Your message dated Tue, 03 Sep 2013 12:48:12 +0000 with message-id <e1vgq1k-0006ry...@franck.debian.org> and subject line Bug#711426: fixed in libbio-primerdesigner-perl 0.07-3 has caused the Debian Bug report #711426, regarding libbio-primerdesigner-perl: FTBFS with perl 5.18: test failures to be marked as done.
This means that you claim that the problem has been dealt with. If this is not the case it is now your responsibility to reopen the Bug report if necessary, and/or fix the problem forthwith. (NB: If you are a system administrator and have no idea what this message is talking about, this may indicate a serious mail system misconfiguration somewhere. Please contact ow...@bugs.debian.org immediately.) -- 711426: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=711426 Debian Bug Tracking System Contact ow...@bugs.debian.org with problems
--- Begin Message ---Source: libbio-primerdesigner-perl Version: 0.07-1 Severity: important User: debian-p...@lists.debian.org Usertags: perl-5.18-transition Tags: sid jessie This package FTBFS with perl 5.18 from experimental (in a clean sbuild session): # Failed test 'The class isa Bio::PrimerDesigner::Result' # at t/result.t line 20. # The class isn't a 'Bio::PrimerDesigner::Result' it's a '' Can't locate object method "left" via package "Required design paramaters are missing" (perhaps you forgot to load "Required design paramaters are missing"?) at t/result.t line 22. # Looks like you planned 3 tests but ran 2. # Looks like you failed 1 test of 2 run. # Looks like your test exited with 255 just after 2. t/result.t ........... Dubious, test returned 255 (wstat 65280, 0xff00) Failed 2/3 subtests Note also the following warnings which appear throughout: Use of uninitialized value in lc at /build/dom-libbio-primerdesigner-perl_0.07-1 -i386-DVHEtP/libbio-primerdesigner-perl-0.07/blib/lib/Bio/PrimerDesigner.pm line 244. Use of each() on hash after insertion without resetting hash iterator results in undefined behavior, Perl interpreter: 0x8c8e008 at /build/dom-libbio-primerdesigner-perl_0.07-1-i386-DVHEtP/libbio-primerdesigner-perl-0.07/blib/lib/Bio/PrimerDesigner/primer3.pm line 109. -- Dominic Hargreaves | http://www.larted.org.uk/~dom/ PGP key 5178E2A5 from the.earth.li (keyserver,web,email)
--- End Message ---
--- Begin Message ---Source: libbio-primerdesigner-perl Source-Version: 0.07-3 We believe that the bug you reported is fixed in the latest version of libbio-primerdesigner-perl, which is due to be installed in the Debian FTP archive. A summary of the changes between this version and the previous one is attached. Thank you for reporting the bug, which will now be closed. If you have further comments please address them to 711...@bugs.debian.org, and the maintainer will reopen the bug report if appropriate. Debian distribution maintenance software pp. Damyan Ivanov <d...@debian.org> (supplier of updated libbio-primerdesigner-perl package) (This message was generated automatically at their request; if you believe that there is a problem with it please contact the archive administrators by mailing ftpmas...@ftp-master.debian.org) -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 1.8 Date: Tue, 03 Sep 2013 15:30:18 +0300 Source: libbio-primerdesigner-perl Binary: libbio-primerdesigner-perl Architecture: source all Version: 0.07-3 Distribution: unstable Urgency: low Maintainer: Debian Perl Group <pkg-perl-maintain...@lists.alioth.debian.org> Changed-By: Damyan Ivanov <d...@debian.org> Description: libbio-primerdesigner-perl - Perl module to design PCR primers using primer3 and epcr Closes: 711426 Changes: libbio-primerdesigner-perl (0.07-3) unstable; urgency=low . * Team upload . * add patch fixing hash manipulation inside each. Fixes test failures with perl 5.18 (Closes: #711426) Checksums-Sha1: bcb2e919fd8eaf5cfd275b3ce692e88362239d0f 2369 libbio-primerdesigner-perl_0.07-3.dsc 084c1321ff4a09be4c09e7a697057055d6f08efa 4917 libbio-primerdesigner-perl_0.07-3.debian.tar.gz 1f44e809915be97b74192ea20c01b996e518f3f3 45834 libbio-primerdesigner-perl_0.07-3_all.deb Checksums-Sha256: b89362b81de60de40f1c5b86fef7f786bbd4800f072fa525909cb2687fd35675 2369 libbio-primerdesigner-perl_0.07-3.dsc d8f30c02b83cb5269b24f2ea152a075f95afd25211171cfd9b68fb8df0a448e1 4917 libbio-primerdesigner-perl_0.07-3.debian.tar.gz a3aafea057877cb27977f765450717623df22fe51691195f2051be7230e4cee5 45834 libbio-primerdesigner-perl_0.07-3_all.deb Files: fef151f8ab9137c6ca0435e98ca84eca 2369 perl optional libbio-primerdesigner-perl_0.07-3.dsc b767f7c42b1aeb27349c3109fa80329e 4917 perl optional libbio-primerdesigner-perl_0.07-3.debian.tar.gz 2fc3aa12d3883d0bbf06c50a7192247c 45834 perl optional libbio-primerdesigner-perl_0.07-3_all.deb -----BEGIN PGP SIGNATURE----- Version: GnuPG v1.4.14 (GNU/Linux) iQIcBAEBCAAGBQJSJdbdAAoJENu+nU2Z0qAEEcYP/iePIl5u6Q4WeYnGfvLf07OG m8mTCKQl/sY1Bq7usXyyQWa49R8to55PROY0oiNK+J3vZ6kyipmDSCZZpzHgw7Tu DOhugiuK92+RLPTci0tamWgMtF+vv+5eyF4tQEiwkQJXvF1bmqZnj+qWRFj3DwU9 EsZayhbToy/0pyApJSSptx3t08ezNlY+Cbk8FNhVvI54Oxq0fNUq5YSKPYZFhwc3 esa/bolHs5va4CJ5Zth6Y60iilUXSQqiOxOefbCEjgcPgFr7IL8fBcJuTQ3C3iKR Yt9g3AYYAkWiFm83velE4oGayCnE6ZZ011IqBADwj4KufE2Cr+dLxUZvQ1MIeorz sL+r0d/QrHvn9asB7m49MvkD2h0SCFHhEEbVPehOQd15++U2sUYvSkzfxjE0XaeI XVfF6tPuIQZMqI+kxJV3erSzv5puS+k0kJ70MzQmioRcd6ieWfYkPvExs2fLwSSp aYgkWZR+ZAkuqa8QkK9snFiboiIzMXfemIaGP4PjFj3ZbibT9+ej+4asDMtdffip VcG68u34cCtSGHWLcuJ32SE1Yw5aglGabBp13hU1pAE6J/siHWiY2032SjS7zdXx 0n/7QrRhQcT2W9tijgn36YwV6LrSlWpJhalfiBNU7AxjL5+85IPpwWk+CZO+SyNT JBphukkPRqm/FCgA/DhW =lhp8 -----END PGP SIGNATURE-----
--- End Message ---
