Your message dated Fri, 05 Sep 2014 17:49:45 +0000
with message-id <e1xpxdp-00050n...@franck.debian.org>
and subject line Bug#759974: fixed in votca-csg 1.2.4-1
has caused the Debian Bug report #759974,
regarding votca-csg: FTBFS: Could NOT find GROMACS (missing: GROMACS_LIBRARY
GROMACS_INCLUDE_DIR)
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)
--
759974: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=759974
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: votca-csg
Version: 1.2.3-1
Severity: serious
Tags: jessie sid
User: debian...@lists.debian.org
Usertags: qa-ftbfs-20140830 qa-ftbfs
Justification: FTBFS on amd64
Hi,
During a rebuild of all packages in sid, your package failed to build on
amd64.
Relevant part (hopefully):
> make[1]: Entering directory '/«PKGBUILDDIR»'
> dh_auto_configure -- -DLIB=lib/x86_64-linux-gnu
> -- The C compiler identification is GNU 4.9.1
> -- The CXX compiler identification is GNU 4.9.1
> -- Check for working C compiler: /usr/bin/cc
> -- Check for working C compiler: /usr/bin/cc -- works
> -- Detecting C compiler ABI info
> -- Detecting C compiler ABI info - done
> -- Check for working CXX compiler: /usr/bin/c++
> -- Check for working CXX compiler: /usr/bin/c++ -- works
> -- Detecting CXX compiler ABI info
> -- Detecting CXX compiler ABI info - done
> -- Found TXT2TAGS: /usr/bin/txt2tags
> -- Boost version: 1.55.0
> -- Found the following Boost libraries:
> -- program_options
> CMake Warning (dev) at CMakeLists.txt:70 (find_package):
> Syntax Warning in cmake code at
>
> /«PKGBUILDDIR»/CMakeModules/FindVOTCA_TOOLS.cmake:57:497
>
> Argument not separated from preceding token by whitespace.
> This warning is for project developers. Use -Wno-dev to suppress it.
>
> -- checking for module 'libvotca_tools'
> -- package 'libvotca_tools' not found
> -- Found VOTCA_TOOLS: /usr/lib/x86_64-linux-gnu/libvotca_tools.so
> -- Looking for VotcaToolsFromC in /usr/lib/x86_64-linux-gnu/libvotca_tools.so;
> -- Looking for VotcaToolsFromC in
> /usr/lib/x86_64-linux-gnu/libvotca_tools.so; - found
> -- Looking for assert.h
> -- Looking for assert.h - found
> -- Looking for C++ include algorithm
> -- Looking for C++ include algorithm - found
> -- Looking for C++ include fstream
> -- Looking for C++ include fstream - found
> -- Looking for C++ include iomanip
> -- Looking for C++ include iomanip - found
> -- Looking for C++ include iostream
> -- Looking for C++ include iostream - found
> -- Looking for C++ include list
> -- Looking for C++ include list - found
> -- Looking for C++ include map
> -- Looking for C++ include map - found
> -- Looking for C++ include numeric
> -- Looking for C++ include numeric - found
> -- Looking for C++ include sstream
> -- Looking for C++ include sstream - found
> -- Looking for C++ include stdexcept
> -- Looking for C++ include stdexcept - found
> -- Looking for C++ include string
> -- Looking for C++ include string - found
> -- Looking for C++ include vector
> -- Looking for C++ include vector - found
> -- Looking for C++ include cstdlib
> -- Looking for C++ include cstdlib - found
> -- Looking for sqrt in m
> -- Looking for sqrt in m - found
> -- checking for module 'libgmx'
> -- package 'libgmx' not found
> -- Could NOT find GROMACS (missing: GROMACS_LIBRARY GROMACS_INCLUDE_DIR)
> CMake Error at src/libcsg/CMakeLists.txt:25 (message):
> gromacs not found, make sure you have installed at least the gromacs-4.0.7
> and it's dev package. If the gromacs module was not found above, make sure
> you have sourced GMXRC or set PKG_CONFIG_PATH yourself. If you have a
> double precision version of gromacs enable to build against it with
> -DGMX_DOUBLE=ON. If you have gromacs-5.0 installed enable to build against
> it with -DWITH_GMX_DEVEL=ON. Gromacs support can be disable it with
> -DWITH_GMX=OFF.
>
>
> -- Configuring incomplete, errors occurred!
> See also "/«PKGBUILDDIR»/obj-x86_64-linux-gnu/CMakeFiles/CMakeOutput.log".
> dh_auto_configure: cmake .. -DCMAKE_INSTALL_PREFIX=/usr
> -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_BUILD_TYPE=None
> -DLIB=lib/x86_64-linux-gnu returned exit code 1
> debian/rules:17: recipe for target 'override_dh_auto_configure' failed
> make[1]: *** [override_dh_auto_configure] Error 2
The full build log is available from:
http://aws-logs.debian.net/ftbfs-logs/2014/08/30/votca-csg_1.2.3-1_unstable.log
A list of current common problems and possible solutions is available at
http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute!
About the archive rebuild: The rebuild was done on EC2 VM instances from
Amazon Web Services, using a clean, minimal and up-to-date chroot. Every
failed build was retried once to eliminate random failures. The build
was done with DEB_BUILD_OPTIONS="parallel=4", so if your packaging tries
to support this, it might be a good idea to explore whether this might
be the cause of the failure.
--- End Message ---
--- Begin Message ---
Source: votca-csg
Source-Version: 1.2.4-1
We believe that the bug you reported is fixed in the latest version of
votca-csg, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 759...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Christoph Junghans <jungh...@votca.org> (supplier of updated votca-csg package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256
Format: 1.8
Date: Fri, 05 Sep 2014 19:06:32 +0200
Source: votca-csg
Binary: libvotca-csg2-dev libvotca-csg2 votca-csg-scripts votca-csg-tutorials
votca-csg
Architecture: source i386 all
Version: 1.2.4-1
Distribution: unstable
Urgency: medium
Maintainer: Debichem Team <debichem-de...@lists.alioth.debian.org>
Changed-By: Christoph Junghans <jungh...@votca.org>
Description:
libvotca-csg2 - VOTCA's coarse-graining library
libvotca-csg2-dev - VOTCA's coarse-graining library, development kit
votca-csg - VOTCA's coarse-graining engine
votca-csg-scripts - VOTCA's coarse-graining scripts
votca-csg-tutorials - VOTCA's coarse-graining tutorials
Closes: 759974
Changes:
votca-csg (1.2.4-1) unstable; urgency=medium
.
[ Christoph Junghans]
* version bump (Closes: #759974)
.
[ Nicholas Breen ]
* Add Vcs-Browser and Vcs-Svn fields to debian/control
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Files:
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libvotca-csg2-dev_1.2.4-1_i386.deb
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libvotca-csg2_1.2.4-1_i386.deb
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votca-csg-scripts_1.2.4-1_all.deb
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votca-csg-tutorials_1.2.4-1_all.deb
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votca-csg_1.2.4-1_i386.deb
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votca-csg_1.2.4.orig-tutorials.tar.gz
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votca-csg_1.2.4.orig.tar.gz
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votca-csg_1.2.4-1.debian.tar.xz
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--- End Message ---
