\"Sat Feb 7
14:38:32 UTC 2015\"" -D__COMPILE_HOST="\"ip-172-31-7-62\""
-D__COMPILE_REVISION="\"svn:13632\"" -D__SHORT_FILE__="\"qs_scf_types.F\""
/«PKGBUILDDIR»/makefiles/../src/qs_scf_types.F
mpif90 -c -g -Wall -O2 -ffast-math -funroll-loops -ftree-vectorize -ffree-form
-ffree-line-length-none -D__GFORTRAN -D__FFTSG -D__FFTW3 -D__LIBINT -D__LIBXC2
-D__parallel -D__BLACS -D__SCALAPACK -D__ELPA -I/usr/include/elpa/modules/
-D__COMPILE_ARCH="\"Linux-x86_64-gfortran\"" -D__COMPILE_DATE="\"Sat Feb 7
14:38:32 UTC 2015\"" -D__COMPILE_HOST="\"ip-172-31-7-62\""
-D__COMPILE_REVISION="\"svn:13632\"" -D__SHORT_FILE__="\"whittaker.F\""
/«PKGBUILDDIR»/makefiles/../src/whittaker.F
mpif90 -c -g -Wall -O2 -ffast-math -funroll-loops -ftree-vectorize -ffree-form
-ffree-line-length-none -D__GFORTRAN -D__FFTSG -D__FFTW3 -D__LIBINT -D__LIBXC2
-D__parallel -D__BLACS -D__SCALAPACK -D__ELPA -I/usr/include/elpa/modules/
-D__COMPILE_ARCH="\"Linux-x86_64-gfortran\"" -D__COMPILE_DATE="\"Sat Feb 7
14:38:32 UTC 2015\"" -D__COMPILE_HOST="\"ip-172-31-7-62\""
-D__COMPILE_REVISION="\"svn:13632\"" -D__SHORT_FILE__="\"qs_rho0_types.F\""
/«PKGBUILDDIR»/makefiles/../src/qs_rho0_types.F
mpif90 -c -g -Wall -O2 -ffast-math -funroll-loops -ftree-vectorize -ffree-form
-ffree-line-length-none -D__GFORTRAN -D__FFTSG -D__FFTW3 -D__LIBINT -D__LIBXC2
-D__parallel -D__BLACS -D__SCALAPACK -D__ELPA -I/usr/include/elpa/modules/
-D__COMPILE_ARCH="\"Linux-x86_64-gfortran\"" -D__COMPILE_DATE="\"Sat Feb 7
14:38:32 UTC 2015\"" -D__COMPILE_HOST="\"ip-172-31-7-62\""
-D__COMPILE_REVISION="\"svn:13632\""
-D__SHORT_FILE__="\"qs_period_efield_types.F\""
/«PKGBUILDDIR»/makefiles/../src/qs_period_efield_types.F
mpif90 -c -g -Wall -O2 -ffast-math -funroll-loops -ftree-vectorize -ffree-form
-ffree-line-length-none -D__GFORTRAN -D__FFTSG -D__FFTW3 -D__LIBINT -D__LIBXC2
-D__parallel -D__BLACS -D__SCALAPACK -D__ELPA -I/usr/include/elpa/modules/
-D__COMPILE_ARCH="\"Linux-x86_64-gfortran\"" -D__COMPILE_DATE="\"Sat Feb 7
14:38:32 UTC 2015\"" -D__COMPILE_HOST="\"ip-172-31-7-62\""
-D__COMPILE_REVISION="\"svn:13632\"" -D__SHORT_FILE__="\"sap_kind_types.F\""
/«PKGBUILDDIR»/makefiles/../src/sap_kind_types.F
mpif90 -c -g -Wall -O2 -ffast-math -funroll-loops -ftree-vectorize -ffree-form
-ffree-line-length-none -D__GFORTRAN -D__FFTSG -D__FFTW3 -D__LIBINT -D__LIBXC2
-D__parallel -D__BLACS -D__SCALAPACK -D__ELPA -I/usr/include/elpa/modules/
-D__COMPILE_ARCH="\"Linux-x86_64-gfortran\"" -D__COMPILE_DATE="\"Sat Feb 7
14:38:32 UTC 2015\"" -D__COMPILE_HOST="\"ip-172-31-7-62\""
-D__COMPILE_REVISION="\"svn:13632\"" -D__SHORT_FILE__="\"block_p_types.F\""
/«PKGBUILDDIR»/makefiles/../src/block_p_types.F
mpif90 -c -g -Wall -O2 -ffast-math -funroll-loops -ftree-vectorize -ffree-form
-ffree-line-length-none -D__GFORTRAN -D__FFTSG -D__FFTW3 -D__LIBINT -D__LIBXC2
-D__parallel -D__BLACS -D__SCALAPACK -D__ELPA -I/usr/include/elpa/modules/
-D__COMPILE_ARCH="\"Linux-x86_64-gfortran\"" -D__COMPILE_DATE="\"Sat Feb 7
14:38:32 UTC 2015\"" -D__COMPILE_HOST="\"ip-172-31-7-62\""
-D__COMPILE_REVISION="\"svn:13632\"" -D__SHORT_FILE__="\"qs_oce_types.F\""
/«PKGBUILDDIR»/makefiles/../src/qs_oce_types.F
/«PKGBUILDDIR»/makefiles/../src/qs_oce_types.F:55:43:
SUBROUTINE allocate_oce_set(oce_set,natom,nkind,ndim,error)
1
Warning: Unused dummy argument 'natom' at (1) [-Wunused-dummy-argument]
/«PKGBUILDDIR»/makefiles/../src/qs_oce_types.F:55:54:
SUBROUTINE allocate_oce_set(oce_set,natom,nkind,ndim,error)
1
Warning: Unused dummy argument 'ndim' at (1) [-Wunused-dummy-argument]
mpif90 -c -g -Wall -O2 -ffast-math -funroll-loops -ftree-vectorize -ffree-form
-ffree-line-length-none -D__GFORTRAN -D__FFTSG -D__FFTW3 -D__LIBINT -D__LIBXC2
-D__parallel -D__BLACS -D__SCALAPACK -D__ELPA -I/usr/include/elpa/modules/
-D__COMPILE_ARCH="\"Linux-x86_64-gfortran\"" -D__COMPILE_DATE="\"Sat Feb 7
14:38:32 UTC 2015\"" -D__COMPILE_HOST="\"ip-172-31-7-62\""
-D__COMPILE_REVISION="\"svn:13632\"" -D__SHORT_FILE__="\"cp_fm_diag.F\""
/«PKGBUILDDIR»/makefiles/../src/cp_fm_diag.F
/«PKGBUILDDIR»/makefiles/../src/cp_fm_diag.F:46:6:
USE ELPA1
1
Fatal Error: Cannot read module file 'elpa1.mod' opened at (1), because it was
created by a different version of GNU Fortran
compilation terminated.
make[4]: *** [cp_fm_diag.o] Error 1
/«PKGBUILDDIR»/makefiles/../makefiles/Makefile:449: recipe for target
'cp_fm_diag.o' failed
make[4]: Leaving directory '/«PKGBUILDDIR»/obj/Linux-x86_64-gfortran/popt'
make[3]: *** [build] Error 2
/«PKGBUILDDIR»/makefiles/../makefiles/Makefile:107: recipe for target 'build'
failed
make[3]: Leaving directory '/«PKGBUILDDIR»/makefiles'
make[2]: *** [all] Error 2
Makefile:141: recipe for target 'all' failed
make[2]: Leaving directory '/«PKGBUILDDIR»/makefiles'
make[1]: *** [override_dh_auto_build] Error 2
debian/rules:37: recipe for target 'override_dh_auto_build' failed
make[1]: Leaving directory '/«PKGBUILDDIR»'
make: *** [build-arch] Error 2
debian/rules:24: recipe for target 'build-arch' failed
dpkg-buildpackage: error: debian/rules build-arch gave error exit status 2
--- End Message ---
--- Begin Message ---
Hi,
On Thu, Feb 12, 2015 at 10:30:45AM +0000, Matthias Klose wrote:
> The package fails to build in a test rebuild on at least amd64 with
> gcc-5/g++-5, but succeeds to build with gcc-4.9/g++-4.9. The
> severity of this report may be raised before the stretch release.
>
> The full build log can be found at:
> http://people.debian.org/~doko/logs/gcc5-20150205/cp2k_2.5.1-3_unstable_gcc5.log
> The last lines of the build log are at the end of this report.
I've retried a build now, and it builds fine. I think the last elpa
upload made its Fortran90 module switch to the GCC5 version, so now cp2k
no longer FTBFS, so closing this.
Michael
--- End Message ---
