On 11/18/2014 06:56 AM, Andreas Tille wrote: > Hi Gregor, > > I'm in (semi)-Vac since the weekend and will go on VAC tomorrow. Feel > free to NMU (or "team" upload). It seems Olivier who is usually very > responsive has some time constraints. Hi, I gonna add the patch and upload the fix today.
Thanks for your help Olivier > > Thanks for your help > > Andreas. > > On Mon, Nov 17, 2014 at 09:12:30PM +0100, gregor herrmann wrote: >> Control: tag -1 + confirmed patch >> >> On Sun, 09 Nov 2014 08:07:04 +0100, Lucas Nussbaum wrote: >> >>> Source: biojava3-live >>> Version: 3.1.0+dfsg-1 >>> Severity: serious >>> Tags: jessie sid >>> User: debian...@lists.debian.org >>> Usertags: qa-ftbfs-20141108 qa-ftbfs >>> Justification: FTBFS in jessie on amd64 >> >>>> javadocs: >>>> [javadoc] >>>> /«BUILDDIR»/biojava3-live-3.1.0+dfsg/biojavadoc/src/main/java/org/biojava3/ontology/utils/Annotatable.java:77: >>>> error: unmappable character for encoding ASCII >>>> [javadoc] * @author Kalle N???slund (docs) >>>> [javadoc] ^ >>>> [javadoc] >>>> /«BUILDDIR»/biojava3-live-3.1.0+dfsg/biojavadoc/src/main/java/org/biojava3/ontology/utils/Annotatable.java:77: >>>> error: unmappable character for encoding ASCII >>>> [javadoc] * @author Kalle N???slund (docs) >>>> [javadoc] ^ >>>> [javadoc] >>>> /«BUILDDIR»/biojava3-live-3.1.0+dfsg/biojavadoc/src/main/java/org/biojava3/ontology/utils/Annotatable.java:77: >>>> error: unmappable character for encoding ASCII >>>> [javadoc] * @author Kalle N???slund (docs) >>>> [javadoc] ^ >> The package doesn't build in my sid chroot (because of some rdep >> glitch [0]) but I've tested the attached patch in a jessie chroot. >> >> (There are other ways to tell javadoc about the file encodings but >> that was my first try and it works.) >> >> >> >> Cheers, >> gregor >> >> >> [0] >> Errors were encountered while processing: >> icedtea-netx:amd64 >> E: Sub-process /usr/bin/dpkg returned an error code (1) >> Failed to perform requested operation on package. Trying to recover: >> Setting up icedtea-netx:amd64 (1.5.1-1) ... >> update-alternatives: warning: forcing reinstallation of alternative >> /usr/lib/jvm/java-7-openjdk-amd64/jre/bin/itweb-settings because link group >> itweb-settings is broken >> update-alternatives: warning: not replacing >> /usr/share/man/man1/itweb-settings.1.gz with a link >> update-alternatives: warning: forcing reinstallation of alternative >> /usr/lib/jvm/java-7-openjdk-amd64/jre/bin/itweb-settings because link group >> itweb-settings is broken >> update-alternatives: warning: not replacing >> /usr/share/man/man1/itweb-settings.1.gz with a link >> update-alternatives: error: alternative path >> /usr/lib/jvm/java-8-openjdk-amd64/jre/bin/javaws doesn't exist >> dpkg: error processing package icedtea-netx:amd64 (--configure): >> subprocess installed post-installation script returned error exit status 2 >> Errors were encountered while processing: >> icedtea-netx:amd64 >> >> -- >> .''`. Homepage: http://info.comodo.priv.at/ - OpenPGP key >> 0xBB3A68018649AA06 >> : :' : Debian GNU/Linux user, admin, and developer - >> http://www.debian.org/ >> `. `' Member of VIBE!AT & SPI, fellow of the Free Software Foundation >> Europe >> `- NP: The Beatles: Good Morning Good Morning >> Index: debian/build.xml >> =================================================================== >> --- debian/build.xml (revision 18487) >> +++ debian/build.xml (working copy) >> @@ -61,7 +61,7 @@ >> <target name="javadocs"> >> <mkdir dir="${docs.dir}"/> >> <mkdir dir="${docs.lib.dir}"/> >> - <javadoc destdir="${docs.lib.dir}" sourcepath="${src.dir}" >> packagenames="org.*"> >> + <javadoc destdir="${docs.lib.dir}" sourcepath="${src.dir}" >> packagenames="org.*" encoding="UTF-8"> >> <link href="http://java.sun.com/j2se/1.6.0/docs/api/"/> >> </javadoc> >> </target> >> Index: debian/changelog >> =================================================================== >> --- debian/changelog (revision 18487) >> +++ debian/changelog (working copy) >> @@ -1,3 +1,14 @@ >> +biojava3-live (3.1.0+dfsg-1.1) UNRELEASED; urgency=medium >> + >> + * Non-maintainer upload. >> + * Fix "FTBFS in jessie: dh_install: libbiojava3-java-doc missing files >> + (doc/biojava/*), aborting": >> + debian/build.xml: tell javadoc that source files are encoded as UTF-8; >> + otherwise it bails out, and dh_install finds nothing to install. >> + (Closes: #768710) >> + >> + -- gregor herrmann <gre...@debian.org> Mon, 17 Nov 2014 20:36:16 +0100 >> + >> biojava3-live (3.1.0+dfsg-1) unstable; urgency=medium >> >> * New upstream release > > > >> _______________________________________________ >> Debian-med-packaging mailing list >> debian-med-packag...@lists.alioth.debian.org >> http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-packaging > -- Olivier Sallou IRISA / University of Rennes 1 Campus de Beaulieu, 35000 RENNES - FRANCE Tel: 02.99.84.71.95 gpg key id: 4096R/326D8438 (keyring.debian.org) Key fingerprint = 5FB4 6F83 D3B9 5204 6335 D26D 78DC 68DB 326D 8438 -- To UNSUBSCRIBE, email to debian-bugs-rc-requ...@lists.debian.org with a subject of "unsubscribe". Trouble? Contact listmas...@lists.debian.org
