Your message dated Wed, 05 Nov 2014 07:04:21 +0000 with message-id <e1xludh-0008dh...@franck.debian.org> and subject line Bug#768114: fixed in hhsuite 2.0.16-4 has caused the Debian Bug report #768114, regarding hhsuite-doc: fails to upgrade from 'wheezy' - trying to overwrite /usr/share/doc-base/hhsuite to be marked as done.
This means that you claim that the problem has been dealt with. If this is not the case it is now your responsibility to reopen the Bug report if necessary, and/or fix the problem forthwith. (NB: If you are a system administrator and have no idea what this message is talking about, this may indicate a serious mail system misconfiguration somewhere. Please contact ow...@bugs.debian.org immediately.) -- 768114: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=768114 Debian Bug Tracking System Contact ow...@bugs.debian.org with problems
--- Begin Message ---Package: hhsuite-doc Version: 2.0.16-3 Severity: serious User: debian...@lists.debian.org Usertags: piuparts Hi, during a test with piuparts I noticed your package fails to upgrade from 'wheezy'. It installed fine in 'wheezy', then the upgrade to 'jessie' fails because it tries to overwrite other packages files without declaring a Breaks+Replaces relation. See policy 7.6 at http://www.debian.org/doc/debian-policy/ch-relationships.html#s-replaces >From the attached log (scroll to the bottom...): Selecting previously unselected package hhsuite-doc. Unpacking hhsuite-doc (from .../hhsuite-doc_2.0.16-3_all.deb) ... dpkg: error processing /var/cache/apt/archives/hhsuite-doc_2.0.16-3_all.deb (--unpack): trying to overwrite '/usr/share/doc-base/hhsuite', which is also in package hhsuite 2.0.15-1 dpkg-deb: error: subprocess paste was killed by signal (Broken pipe) Errors were encountered while processing: /var/cache/apt/archives/hhsuite-doc_2.0.16-3_all.deb cheers, Andreas
hhsuite=2.0.15-1_hhsuite-doc=2.0.16-3.log.gz
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--- Begin Message ---Source: hhsuite Source-Version: 2.0.16-4 We believe that the bug you reported is fixed in the latest version of hhsuite, which is due to be installed in the Debian FTP archive. A summary of the changes between this version and the previous one is attached. Thank you for reporting the bug, which will now be closed. If you have further comments please address them to 768...@bugs.debian.org, and the maintainer will reopen the bug report if appropriate. Debian distribution maintenance software pp. Andreas Tille <ti...@debian.org> (supplier of updated hhsuite package) (This message was generated automatically at their request; if you believe that there is a problem with it please contact the archive administrators by mailing ftpmas...@ftp-master.debian.org) -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 1.8 Date: Wed, 05 Nov 2014 07:21:05 +0100 Source: hhsuite Binary: hhsuite hhsuite-doc hhsuite-data hhsuite-dbg Architecture: source amd64 all Version: 2.0.16-4 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team <debian-med-packag...@lists.alioth.debian.org> Changed-By: Andreas Tille <ti...@debian.org> Description: hhsuite - sensitive protein sequence searching based on HMM-HMM alignment hhsuite-data - sensitive protein sequence searching based on HMM-HMM alignment ( hhsuite-dbg - sensitive protein sequence searching based on HMM-HMM alignment ( hhsuite-doc - documentation for HHsuite for HMM-HMM comparisons Closes: 768114 Changes: hhsuite (2.0.16-4) unstable; urgency=medium . * Add missing Breaks statement for hhsuite-doc Closes: #768114 Checksums-Sha1: 5da74a5c113dada57eebc891401083bb5e3a5f4c 2200 hhsuite_2.0.16-4.dsc d6b86ac762a306f0547b4d52d9fd16e0f2fcdc4a 9904 hhsuite_2.0.16-4.debian.tar.xz 0949d5ab29c54c56fcae935b5a7024933883c7fc 739836 hhsuite_2.0.16-4_amd64.deb 69a25211b24076d1bf13197ab4b793e2f8e822e9 329560 hhsuite-doc_2.0.16-4_all.deb a1616c75b1bea5c80393345940dca743ac9e8902 2159382 hhsuite-data_2.0.16-4_all.deb ed0cc9b8bd5b774d2b3db9c7d75df3814c21e7cd 3529018 hhsuite-dbg_2.0.16-4_amd64.deb Checksums-Sha256: 5c832573cd65c2ad82a37ff386fef996000fbe892b0647836ace457291f89e23 2200 hhsuite_2.0.16-4.dsc a3a5be5c558a59229c7a82c054bf2831ca94552c66d0ad836c97596011636ced 9904 hhsuite_2.0.16-4.debian.tar.xz 025c290849a1cbb775cdf266717adaef01e272f1a3b3cb2392fdef6ca759d5d8 739836 hhsuite_2.0.16-4_amd64.deb 443471a52411457f99895a42a97a666c025cf664037689128954c92bdd72d350 329560 hhsuite-doc_2.0.16-4_all.deb 28b79c5b755323c84dea6750c77a2ef1d1fce6ab9403f4ee1e53c4e404b56760 2159382 hhsuite-data_2.0.16-4_all.deb 56b58a1dea561821b9853129dc1e49beca64ea0ffa8a6f292c98b74ccee25cd7 3529018 hhsuite-dbg_2.0.16-4_amd64.deb Files: 44e48ac06c7b171f8368d455059ada0c 2200 science optional hhsuite_2.0.16-4.dsc f8d02a5414d89d1c135169d12ac04546 9904 science optional hhsuite_2.0.16-4.debian.tar.xz aa6a895c3a2341d31fdfb39270786e15 739836 science optional hhsuite_2.0.16-4_amd64.deb a050b9e62d20632ff04c4e2d1a961649 329560 doc optional hhsuite-doc_2.0.16-4_all.deb 929ca35627e2188d6e89c093d80f9c38 2159382 science optional hhsuite-data_2.0.16-4_all.deb a5f00fcb394808a6d429e817df5002b5 3529018 debug extra hhsuite-dbg_2.0.16-4_amd64.deb -----BEGIN PGP SIGNATURE----- Version: GnuPG v1 iQIcBAEBCAAGBQJUWcLnAAoJEFeKBJTRxkbRPHcP/RGBgyJs63xibGq5Jowzfz1y UKLqlXWDlZXRKrzmuo2V6VB61nxM/Xjm8aILUa07pIsW3uCdWdZ2TKXTY+Pq9Cpv O3HUZH5X+TQvZD04vEVzyHriRbSRM48tju4L2DMHAwj/aLTIdEGxBIkZuUhqW58R Sn32Njd4sLmnnDYzlJQ4dmAPctKboYM8emPYGSnsSJMJJDShMHqsbwr6OOOgBkCi /jUEeoi63v4KC7P3VFEl/54mYw2pQPoaXy15sDtOWIdXbXo3LF1wzSXSZAvvl4Kd 8ogZzqHwHEveOi1h/4ChCfWl5cZ5Ky/yjqisSmFom4U2c/nUhmk52FINaMBqmLSQ k1k/YI2wUudKZd1ag3kx9kf8twFJS564oHKXbjKkFFyp/7gjgNCvoA/r0cD66S3a LWf4LJgdLEewEUGpDoqycSYnCpR1t+IAwh6bB7bGTnUMAFsF1D1BTWPvjbf3uXGM PZxifTRpITG5QvV+IWmYvX7mjkF0TsBkuaXmJk7BYDjAt2UUt4NXsClpxG9sDoro W8g9441w1n2M2w1bDXAB2Zs8cbCZ3tCbGkqcXp+fx3cxltAIWjoPfnKAo6pQGQNn 9nRvTuDdszb1BD1zhvgp+htax47/C+etmqrOaDNrj5E+iYZwqpYoawUISsbDT5qO 1r6BuGf3xQlgGVn3s/lZ =q1zc -----END PGP SIGNATURE-----
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