Ben, I would be interested to hear if you can apply this fix and re-run the upgrade in testing environment.
Agustín, thank you very much for the analysis. Just out of the interest – your /bin/sh is dash or some other shell? Ondrej On Tue, May 14, 2013 at 5:42 PM, Agustín Eijo <ae...@mpba.gov.ar> wrote: > The possible solution is: > > while read -r OLD_DBKEY OLD_DBVALUE ; do > ... > done < $OLD_LIST > > for: > > cat $OLD_LIST | \ > while read -r OLD_DBKEY OLD_DBVALUE ; do > ... > done > > This creates a new child process with diferent variables > > Source: > http://serverfault.com/questions/259339/bash-variable-loses-value-at-end-of-while-read-loop > > Agu > > > > El 13/05/2013 10:44 a.m., Agustín Eijo escribió: > > Sorry, > > Had he made a mistake in the form of restore and The error is not > "db4.7_recover: Build signature doesn't match environment" > > Now I think the problem is in the script upgrade-db with the variable > BERKELEY_DB_FOUND > > The BERKELEY_DB_FOUND is set into the while .. done but out of while > BERKELEY_DB_FOUND is unset and then run: > > # Remove empty environment > rm -rf $CONFIG_DIR/db > > This is the output upgrade-db of with -x > > /usr/lib/cyrus/bin/upgrade-db > + export PATH=/sbin:/usr/sbin:/bin:/usr/bin > + LC_ALL=C gawk /^configdirectory:[[:blank:]]/ { print $2 } > + CONFIG_DIR=/var/lib/cyrus > + date +%Y%m%d-%H%M%S > + BACKUP_DIR=/var/backup/cyrus-imapd/20130513-103004 > + mkdir -p /var/backup/cyrus-imapd/20130513-103004 > + upgradealldb /usr/lib/cyrus/cyrus-db-types.txt > /usr/lib/cyrus/cyrus-db-types.active > + OLD_LIST=/usr/lib/cyrus/cyrus-db-types.active > + NEW_LIST=/usr/lib/cyrus/cyrus-db-types.txt > + DO_UPGRADE_BDB= > + sed -e s/BerkeleyDB// > + LC_ALL=C gawk /^DBENGINE[[:blank:]]/ { print $2 } > /usr/lib/cyrus/cyrus-db-types.active > + OLD_DBVERSION=4.7 > + sed -e s/BerkeleyDB// > + LC_ALL=C gawk /^DBENGINE[[:blank:]]/ { print $2 } > /usr/lib/cyrus/cyrus-db-types.txt > + NEW_DBVERSION=5.1 > + [ 4.7 != 5.1 ] > + DO_UPGRADE_BDB=yes > + DB_UTIL_NOT_FOUND= > + [ ! -x /usr/bin/db4.7_recover ] > + [ ! -x /usr/bin/db5.1_upgrade ] > + [ -n ] > + BERKELEY_DB_FOUND= > + read -r OLD_DBKEY OLD_DBVALUE > + cat /usr/lib/cyrus/cyrus-db-types.active > + LC_ALL=C gawk /^ANNOTATION[[:blank:]]/ { print $2 } > /usr/lib/cyrus/cyrus-db-types.txt > + NEW_DBVALUE=skiplist > + [ -z skiplist ] > + DO_UPGRADE_DB= > + [ skiplist != skiplist ] > + DBFILE= > + DBFILE=annotations.db > + [ -n ] > + [ -f /var/lib/cyrus/annotations.db ] > + [ -n -o -n yes ] > + backupdb annotations.db skiplist 4.7 > + cp -a /var/lib/cyrus/annotations.db > /var/backup/cyrus-imapd/20130513-103004 > + [ -n yes ] > + [ -n ] > + read -r OLD_DBKEY OLD_DBVALUE > + LC_ALL=C gawk /^DBENGINE[[:blank:]]/ { print $2 } > /usr/lib/cyrus/cyrus-db-types.txt > + NEW_DBVALUE=BerkeleyDB5.1 > + [ -z BerkeleyDB5.1 ] > + DO_UPGRADE_DB= > + [ BerkeleyDB5.1 != BerkeleyDB4.7 ] > + DO_UPGRADE_DB=yes > + DBFILE= > + continue > + read -r OLD_DBKEY OLD_DBVALUE > + LC_ALL=C gawk /^DUPLICATE[[:blank:]]/ { print $2 } > /usr/lib/cyrus/cyrus-db-types.txt > + NEW_DBVALUE=skiplist > + [ -z skiplist ] > + DO_UPGRADE_DB= > + [ skiplist != berkeley-nosync ] > + DO_UPGRADE_DB=yes > + DBFILE= > + DBFILE=deliver.db > + [ -n yes ] > + [ -f /var/lib/cyrus/deliver.db ] > + [ -n yes -o -n yes ] > + backupdb deliver.db berkeley-nosync 4.7 > + cp -a /var/lib/cyrus/deliver.db /var/backup/cyrus-imapd/20130513-103004 > + [ ! -d /var/backup/cyrus-imapd/20130513-103004/db -a -d /var/lib/cyrus/db > ] > + mkdir -p /var/backup/cyrus-imapd/20130513-103004/db > + su cyrus -c db4.7_recover -h /var/lib/cyrus/db > + read log_file > + su cyrus -c db4.7_archive -h /var/lib/cyrus/db -l > + cp -a /var/lib/cyrus/db/log.0000000001 > /var/backup/cyrus-imapd/20130513-103004/db > + read log_file > + [ -n yes ] > + BERKELEY_DB_FOUND=yes > + upgradebdb deliver.db 5.1 > + su cyrus -c db5.1_upgrade -h /var/lib/cyrus/db /var/lib/cyrus/deliver.db > + [ -n yes ] > + upgradedb deliver.db berkeley-nosync skiplist > + mktemp /tmp/deliver.db.XXXXXXXX > + TMPFILE=/tmp/deliver.db.mypy2OBF > + /usr/sbin/cvt_cyrusdb /var/lib/cyrus/deliver.db berkeley-nosync > /tmp/deliver.db.mypy2OBF skiplist > Converting from /var/lib/cyrus/deliver.db (berkeley-nosync) to > /tmp/deliver.db.mypy2OBF (skiplist) > + rm -f /var/lib/cyrus/deliver.db > + mv /tmp/deliver.db.mypy2OBF /var/lib/cyrus/deliver.db > + chown cyrus:mail /var/lib/cyrus/deliver.db > + read -r OLD_DBKEY OLD_DBVALUE > + LC_ALL=C gawk /^MBOX[[:blank:]]/ { print $2 } > /usr/lib/cyrus/cyrus-db-types.txt > + NEW_DBVALUE=skiplist > + [ -z skiplist ] > + DO_UPGRADE_DB= > + [ skiplist != skiplist ] > + DBFILE= > + DBFILE=mailboxes.db > + [ -n ] > + [ -f /var/lib/cyrus/mailboxes.db ] > + [ -n -o -n yes ] > + backupdb mailboxes.db skiplist 4.7 > + cp -a /var/lib/cyrus/mailboxes.db /var/backup/cyrus-imapd/20130513-103004 > + [ -n yes ] > + [ -n ] > + read -r OLD_DBKEY OLD_DBVALUE > + LC_ALL=C gawk /^PTS[[:blank:]]/ { print $2 } > /usr/lib/cyrus/cyrus-db-types.txt > + NEW_DBVALUE=skiplist > + [ -z skiplist ] > + DO_UPGRADE_DB= > + [ skiplist != berkeley ] > + DO_UPGRADE_DB=yes > + DBFILE= > + [ -n yes ] > + removedb ptscache.db > + rm -f /var/lib/cyrus/ptscache.db > + continue > + read -r OLD_DBKEY OLD_DBVALUE > + LC_ALL=C gawk /^QUOTA[[:blank:]]/ { print $2 } > /usr/lib/cyrus/cyrus-db-types.txt > + NEW_DBVALUE=quotalegacy > + [ -z quotalegacy ] > + DO_UPGRADE_DB= > + [ quotalegacy != quotalegacy ] > + DBFILE= > + [ -n ] > + [ -n ] > + [ -f /var/lib/cyrus/ ] > + read -r OLD_DBKEY OLD_DBVALUE > + LC_ALL=C gawk /^SEEN[[:blank:]]/ { print $2 } > /usr/lib/cyrus/cyrus-db-types.txt > + NEW_DBVALUE=skiplist > + [ -z skiplist ] > + DO_UPGRADE_DB= > + [ skiplist != skiplist ] > + DBFILE= > + [ -n ] > + [ -n ] > + [ -f /var/lib/cyrus/ ] > + read -r OLD_DBKEY OLD_DBVALUE > + LC_ALL=C gawk /^SUBS[[:blank:]]/ { print $2 } > /usr/lib/cyrus/cyrus-db-types.txt > + NEW_DBVALUE=flat > + [ -z flat ] > + DO_UPGRADE_DB= > + [ flat != flat ] > + DBFILE= > + [ -n ] > + [ -n ] > + [ -f /var/lib/cyrus/ ] > + read -r OLD_DBKEY OLD_DBVALUE > + LC_ALL=C gawk /^TLS[[:blank:]]/ { print $2 } > /usr/lib/cyrus/cyrus-db-types.txt > + NEW_DBVALUE=skiplist > + [ -z skiplist ] > + DO_UPGRADE_DB= > + [ skiplist != berkeley-nosync ] > + DO_UPGRADE_DB=yes > + DBFILE= > + [ -n yes ] > + removedb tls_sessions.db > + rm -f /var/lib/cyrus/tls_sessions.db > + continue > + read -r OLD_DBKEY OLD_DBVALUE > + [ -n yes -a -d /var/lib/cyrus/db ] > + [ -n ] > + rm -rf /var/lib/cyrus/db > + return 0 > + RET=0 > + [ 0 -eq 0 ] > + cp -p /usr/lib/cyrus/cyrus-db-types.txt > /usr/lib/cyrus/cyrus-db-types.active > + exit 0 > > And this is my syslog error: > > /etc/init.d/cyrus-imapd restart > > May 13 10:31:54 tostadora master[30773]: attempting clean shutdown on > SIGQUIT > May 13 10:31:54 tostadora cyrus/notify[30802]: recvfrom failed: Interrupted > system call > May 13 10:31:54 tostadora master[30773]: process 30802 exited, status 71 > May 13 10:31:54 tostadora master[30773]: All children have exited, closing > down > May 13 10:31:54 tostadora master[31252]: process started > May 13 10:31:54 tostadora master[31254]: about to exec /usr/sbin/ctl_cyrusdb > May 13 10:31:54 tostadora cyrus/ctl_cyrusdb[31254]: DBERROR db5: > /var/lib/cyrus/db: No such file or directory > May 13 10:31:54 tostadora cyrus/ctl_cyrusdb[31254]: DBERROR db5: > /var/lib/cyrus/db/__db.001: No such file or directory > May 13 10:31:54 tostadora cyrus/ctl_cyrusdb[31254]: DBERROR db5: > /var/lib/cyrus/db: No such file or directory > May 13 10:31:54 tostadora cyrus/ctl_cyrusdb[31254]: DBERROR db5: > /var/lib/cyrus/db/__db.001: No such file or directory > May 13 10:31:54 tostadora cyrus/ctl_cyrusdb[31254]: DBERROR: dbenv->open > '/var/lib/cyrus/db' failed: No such file or directory > May 13 10:31:54 tostadora cyrus/ctl_cyrusdb[31254]: DBERROR: init() on > berkeley > May 13 10:31:54 tostadora cyrus/ctl_cyrusdb[31254]: DBERROR: writing > /var/lib/cyrus/db/skipstamp: No such file or directory > May 13 10:31:54 tostadora cyrus/ctl_cyrusdb[31254]: DBERROR: init() on > skiplist > May 13 10:31:54 tostadora cyrus/ctl_cyrusdb[31254]: recovering cyrus > databases > May 13 10:31:54 tostadora cyrus/ctl_cyrusdb[31254]: skiplist: checkpointed > /var/lib/cyrus/mailboxes.db (27 records, 2020 bytes) in 0 seconds > May 13 10:31:54 tostadora cyrus/ctl_cyrusdb[31254]: skiplist: checkpointed > /var/lib/cyrus/annotations.db (0 records, 144 bytes) in 0 seconds > May 13 10:31:54 tostadora cyrus/ctl_cyrusdb[31254]: done recovering cyrus > databases > May 13 10:31:54 tostadora master[31274]: about to exec /usr/sbin/cyr_expire > May 13 10:31:54 tostadora cyrus/cyr_expire[31274]: DBERROR db5: > /var/lib/cyrus/db/__db.001: No such file or directory > May 13 10:31:54 tostadora cyrus/cyr_expire[31274]: DBERROR: dbenv->open > '/var/lib/cyrus/db' failed: No such file or directory > May 13 10:31:54 tostadora cyrus/cyr_expire[31274]: DBERROR: init() on > berkeley > May 13 10:31:54 tostadora cyrus/cyr_expire[31274]: DBERROR: reading > /var/lib/cyrus/db/skipstamp, assuming the worst: No such file or directory > May 13 10:31:54 tostadora cyrus/cyr_expire[31274]: skiplist: checkpointed > /var/lib/cyrus/annotations.db (0 records, 144 bytes) in 0 seconds > May 13 10:31:54 tostadora cyrus/cyr_expire[31274]: skiplist: checkpointed > /var/lib/cyrus/mailboxes.db (27 records, 2020 bytes) in 0 seconds > May 13 10:31:54 tostadora cyrus/cyr_expire[31274]: skiplist: checkpointed > /var/lib/cyrus/deliver.db (13 records, 1448 bytes) in 0 seconds > May 13 10:31:54 tostadora cyrus/cyr_expire[31274]: Expunged 0 out of 345 > messages from 27 mailboxes > May 13 10:31:54 tostadora cyrus/cyr_expire[31274]: duplicate_prune: pruning > back 3.00 days > May 13 10:31:54 tostadora cyrus/cyr_expire[31274]: duplicate_prune: purged 0 > out of 13 entries > May 13 10:31:54 tostadora master[31277]: about to exec /usr/sbin/tls_prune > May 13 10:31:54 tostadora cyrus/tls_prune[31277]: DBERROR db5: > /var/lib/cyrus/db/__db.001: No such file or directory > May 13 10:31:54 tostadora cyrus/tls_prune[31277]: DBERROR: dbenv->open > '/var/lib/cyrus/db' failed: No such file or directory > May 13 10:31:54 tostadora cyrus/tls_prune[31277]: DBERROR: init() on > berkeley > May 13 10:31:54 tostadora cyrus/tls_prune[31277]: DBERROR: reading > /var/lib/cyrus/db/skipstamp, assuming the worst: No such file or directory > May 13 10:31:54 tostadora cyrus/tls_prune[31277]: DBERROR: opening > /var/lib/cyrus/tls_sessions.db: cyrusdb error > May 13 10:31:54 tostadora master[31252]: process 31277 exited, status 1 > May 13 10:31:54 tostadora master[31252]: unable to setsocketopt(IP_TOS): > Operation not supported > May 13 10:31:54 tostadora master[31252]: unable to setsocketopt(IP_TOS): > Operation not supported > May 13 10:31:54 tostadora master[31252]: ready for work > May 13 10:31:54 tostadora master[31281]: about to exec > /usr/lib/cyrus/bin/notifyd > May 13 10:31:54 tostadora master[31280]: about to exec /usr/sbin/ctl_cyrusdb > May 13 10:31:54 tostadora cyrus/ctl_cyrusdb[31280]: DBERROR db5: > /var/lib/cyrus/db/__db.001: No such file or directory > May 13 10:31:54 tostadora cyrus/ctl_cyrusdb[31280]: DBERROR: dbenv->open > '/var/lib/cyrus/db' failed: No such file or directory > May 13 10:31:54 tostadora cyrus/ctl_cyrusdb[31280]: DBERROR: init() on > berkeley > May 13 10:31:54 tostadora cyrus/ctl_cyrusdb[31280]: DBERROR: reading > /var/lib/cyrus/db/skipstamp, assuming the worst: No such file or directory > May 13 10:31:54 tostadora cyrus/ctl_cyrusdb[31280]: checkpointing cyrus > databases > May 13 10:31:54 tostadora cyrus/ctl_cyrusdb[31280]: archiving database file: > /var/lib/cyrus/mailboxes.db > May 13 10:31:54 tostadora cyrus/ctl_cyrusdb[31280]: archiving database file: > /var/lib/cyrus/annotations.db > May 13 10:31:54 tostadora cyrus/ctl_cyrusdb[31280]: done checkpointing cyrus > databases > May 13 10:31:54 tostadora master[31252]: process 31280 exited, status 0 > May 13 10:31:54 tostadora cyrus/notify[31281]: DBERROR db5: > /var/lib/cyrus/db/__db.001: No such file or directory > May 13 10:31:54 tostadora cyrus/notify[31281]: DBERROR: dbenv->open > '/var/lib/cyrus/db' failed: No such file or directory > May 13 10:31:54 tostadora cyrus/notify[31281]: DBERROR: init() on berkeley > May 13 10:31:54 tostadora cyrus/notify[31281]: DBERROR: reading > /var/lib/cyrus/db/skipstamp, assuming the worst: No such file or directory > May 13 10:31:54 tostadora cyrus/notify[31281]: executed > > > If hardset BERKELEY_DB_FOUND=yes before than: > > BERKELEY_DB_FOUND=yes > # Create Berkeley DB checkpoint and remove old logs > if [ -n "${DO_UPGRADE_BDB}" -a -d $CONFIG_DIR/db ]; then > if [ -n "${BERKELEY_DB_FOUND}" ]; then > # Create new checkpoint > checkpointbdb $NEW_DBVERSION > else > # Remove empty environment > rm -rf $CONFIG_DIR/db > fi > fi > return 0 > > The syslog looks much better: > > May 13 10:36:15 tostadora master[31319]: attempting clean shutdown on > SIGQUIT > May 13 10:36:15 tostadora cyrus/notify[31348]: recvfrom failed: Interrupted > system call > May 13 10:36:15 tostadora master[31319]: process 31348 exited, status 71 > May 13 10:36:15 tostadora master[31319]: All children have exited, closing > down > May 13 10:36:15 tostadora master[31439]: process started > May 13 10:36:16 tostadora master[31442]: about to exec /usr/sbin/ctl_cyrusdb > May 13 10:36:16 tostadora cyrus/ctl_cyrusdb[31442]: recovering cyrus > databases > May 13 10:36:16 tostadora cyrus/ctl_cyrusdb[31442]: skiplist: checkpointed > /var/lib/cyrus/mailboxes.db (27 records, 2020 bytes) in 0 seconds > May 13 10:36:16 tostadora cyrus/ctl_cyrusdb[31442]: skiplist: checkpointed > /var/lib/cyrus/annotations.db (0 records, 144 bytes) in 0 seconds > May 13 10:36:16 tostadora cyrus/ctl_cyrusdb[31442]: done recovering cyrus > databases > May 13 10:36:16 tostadora master[31461]: about to exec /usr/sbin/cyr_expire > May 13 10:36:16 tostadora cyrus/cyr_expire[31461]: skiplist: checkpointed > /var/lib/cyrus/deliver.db (13 records, 1452 bytes) in 0 seconds > May 13 10:36:16 tostadora cyrus/cyr_expire[31461]: Expunged 0 out of 345 > messages from 27 mailboxes > May 13 10:36:16 tostadora cyrus/cyr_expire[31461]: duplicate_prune: pruning > back 3.00 days > May 13 10:36:16 tostadora cyrus/cyr_expire[31461]: duplicate_prune: purged 0 > out of 13 entries > May 13 10:36:16 tostadora master[31464]: about to exec /usr/sbin/tls_prune > May 13 10:36:16 tostadora cyrus/tls_prune[31464]: DBERROR: opening > /var/lib/cyrus/tls_sessions.db: cyrusdb error > May 13 10:36:16 tostadora master[31439]: process 31464 exited, status 1 > May 13 10:36:16 tostadora master[31439]: unable to setsocketopt(IP_TOS): > Operation not supported > May 13 10:36:16 tostadora master[31439]: unable to setsocketopt(IP_TOS): > Operation not supported > May 13 10:36:16 tostadora master[31439]: ready for work > May 13 10:36:16 tostadora master[31468]: about to exec > /usr/lib/cyrus/bin/notifyd > May 13 10:36:16 tostadora cyrus/notify[31468]: executed > May 13 10:36:16 tostadora master[31467]: about to exec /usr/sbin/ctl_cyrusdb > May 13 10:36:16 tostadora cyrus/ctl_cyrusdb[31467]: checkpointing cyrus > databases > May 13 10:36:16 tostadora cyrus/ctl_cyrusdb[31467]: archiving database file: > /var/lib/cyrus/mailboxes.db > May 13 10:36:16 tostadora cyrus/ctl_cyrusdb[31467]: archiving database file: > /var/lib/cyrus/annotations.db > May 13 10:36:16 tostadora cyrus/ctl_cyrusdb[31467]: done checkpointing cyrus > databases > May 13 10:36:16 tostadora master[31439]: process 31467 exited, status 0 > > But I have two problems more: > > May 13 10:36:16 tostadora cyrus/tls_prune[31464]: DBERROR: opening > /var/lib/cyrus/tls_sessions.db: cyrusdb error > > May 13 10:36:16 tostadora master[31439]: unable to setsocketopt(IP_TOS): > Operation not supported > > Thank, Agu. > > > > > -- > Piense antes de imprimir. Ahorrar papel es cuidar el medio ambiente. > > > > > ________________________________ > Piense antes de imprimir. Ahorrar papel es cuidar el medio ambiente. -- Ondřej Surý <ond...@sury.org> -- To UNSUBSCRIBE, email to debian-bugs-rc-requ...@lists.debian.org with a subject of "unsubscribe". Trouble? Contact listmas...@lists.debian.org
