Control: merge 680804 -1 On 2013-05-09 10:11:33, Lucas Nussbaum wrote: > Source: odin > Version: 1.8.5-2 > Severity: serious > Tags: jessie sid > User: debian...@lists.debian.org > Usertags: qa-ftbfs-20130509 qa-ftbfs > Justification: FTBFS on amd64 > > Hi, > > During a rebuild of all packages in sid, your package failed to build on > amd64. > > Relevant part: > > cc1: warning: command line option '-fno-rtti' is valid for C++/ObjC++ but > > not for C [enabled by default] > > configure:8829: $? = 0 > > configure:8842: result: no > > configure:8862: checking for gcc option to produce PIC > > configure:9134: result: -fPIC -DPIC > > configure:9146: checking if gcc PIC flag -fPIC -DPIC works > > configure:9164: gcc -c -g -O2 -fPIC -DPIC -DPIC conftest.c >&5 > > configure:9168: $? = 0 > > configure:9181: result: yes > > configure:9205: checking if gcc static flag -static works > > configure:9233: result: yes > > configure:9248: checking if gcc supports -c -o file.o > > configure:9269: gcc -c -g -O2 -o out/conftest2.o conftest.c >&5 > > configure:9273: $? = 0 > > configure:9295: result: yes > > configure:9303: checking if gcc supports -c -o file.o > > configure:9350: result: yes > > configure:9383: checking whether the gcc linker (/usr/bin/ld -m elf_x86_64) > > supports shared libraries > > configure:10374: result: yes > > configure:10411: checking whether -lc should be explicitly linked in > > configure:10416: gcc -c -g -O2 conftest.c >&5 > > configure:10419: $? = 0 > > configure:10434: gcc -shared conftest.o -v -Wl,-soname -Wl,conftest -o > > conftest 2\>\&1 \| /bin/grep -lc \>/dev/null 2\>\&1 > > configure:10437: $? = 0 > > configure:10449: result: no > > configure:10613: checking dynamic linker characteristics > > configure:11046: gcc -o conftest -g -O2 -Wl,-rpath -Wl,/foo conftest.c > > >&5 > > configure:11046: $? = 0 > > configure:11276: result: GNU/Linux ld.so > > configure:11378: checking how to hardcode library paths into programs > > configure:11403: result: immediate > > configure:11923: checking whether stripping libraries is possible > > configure:11928: result: yes > > configure:11963: checking if libtool supports shared libraries > > configure:11965: result: yes > > configure:11968: checking whether to build shared libraries > > configure:11989: result: yes > > configure:11992: checking whether to build static libraries > > configure:11996: result: yes > > configure:12146: checking for ld used by g++ > > configure:12213: result: /usr/bin/ld -m elf_x86_64 > > configure:12220: checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU > > ld > > configure:12235: result: yes > > configure:12290: checking whether the g++ linker (/usr/bin/ld -m > > elf_x86_64) supports shared libraries > > configure:13203: result: yes > > configure:13231: g++ -c -O3 -fno-tree-vectorize conftest.cpp >&5 > > configure:13234: $? = 0 > > configure:13416: checking for g++ option to produce PIC > > configure:13733: result: -fPIC -DPIC > > configure:13742: checking if g++ PIC flag -fPIC -DPIC works > > configure:13760: g++ -c -O3 -fno-tree-vectorize -fPIC -DPIC -DPIC > > conftest.cpp >&5 > > configure:13764: $? = 0 > > configure:13777: result: yes > > configure:13798: checking if g++ static flag -static works > > configure:13826: result: yes > > configure:13838: checking if g++ supports -c -o file.o > > configure:13859: g++ -c -O3 -fno-tree-vectorize -o out/conftest2.o > > conftest.cpp >&5 > > configure:13863: $? = 0 > > configure:13885: result: yes > > configure:13890: checking if g++ supports -c -o file.o > > configure:13937: result: yes > > configure:13967: checking whether the g++ linker (/usr/bin/ld -m > > elf_x86_64) supports shared libraries > > configure:13996: result: yes > > configure:14133: checking dynamic linker characteristics > > configure:14514: g++ -o conftest -O3 -fno-tree-vectorize -Wl,-rpath > > -Wl,/foo conftest.cpp >&5 > > configure:14514: $? = 0 > > configure:14744: result: GNU/Linux ld.so > > configure:14795: checking how to hardcode library paths into programs > > configure:14820: result: immediate > > configure:14906: checking for sin in -lm > > configure:14931: g++ -o conftest -I/usr/include/vtk-5.4 > > -I/usr/include/vtk-5.6 -I/usr/include/vtk-5.8 -O3 -fno-tree-vectorize > > -I/usr/include/vtk-5.4 -I/usr/include/vtk-5.6 -I/usr/include/vtk-5.8 > > -lvtkGraphics -lvtkFiltering -lQtGui -lQtCore -lofstd -loflog -lpthread -lz > > conftest.cpp -lm >&5 > > configure:14931: $? = 0 > > configure:14940: result: yes > > configure:14948: checking for dlopen in -ldl > > configure:14973: g++ -o conftest -I/usr/include/vtk-5.4 > > -I/usr/include/vtk-5.6 -I/usr/include/vtk-5.8 -O3 -fno-tree-vectorize > > -I/usr/include/vtk-5.4 -I/usr/include/vtk-5.6 -I/usr/include/vtk-5.8 > > -lvtkGraphics -lvtkFiltering -lQtGui -lQtCore -lofstd -loflog -lpthread -lz > > conftest.cpp -ldl -lm >&5 > > configure:14973: $? = 0 > > configure:14982: result: yes > > configure:14991: checking for dlfcn.h > > configure:14991: result: yes > > configure:15001: checking for pthread_create in -lpthread > > configure:15026: g++ -o conftest -I/usr/include/vtk-5.4 > > -I/usr/include/vtk-5.6 -I/usr/include/vtk-5.8 -O3 -fno-tree-vectorize > > -I/usr/include/vtk-5.4 -I/usr/include/vtk-5.6 -I/usr/include/vtk-5.8 > > -lvtkGraphics -lvtkFiltering -lQtGui -lQtCore -lofstd -loflog -lpthread -lz > > conftest.cpp -lpthread -ldl -lm >&5 > > configure:15026: $? = 0 > > configure:15035: result: yes > > configure:15043: checking pthread.h usability > > configure:15043: g++ -c -I/usr/include/vtk-5.4 -I/usr/include/vtk-5.6 > > -I/usr/include/vtk-5.8 -O3 -fno-tree-vectorize -I/usr/include/vtk-5.4 > > -I/usr/include/vtk-5.6 -I/usr/include/vtk-5.8 conftest.cpp >&5 > > configure:15043: $? = 0 > > configure:15043: result: yes > > configure:15043: checking pthread.h presence > > configure:15043: g++ -E -I/usr/include/vtk-5.4 -I/usr/include/vtk-5.6 > > -I/usr/include/vtk-5.8 conftest.cpp > > configure:15043: $? = 0 > > configure:15043: result: yes > > configure:15043: checking for pthread.h > > configure:15043: result: yes > > configure:15054: checking for main in -lz > > configure:15073: g++ -o conftest -I/usr/include/vtk-5.4 > > -I/usr/include/vtk-5.6 -I/usr/include/vtk-5.8 -O3 -fno-tree-vectorize > > -I/usr/include/vtk-5.4 -I/usr/include/vtk-5.6 -I/usr/include/vtk-5.8 > > -lvtkGraphics -lvtkFiltering -lQtGui -lQtCore -lofstd -loflog -lpthread -lz > > conftest.cpp -lz -lpthread -ldl -lm >&5 > > configure:15073: $? = 0 > > configure:15082: result: yes > > configure:15090: checking zlib.h usability > > configure:15090: g++ -c -I/usr/include/vtk-5.4 -I/usr/include/vtk-5.6 > > -I/usr/include/vtk-5.8 -O3 -fno-tree-vectorize -I/usr/include/vtk-5.4 > > -I/usr/include/vtk-5.6 -I/usr/include/vtk-5.8 conftest.cpp >&5 > > configure:15090: $? = 0 > > configure:15090: result: yes > > configure:15090: checking zlib.h presence > > configure:15090: g++ -E -I/usr/include/vtk-5.4 -I/usr/include/vtk-5.6 > > -I/usr/include/vtk-5.8 conftest.cpp > > configure:15090: $? = 0 > > configure:15090: result: yes > > configure:15090: checking for zlib.h > > configure:15090: result: yes > > configure:15100: checking for main in -lgslcblas > > configure:15119: g++ -o conftest -I/usr/include/vtk-5.4 > > -I/usr/include/vtk-5.6 -I/usr/include/vtk-5.8 -O3 -fno-tree-vectorize > > -I/usr/include/vtk-5.4 -I/usr/include/vtk-5.6 -I/usr/include/vtk-5.8 > > -lvtkGraphics -lvtkFiltering -lQtGui -lQtCore -lofstd -loflog -lpthread -lz > > conftest.cpp -lgslcblas -lz -lpthread -ldl -lm >&5 > > configure:15119: $? = 0 > > configure:15128: result: yes > > configure:15134: checking for gsl_multifit_fdfsolver_iterate in -lgsl > > configure:15159: g++ -o conftest -I/usr/include/vtk-5.4 > > -I/usr/include/vtk-5.6 -I/usr/include/vtk-5.8 -O3 -fno-tree-vectorize > > -I/usr/include/vtk-5.4 -I/usr/include/vtk-5.6 -I/usr/include/vtk-5.8 > > -lvtkGraphics -lvtkFiltering -lQtGui -lQtCore -lofstd -loflog -lpthread -lz > > conftest.cpp -lgsl -lgslcblas -lz -lpthread -ldl -lm >&5 > > configure:15159: $? = 0 > > configure:15168: result: yes > > configure:15176: checking gsl/gsl_multifit_nlin.h usability > > configure:15176: g++ -c -I/usr/include/vtk-5.4 -I/usr/include/vtk-5.6 > > -I/usr/include/vtk-5.8 -O3 -fno-tree-vectorize -I/usr/include/vtk-5.4 > > -I/usr/include/vtk-5.6 -I/usr/include/vtk-5.8 conftest.cpp >&5 > > configure:15176: $? = 0 > > configure:15176: result: yes > > configure:15176: checking gsl/gsl_multifit_nlin.h presence > > configure:15176: g++ -E -I/usr/include/vtk-5.4 -I/usr/include/vtk-5.6 > > -I/usr/include/vtk-5.8 conftest.cpp > > configure:15176: $? = 0 > > configure:15176: result: yes > > configure:15176: checking for gsl/gsl_multifit_nlin.h > > configure:15176: result: yes > > configure:15197: checking for i_indx in -lg2c > > configure:15222: g++ -o conftest -I/usr/include/vtk-5.4 > > -I/usr/include/vtk-5.6 -I/usr/include/vtk-5.8 -O3 -fno-tree-vectorize > > -I/usr/include/vtk-5.4 -I/usr/include/vtk-5.6 -I/usr/include/vtk-5.8 > > -lvtkGraphics -lvtkFiltering -lQtGui -lQtCore -lofstd -loflog -lpthread -lz > > conftest.cpp -lg2c -lgslcblas -lz -lpthread -ldl -lm >&5 > > /usr/bin/ld: cannot find -lg2c > > collect2: error: ld returned 1 exit status
The interesting part is: | configure:15405: checking blitz/tinyvec-et.h usability | configure:15405: g++ -c -I/usr/include/vtk-5.4 -I/usr/include/vtk-5.6 -I/usr/include/vtk-5.8 -O3 -fno-tree-vectorize -I/usr/include/vtk-5.4 -I/usr/include/vtk-5.6 -I/usr/include/vtk-5.8 conftest.cpp >&5 | conftest.cpp:56:30: fatal error: blitz/tinyvec-et.h: No such file or directory | compilation terminated. So this is the same as #680804. Even if the includes are updated to the new blitz++ API, odin later fails with: | libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I/«PKGBUILDDIR» -I/usr/share/qt4/include/QtGui -I/usr/share/qt4/include/QtCore -I/usr/share/qt4/include -I. -I/usr/include/dcmtk -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/ofstd -I/usr/include/nifti -I/usr/include/vtk-5.4 -I/usr/include/vtk-5.6 -I/usr/include/vtk-5.8 -I/usr/include/vtk-5.4 -I/usr/include/vtk-5.6 -I/usr/include/vtk-5.8 -O3 -fno-tree-vectorize -c tjarray.cpp -fPIC -DPIC -o .libs/tjarray.o | In file included from ../tjutils/tjstring.h:25:0, | from ../tjutils/tjcomplex.h:24, | from ../tjutils/tjvector.h:23, | from tjarray.h:24, | from tjarray.cpp:1: | ../tjutils/tjtools.h:276:52: error: new declaration 'const char* secure_getenv(const char*)' | In file included from ../tjutils/tjcstd.h:29:0, | from ../tjutils/tjstd.h:29, | from ../tjutils/tjutils.h:28, | from ../tjutils/tjvector.h:22, | from tjarray.h:24, | from tjarray.cpp:1: | /usr/include/stdlib.h:569:14: error: ambiguates old declaration 'char* secure_getenv(const char*)' secure_getenv is now provided by eglibc. Since I don't know if there are any users of odin's secure_getenv and if it's safe to rename or remove odin's version, I stopped investigating here. Regards -- Sebastian Ramacher
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