Your message dated Tue, 24 Dec 2013 21:23:36 +0000 with message-id <e1vvzrw-0005oc...@franck.debian.org> and subject line Bug#730644: fixed in ruby-bio 1.4.3.0001-2 has caused the Debian Bug report #730644, regarding ruby-bio: FTBFS: Error: libxml-ruby library is not present. to be marked as done.
This means that you claim that the problem has been dealt with. If this is not the case it is now your responsibility to reopen the Bug report if necessary, and/or fix the problem forthwith. (NB: If you are a system administrator and have no idea what this message is talking about, this may indicate a serious mail system misconfiguration somewhere. Please contact ow...@bugs.debian.org immediately.) -- 730644: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=730644 Debian Bug Tracking System Contact ow...@bugs.debian.org with problems
--- Begin Message ---Package: ruby-bio Version: 1.4.3.0001-1 Severity: serious Hello there, I tried building your package in a clean unstable chroot, but it failed: > =============================================================================== > Failure: > Error: libxml-ruby library is not present. Please install libxml-ruby > library. It is needed for Bio::PhyloXML module. Unit test for PhyloXML will > not be performed. > <nil> is not true. > test_libxml(Bio::TestPhyloXMLWriter_Check_LibXML) > /«PKGBUILDDIR»/test/unit/bio/db/test_phyloxml_writer.rb:31:in `test_libxml' > 28: module Bio > 29: class TestPhyloXMLWriter_Check_LibXML < Test::Unit::TestCase > 30: def test_libxml > => 31: assert(defined?(LibXML), > 32: "Error: libxml-ruby library is not present. Please > install libxml-ruby library. It is needed for Bio::PhyloXML module. Unit test > for PhyloXML will not be performed.") > 33: end > 34: end #class TestPhyloXMLWriter_Check_LibXML > =============================================================================== > F > =============================================================================== > Failure: > Error: libxml-ruby library is not present. Please install libxml-ruby > library. It is needed for Bio::PhyloXML module. Unit test for PhyloXML will > not be performed. > <nil> is not true. > test_libxml(Bio::TestPhyloXML_Check_LibXML) > /«PKGBUILDDIR»/test/unit/bio/db/test_phyloxml.rb:29:in `test_libxml' > 26: module Bio > 27: class TestPhyloXML_Check_LibXML < Test::Unit::TestCase > 28: def test_libxml > => 29: assert(defined?(LibXML), > 30: "Error: libxml-ruby library is not present. Please > install libxml-ruby library. It is needed for Bio::PhyloXML module. Unit test > for PhyloXML will not be performed.") > 31: end > 32: end #class TestPhyloXML_LibXMLCheck > =============================================================================== I don't know why it is failing, the libxml-ruby library is pulled in via the build-depends. I've attached a full buildlog. Cheers, Andreas -- Andreas Moog, Berliner Str. 29, 36205 Sontra/Germany Ubuntu Developer PGP-encrypted mails preferred (Key-ID: 74DE6624) PGP Fingerprint: 74CD D9FE 5BCB FE0D 13EE 8EEA 61F3 4426 74DE 6624
ruby-bio_1.4.3.0001-1_amd64.build.gz
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--- Begin Message ---Source: ruby-bio Source-Version: 1.4.3.0001-2 We believe that the bug you reported is fixed in the latest version of ruby-bio, which is due to be installed in the Debian FTP archive. A summary of the changes between this version and the previous one is attached. Thank you for reporting the bug, which will now be closed. If you have further comments please address them to 730...@bugs.debian.org, and the maintainer will reopen the bug report if appropriate. Debian distribution maintenance software pp. Cédric Boutillier <bou...@debian.org> (supplier of updated ruby-bio package) (This message was generated automatically at their request; if you believe that there is a problem with it please contact the archive administrators by mailing ftpmas...@ftp-master.debian.org) -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 1.8 Date: Tue, 24 Dec 2013 21:18:56 +0100 Source: ruby-bio Binary: ruby-bio Architecture: source all Version: 1.4.3.0001-2 Distribution: unstable Urgency: low Maintainer: Debian Ruby Extras Maintainers <pkg-ruby-extras-maintain...@lists.alioth.debian.org> Changed-By: Cédric Boutillier <bou...@debian.org> Description: ruby-bio - Ruby tools for computational molecular biology Closes: 720240 730644 Changes: ruby-bio (1.4.3.0001-2) unstable; urgency=low . * debian/ruby-tests.rb: choose to define external encoding if Encoding is defined instead of checking version of Ruby, which was too strict. (Closes: #720240) * Tighten dependency on ruby-libxml and gem2deb to ensure Ruby 2.0 support. (Closes: #730644) * Bump Standards-Version to 3.9.5 (no changes needed) Checksums-Sha1: 5417ac16708c06463ad2fa11897bf1dd02f0d13e 2153 ruby-bio_1.4.3.0001-2.dsc e4ac473553f9eb0a27ede731011aff9d232cd7c3 12342 ruby-bio_1.4.3.0001-2.debian.tar.gz 66b3547f0f4f815c648a79fa385044b20188623e 721318 ruby-bio_1.4.3.0001-2_all.deb Checksums-Sha256: a2d9adf258a8f8e42ece4500114489d0b087ff5d54430116f1c61f6a6b20644f 2153 ruby-bio_1.4.3.0001-2.dsc e4114426b54dee99c7d7c339616527f72f8215654a07ca6cd7aab60cf0495b14 12342 ruby-bio_1.4.3.0001-2.debian.tar.gz 6465dc6a324bec85b1c88c8b26a6be1c1f193b93c0c268aafa611cebbbee675f 721318 ruby-bio_1.4.3.0001-2_all.deb Files: 5f95fbf385d9a370f281996304f532ac 2153 ruby optional ruby-bio_1.4.3.0001-2.dsc 888e2e75c71203046fea5038d6d4da4d 12342 ruby optional ruby-bio_1.4.3.0001-2.debian.tar.gz 4717d63891aad4e33281320efd7c3501 721318 ruby optional ruby-bio_1.4.3.0001-2_all.deb -----BEGIN PGP SIGNATURE----- Version: GnuPG v1.4.15 (GNU/Linux) iQIcBAEBCAAGBQJSue2DAAoJEKkHZFuPn48JmygQAJHRgpMZTR2oM329zGHtaeIM q7WVqO7Eb1ba5bdKTJSBoFLJWwh6ONlK3PW43ppYHGjrAgvcLEi+DrTjUIFB6mYF wr/RnB+jhDh4z6wOugA/vcsO/zVrAWhZb3kOaaT/QG//ReagnyvI4/rbbzzlVv+D cTTVjF2YGwW3NxxLQ+T4WVAvMx1FaWYy7CNng+NF/TfW+3DKqmnn/jgXfFPkYKTn 1aX81AGQ89ctuIZW9CXb4P6Qy7Rag57Mso+nUNLWikicx4v3R/TRaJgyHToarNF6 5d5EMMqc3PSOcTgqv/Ofk/GIFRDZFBIhe4OUUU9Xv1VWYLJdgb8rzV6n6JYGd69I nUgIUFLL/UwmZzTTLPQSSbS6fVYzaPe9N1SavjLyEEhuaX3SbXWWbCGnQyWuUDHU ysMpDJeyJpgIJoCW13wavBOFnba6J72TrvnKDarBJ+eCc5swRS8npyYYXvYuKLjU apGCrWRhCdB+GKa0js/EpTHXU6O7VJhW8Xgs+gklzmhWed2vLqBzq4yD84nhJIvS 2Rb/ZyBeu6AFJXZ3m7iQaBzPSPUXECPKf8DNzIblHrw5qR4qy3rniQYb8iS09kaV yQLxpT2+QxxY2MtqclUw9x+HZiIAVj6MWMcHwbFrQ/Hms8onPYpt9/ldvnXwoQIq JHw+qJFrFoswOeM0ZofH =AJpQ -----END PGP SIGNATURE-----
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