Your message dated Thu, 01 Aug 2013 11:18:23 +0000 with message-id <e1v4qtj-000716...@franck.debian.org> and subject line Bug#718407: fixed in grinder 0.5.3-2 has caused the Debian Bug report #718407, regarding grinder: fails to install, trying to overwrite other packages files: /usr/share/man/man3/Bio::SeqFeature::Primer.3pm.gz to be marked as done.
This means that you claim that the problem has been dealt with. If this is not the case it is now your responsibility to reopen the Bug report if necessary, and/or fix the problem forthwith. (NB: If you are a system administrator and have no idea what this message is talking about, this may indicate a serious mail system misconfiguration somewhere. Please contact ow...@bugs.debian.org immediately.) -- 718407: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=718407 Debian Bug Tracking System Contact ow...@bugs.debian.org with problems
--- Begin Message ---Package: grinder Version: 0.5.3-1 Severity: serious User: debian...@lists.debian.org Usertags: piuparts Hi, during a test with piuparts I noticed your package failed to install because it tries to overwrite other packages files without declaring a Breaks+Replaces relation. See policy 7.6 at http://www.debian.org/doc/debian-policy/ch-relationships.html#s-replaces >From the attached log (scroll to the bottom...): Selecting previously unselected package grinder. (Reading database ... 10128 files and directories currently installed.) Unpacking grinder (from .../grinder_0.5.3-1_all.deb) ... dpkg: error processing /var/cache/apt/archives/grinder_0.5.3-1_all.deb (--unpack): trying to overwrite '/usr/share/man/man3/Bio::SeqFeature::Primer.3pm.gz', which is also in package libbio-perl-perl 1.6.901-3 dpkg-deb: error: subprocess paste was killed by signal (Broken pipe) Errors were encountered while processing: /var/cache/apt/archives/grinder_0.5.3-1_all.deb cheers, Andreas
grinder_0.5.3-1.log.gz
Description: GNU Zip compressed data
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--- Begin Message ---Source: grinder Source-Version: 0.5.3-2 We believe that the bug you reported is fixed in the latest version of grinder, which is due to be installed in the Debian FTP archive. A summary of the changes between this version and the previous one is attached. Thank you for reporting the bug, which will now be closed. If you have further comments please address them to 718...@bugs.debian.org, and the maintainer will reopen the bug report if appropriate. Debian distribution maintenance software pp. Andreas Tille <ti...@debian.org> (supplier of updated grinder package) (This message was generated automatically at their request; if you believe that there is a problem with it please contact the archive administrators by mailing ftpmas...@ftp-master.debian.org) -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA1 Format: 1.8 Date: Thu, 01 Aug 2013 11:05:04 +0200 Source: grinder Binary: grinder Architecture: source all Version: 0.5.3-2 Distribution: unstable Urgency: low Maintainer: Debian Med Packaging Team <debian-med-packag...@lists.alioth.debian.org> Changed-By: Andreas Tille <ti...@debian.org> Description: grinder - Versatile omics shotgun and amplicon sequencing read simulator Closes: 718407 Changes: grinder (0.5.3-2) unstable; urgency=low . * debian/rules: - clean target should recreate original tarball - Move some files duplicated from bioperl out of the way in configure step and restore them in clean target Closes: #718407 Checksums-Sha1: f41848a8ac1b94dba30f9a44165fb156c4de0a8f 1421 grinder_0.5.3-2.dsc aaf31e82d3c093c9f5a9f80a87fae9434269239a 3699 grinder_0.5.3-2.debian.tar.gz 9e18936a7a4456eaac687d590953b4b3f21461e5 120840 grinder_0.5.3-2_all.deb Checksums-Sha256: 1607c894819fd4810b061104796f4bf7c345d0a47fbc2e8fc0b5cd4359ce6376 1421 grinder_0.5.3-2.dsc b913e50e5ce6425e67596028c85ed8596be5fc69c6b73fef302ad67ea0decb80 3699 grinder_0.5.3-2.debian.tar.gz 7f730ec178817a7b6f12e5c9bf18c8e63e09828a996b70dc3fffd2819f902525 120840 grinder_0.5.3-2_all.deb Files: d69622897ac5aa92450e0f58f954f2ca 1421 science optional grinder_0.5.3-2.dsc c2e0324b6ef43516a9b718b9ebe08787 3699 science optional grinder_0.5.3-2.debian.tar.gz 650e89bc491313685b80616f6fc69033 120840 science optional grinder_0.5.3-2_all.deb -----BEGIN PGP SIGNATURE----- Version: GnuPG v1.4.14 (GNU/Linux) iEYEARECAAYFAlH6P5sACgkQYDBbMcCf01oahQCfb3KV1qS73Dc6kncue+fUQ4Bl MMAAnR/8pWFHYB22s8a14tGYJ5ZscC5U =ojrU -----END PGP SIGNATURE-----
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