Your message dated Tue, 02 Sep 2014 16:34:22 +0000 with message-id <e1xor2e-0003of...@franck.debian.org> and subject line Bug#759978: fixed in seqan 1.4.1+dfsg-2 has caused the Debian Bug report #759978, regarding seqan: FTBFS: c++: error: unrecognized command line option '-strong' to be marked as done.
This means that you claim that the problem has been dealt with. If this is not the case it is now your responsibility to reopen the Bug report if necessary, and/or fix the problem forthwith. (NB: If you are a system administrator and have no idea what this message is talking about, this may indicate a serious mail system misconfiguration somewhere. Please contact ow...@bugs.debian.org immediately.) -- 759978: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=759978 Debian Bug Tracking System Contact ow...@bugs.debian.org with problems
--- Begin Message ---Source: seqan Version: 1.4.1+dfsg-1 Severity: serious Tags: jessie sid User: debian...@lists.debian.org Usertags: qa-ftbfs-20140830 qa-ftbfs Justification: FTBFS on amd64 Hi, During a rebuild of all packages in sid, your package failed to build on amd64. Relevant part (hopefully): > debian/rules build > dh build > dh_testdir > dh_auto_configure > mkdir -p obj-x86_64-linux-gnu > cd obj-x86_64-linux-gnu > cmake .. -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_VERBOSE_MAKEFILE=ON > -DCMAKE_BUILD_TYPE=None > -- The C compiler identification is GNU 4.9.1 > -- The CXX compiler identification is unknown > -- Check for working C compiler: /usr/bin/cc > -- Check for working C compiler: /usr/bin/cc -- works > -- Detecting C compiler ABI info > -- Detecting C compiler ABI info - done > -- Check for working CXX compiler: /usr/bin/c++ > -- Check for working CXX compiler: /usr/bin/c++ -- broken > CMake Error at /usr/share/cmake-2.8/Modules/CMakeTestCXXCompiler.cmake:54 > (message): > The C++ compiler "/usr/bin/c++" is not able to compile a simple test > program. > > It fails with the following output: > > Change Dir: > /«BUILDDIR»/seqan-1.4.1+dfsg/obj-x86_64-linux-gnu/CMakeFiles/CMakeTmp > > > > Run Build Command:/usr/bin/make "cmTryCompileExec625972386/fast" > > make[1]: Entering directory > '/«BUILDDIR»/seqan-1.4.1+dfsg/obj-x86_64-linux-gnu/CMakeFiles/CMakeTmp' > > > /usr/bin/make -f CMakeFiles/cmTryCompileExec625972386.dir/build.make > CMakeFiles/cmTryCompileExec625972386.dir/build > > make[2]: Entering directory > '/«BUILDDIR»/seqan-1.4.1+dfsg/obj-x86_64-linux-gnu/CMakeFiles/CMakeTmp' > > > /usr/bin/cmake -E cmake_progress_report > > /«BUILDDIR»/seqan-1.4.1+dfsg/obj-x86_64-linux-gnu/CMakeFiles/CMakeTmp/CMakeFiles > 1 > > Building CXX object > CMakeFiles/cmTryCompileExec625972386.dir/testCXXCompiler.cxx.o > > /usr/bin/c++ -g -O2 -strong -Wformat -Werror=format-security > -D_FORTIFY_SOURCE=2 -o > CMakeFiles/cmTryCompileExec625972386.dir/testCXXCompiler.cxx.o -c > > /«BUILDDIR»/seqan-1.4.1+dfsg/obj-x86_64-linux-gnu/CMakeFiles/CMakeTmp/testCXXCompiler.cxx > > > c++: error: unrecognized command line option '-strong' > > CMakeFiles/cmTryCompileExec625972386.dir/build.make:57: recipe for target > 'CMakeFiles/cmTryCompileExec625972386.dir/testCXXCompiler.cxx.o' failed > > make[2]: Leaving directory > '/«BUILDDIR»/seqan-1.4.1+dfsg/obj-x86_64-linux-gnu/CMakeFiles/CMakeTmp' > > > make[2]: *** > [CMakeFiles/cmTryCompileExec625972386.dir/testCXXCompiler.cxx.o] Error 1 > > Makefile:114: recipe for target 'cmTryCompileExec625972386/fast' failed > > make[1]: *** [cmTryCompileExec625972386/fast] Error 2 > > make[1]: Leaving directory > '/«BUILDDIR»/seqan-1.4.1+dfsg/obj-x86_64-linux-gnu/CMakeFiles/CMakeTmp' > > > > > > > CMake will not be able to correctly generate this project. > Call Stack (most recent call first): > CMakeLists.txt:9 (project) > > > -- Configuring incomplete, errors occurred! > See also > "/«BUILDDIR»/seqan-1.4.1+dfsg/obj-x86_64-linux-gnu/CMakeFiles/CMakeOutput.log". > See also > "/«BUILDDIR»/seqan-1.4.1+dfsg/obj-x86_64-linux-gnu/CMakeFiles/CMakeError.log". > dh_auto_configure: cmake .. -DCMAKE_INSTALL_PREFIX=/usr > -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_BUILD_TYPE=None returned exit code 1 > make: *** [build] Error 2 The full build log is available from: http://aws-logs.debian.net/ftbfs-logs/2014/08/30/seqan_1.4.1+dfsg-1_unstable.log A list of current common problems and possible solutions is available at http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute! About the archive rebuild: The rebuild was done on EC2 VM instances from Amazon Web Services, using a clean, minimal and up-to-date chroot. Every failed build was retried once to eliminate random failures. The build was done with DEB_BUILD_OPTIONS="parallel=4", so if your packaging tries to support this, it might be a good idea to explore whether this might be the cause of the failure.
--- End Message ---
--- Begin Message ---Source: seqan Source-Version: 1.4.1+dfsg-2 We believe that the bug you reported is fixed in the latest version of seqan, which is due to be installed in the Debian FTP archive. A summary of the changes between this version and the previous one is attached. Thank you for reporting the bug, which will now be closed. If you have further comments please address them to 759...@bugs.debian.org, and the maintainer will reopen the bug report if appropriate. Debian distribution maintenance software pp. Andreas Tille <ti...@debian.org> (supplier of updated seqan package) (This message was generated automatically at their request; if you believe that there is a problem with it please contact the archive administrators by mailing ftpmas...@ftp-master.debian.org) -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 1.8 Date: Mon, 01 Sep 2014 22:54:54 +0200 Source: seqan Binary: seqan-apps seqan-dev Architecture: source amd64 all Version: 1.4.1+dfsg-2 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team <debian-med-packag...@lists.alioth.debian.org> Changed-By: Andreas Tille <ti...@debian.org> Description: seqan-apps - C++ library for the analysis of biological sequences seqan-dev - C++ library for the analysis of biological sequences (development Closes: 752558 759978 Changes: seqan (1.4.1+dfsg-2) unstable; urgency=medium . * Do proper manipulation of build options (thanks for the hint to Etienne Millon <m...@emillon.org>) Closes: #759978, #752558 Checksums-Sha1: 789244a2d72da7854dcb958b21cfafce4803cfd0 2113 seqan_1.4.1+dfsg-2.dsc 46449009824f48702b5a11a8e94ef2f15cdd9a05 8508 seqan_1.4.1+dfsg-2.debian.tar.xz 52e39232469b87172297fb1302d559f401a24b71 7486764 seqan-apps_1.4.1+dfsg-2_amd64.deb 6a55875fba301946a063e8228e1f68f58a419fdd 2615626 seqan-dev_1.4.1+dfsg-2_all.deb Checksums-Sha256: fc551d0ddf15efc13742e86c73e639eed9777dc6f78e1cac5d90310859f69dff 2113 seqan_1.4.1+dfsg-2.dsc b17449b13aa56f19645bfea66ead4792857ea34fb2ba93f95f0dab59f110a629 8508 seqan_1.4.1+dfsg-2.debian.tar.xz b48f5d76669f68059d42dbce799274e9a2eb5a67276a0132e6e4450ccd82c27a 7486764 seqan-apps_1.4.1+dfsg-2_amd64.deb 1aa4cf4c56cb9283505b373bcb600aba7072cfd277840ad44b1b499e7f27a2f2 2615626 seqan-dev_1.4.1+dfsg-2_all.deb Files: 94372a1b5097557c75d74e0d1830b814 7486764 science optional seqan-apps_1.4.1+dfsg-2_amd64.deb 0bfb73b1b414bff3b672f135a4f69760 2615626 libdevel optional seqan-dev_1.4.1+dfsg-2_all.deb fe550743b64ce03381023e9ff9870e77 2113 science optional seqan_1.4.1+dfsg-2.dsc 5a1aaf26657a343075111723766d3560 8508 science optional seqan_1.4.1+dfsg-2.debian.tar.xz -----BEGIN PGP SIGNATURE----- Version: GnuPG v1 iQIcBAEBCgAGBQJUBd9XAAoJEFeKBJTRxkbRew8P/1eEw707CoJXyqgq8FW/rYVq luBDmw2EgXBqXBEi3GUJNXCtBI0/mUYh98WzKGN72oNawwntp5W+bUw8XMt1AYFh osm0Wb7nlM6NVzUOJeGhn9JoSd/MvIh4aOVqT0XDwcpsQjdNDWhqL0uFYaKyi/Tx v+mFrQ1YSxjKBXzCQC2wJcXScvljPZPXGHUyYcA/nn9M5A2DP4OYB8KFgo+E92eX H3gDXJgQdP8nlIgxxWT6GYAJJsrH6U5ni+f/hTDjZyadbpXdNY3WlC/YTp7Diwk7 69L+tKCZRseFtiVWPh5vbswM7EkmaaecOBI/09ydJLGa0ZtkemUP+sB8quPnh76a tTLlIUiMhrXZ4DfJhDncwzGzct4KESDOV9y6WbMMsMDpqBZakKlPNfDB1jEYawnS v6dnuEA6Yj1yZNbvsvSf9B/ufN79UROxGQPAv6wq/McdhpGfcDE2Kq4j/HxdloRf bii3vrj9kvR3IfMfrXD+WN21FEOsfNlODYchZEq+VGdDOtpWuxZ53Rt/y+oSM34q MyBrAHumgSFxrBIXuXgGPQKDWtuaiZcJeN24w0P4FZTqNPywUcxsSZBJeq/coZNi /GxiJVEvK49y/hzUvx8aCd/Nv7+MNy2JmUj4BvIFUwL5UKWh+SUv7kHlVYcW7I+e oiBCCkXquMAH4BUbvCAw =T+I7 -----END PGP SIGNATURE-----
--- End Message ---
