Your message dated Wed, 20 Jun 2012 21:04:18 +0000 with message-id <e1shs4y-00028s...@franck.debian.org> and subject line Bug#661426: fixed in embassy-domalign 0.1.0+20110714-1 has caused the Debian Bug report #661426, regarding FTBFS to be marked as done.
This means that you claim that the problem has been dealt with. If this is not the case it is now your responsibility to reopen the Bug report if necessary, and/or fix the problem forthwith. (NB: If you are a system administrator and have no idea what this message is talking about, this may indicate a serious mail system misconfiguration somewhere. Please contact ow...@bugs.debian.org immediately.) -- 661426: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=661426 Debian Bug Tracking System Contact ow...@bugs.debian.org with problems
--- Begin Message ---Package: embassy-domalign Version: 0.1.0+20100721-3 Severity: serious Your package fails to build from source: configure.in:9: but the definition used by this AM_INIT_AUTOMAKE configure.in:9: comes from Automake 1.11.1. You should recreate configure.in:9: aclocal.m4 with aclocal and run automake again. WARNING: `automake-1.11' is probably too old. You should only need it if you modified `Makefile.am', `acinclude.m4' or `configure.in'. You might want to install the `Automake' and `Perl' packages. Grab them from any GNU archive site. cd .. && /bin/bash ./config.status src/Makefile depfiles config.status: creating src/Makefile config.status: executing depfiles commands make[2]: Leaving directory `/root/embassy-domalign-0.1.0+20100721/src' make[2]: Entering directory `/root/embassy-domalign-0.1.0+20100721/src' gcc -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"DOMALIGN\" -DVERSION=\"0.1.0\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_DIRENT_H=1 -DSTDC_HEADERS=1 -DHAVE_UNISTD_H=1 -DGETPGRP_VOID=1 -DHAVE_STRFTIME=1 -DHAVE_FORK=1 -DHAVE_VFORK=1 -DHAVE_WORKING_VFORK=1 -DHAVE_WORKING_FORK=1 -DHAVE_VPRINTF=1 -DHAVE_STRDUP=1 -DHAVE_STRSTR=1 -DHAVE_STRCHR=1 -DHAVE_ERAND48=1 -DHAVE_MEMMOVE=1 -DPLD_xwin=1 -DHAVE_LIBM=1 -DPLD_png=1 -DHAVE_MYSQL=1 -DHAVE_POSTGRESQL=1 -I. -I../include -I/usr/include -I/usr/include/eplplot -I/usr/include/epcre -DAJ_LinuxLF -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -DLENDIAN -DNO_AUTH -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat- security -Werror=format-security -Wall -I/usr/lib/emboss/include -I/usr/lib/emboss/include/epcre -I/usr/lib/emboss/include/eplplot -L/usr/lib/emboss/lib -Wl,--rpath,/usr/lib/emboss/lib -O2 -D__amd64__ -I/usr/include/mysql -I/usr/include/postgresql -c allversusall.c /bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wall -I/usr/lib/emboss/include -I/usr/lib/emboss/include/epcre -I/usr/lib/emboss/include/eplplot -L/usr/lib/emboss/lib -Wl,--rpath,/usr/lib/emboss/lib -O2 -D__amd64__ -I/usr/include/mysql -I/usr/include/postgresql -Wl,--as-needed -rdynamic -L/usr/lib/mysql -lmysqlclient -L/usr/lib -lpq -o allversusall allversusall.o -L/usr/lib -lnucleus -lacd -lajaxdb -lensembl -lajaxg -lajax -leexpat -lepcre -lezlib -leplplot -lX11 -lm -lgd -lpng -lz -lm libtool: link: gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wall -I/usr/lib/emboss/include -I/usr/lib/emboss/include/epcre -I/usr/lib/emboss/include/eplplot -Wl,--rpath -Wl,/usr/lib/emboss/lib -O2 -D__amd64__ -I/usr/include/mysql -I/usr/include/postgresql -Wl,--as-needed -rdynamic -o allversusall allversusall.o -L/usr/lib/emboss/lib -L/usr/lib/mysql -lmysqlclient -L/usr/lib -lpq -lnucleus -lacd -lajaxdb -lensembl -lajaxg -lajax -leexpat -lepcre -lezlib -leplplot -lX11 /usr/lib/libgd.so -lpng -lz -lm /usr/bin/ld: cannot find -leexpat /usr/bin/ld: cannot find -lezlib collect2: ld returned 1 exit status make[2]: *** [allversusall] Error 1 make[2]: Leaving directory `/root/embassy-domalign-0.1.0+20100721/src' make[1]: *** [all-recursive] Error 1 make[1]: Leaving directory `/root/embassy-domalign-0.1.0+20100721' make: *** [debian/stamp-makefile-build] Error 2 dpkg-buildpackage: error: debian/rules build gave error exit status 2
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--- Begin Message ---Source: embassy-domalign Source-Version: 0.1.0+20110714-1 We believe that the bug you reported is fixed in the latest version of embassy-domalign, which is due to be installed in the Debian FTP archive: embassy-domalign_0.1.0+20110714-1.debian.tar.gz to main/e/embassy-domalign/embassy-domalign_0.1.0+20110714-1.debian.tar.gz embassy-domalign_0.1.0+20110714-1.dsc to main/e/embassy-domalign/embassy-domalign_0.1.0+20110714-1.dsc embassy-domalign_0.1.0+20110714-1_amd64.deb to main/e/embassy-domalign/embassy-domalign_0.1.0+20110714-1_amd64.deb embassy-domalign_0.1.0+20110714.orig.tar.gz to main/e/embassy-domalign/embassy-domalign_0.1.0+20110714.orig.tar.gz A summary of the changes between this version and the previous one is attached. Thank you for reporting the bug, which will now be closed. If you have further comments please address them to 661...@bugs.debian.org, and the maintainer will reopen the bug report if appropriate. Debian distribution maintenance software pp. Andreas Tille <ti...@debian.org> (supplier of updated embassy-domalign package) (This message was generated automatically at their request; if you believe that there is a problem with it please contact the archive administrators by mailing ftpmas...@debian.org) -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA1 Format: 1.8 Date: Tue, 15 May 2012 10:17:55 +0200 Source: embassy-domalign Binary: embassy-domalign Architecture: source amd64 Version: 0.1.0+20110714-1 Distribution: unstable Urgency: low Maintainer: Debian Med Packaging Team <debian-med-packag...@lists.alioth.debian.org> Changed-By: Andreas Tille <ti...@debian.org> Description: embassy-domalign - Extra EMBOSS commands for protein domain alignment Closes: 661426 Changes: embassy-domalign (0.1.0+20110714-1) unstable; urgency=low . * New upstream version (upstream has applied quilt patch) Closes: #661426 * debian/control: - Standards-Version: 3.9.3 (no changes needed) - Adapted versioned (build-)depends to latest emboss version * debian/rules: short dh * debhelper 9 (control+compat) * debian/source/format: 3.0 (quilt) * debian/copyright: DEP5 fixes Checksums-Sha1: 4ad340709eed7b78a7adb24c90f745cde1ee2b87 1655 embassy-domalign_0.1.0+20110714-1.dsc 62c7acfd19c3e2670d4de7da6297c5b57cdd561a 472143 embassy-domalign_0.1.0+20110714.orig.tar.gz 1130b8e6efe7ea62fee20ab97948ce1e92da25e8 6504 embassy-domalign_0.1.0+20110714-1.debian.tar.gz 46b4e6b7a3ec30bb88bb6aaca55e7aba497e7392 114198 embassy-domalign_0.1.0+20110714-1_amd64.deb Checksums-Sha256: 4beb88bc07be4876fd652d82ef28e47c866e6929be3aae12bcce30d3b8d37fac 1655 embassy-domalign_0.1.0+20110714-1.dsc 77f05f71e188307dbb2e4af0b2d32a6707cdc6678ee9e94f402b6a7277cca34f 472143 embassy-domalign_0.1.0+20110714.orig.tar.gz d18f2afcb71d73f97b5408b3e4adfa82f60f3717bf8c8450061ea9513968e2e1 6504 embassy-domalign_0.1.0+20110714-1.debian.tar.gz 3a74ec492565b896f12341319ab6eab9020c563e906266043ffa19b03a81f2d9 114198 embassy-domalign_0.1.0+20110714-1_amd64.deb Files: b692332f774e142a63bc83692ac5fdfc 1655 science optional embassy-domalign_0.1.0+20110714-1.dsc 7ace7fb34d8f232e53006c8ba0efb7f5 472143 science optional embassy-domalign_0.1.0+20110714.orig.tar.gz 2a9f848e700cdcbd69ace5df135b3d4f 6504 science optional embassy-domalign_0.1.0+20110714-1.debian.tar.gz 23571ec9bacfebeff0c2ad696072596a 114198 science optional embassy-domalign_0.1.0+20110714-1_amd64.deb -----BEGIN PGP SIGNATURE----- Version: GnuPG v1.4.12 (GNU/Linux) iEYEARECAAYFAk/iN0YACgkQYDBbMcCf01qp0gCfUaEDqKmbxcbGdfZ4cLUxYpi3 DGIAn0CBvUPEtMVoLklFGj43QGKZ/Brs =qN9g -----END PGP SIGNATURE-----
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