Your message dated Tue, 15 Nov 2011 22:44:55 +0000
with message-id <e1rqrkn-0005ap...@franck.debian.org>
and subject line Bug#643488: fixed in petsc 3.1.dfsg-11.1
has caused the Debian Bug report #643488,
regarding petsc: FTBFS: dpkg-buildpackage: error: dpkg-source --after-build
petsc-3.1.dfsg gave error exit status 1
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)
--
643488: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=643488
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: petsc
Version: 3.1.dfsg-11
Severity: serious
Tags: wheezy sid
User: debian...@lists.debian.org
Usertags: qa-ftbfs-20110923 qa-ftbfs dpkg-source-exit-1
Justification: FTBFS on amd64
Hi,
During a rebuild of all packages in sid, your package failed to build on
amd64.
Relevant part:
> dpkg-genchanges: including full source code in upload
> dpkg-source --after-build petsc-3.1.dfsg
> dpkg-source: info: unapplying ld.patch
> dpkg-source: info: unapplying mumps.patch
> dpkg-source: info: unapplying configure-kfreebsd8.patch
> dpkg-source: info: unapplying clean-no-double-colon.patch
> dpkg-source: info: unapplying sprng-2.patch
> dpkg-source: info: unapplying lib-versions.patch
> dpkg-source: info: unapplying example-src-dir.patch
> dpkg-source: info: unapplying docs.patch
> dpkg-source: info: unapplying build-no-rpath.patch
> dpkg-source: info: unapplying build-debug-nowarn.patch
> dpkg-source: info: unapplying restore-upstream.patch
> patching file conf/petscvariables
> Hunk #1 FAILED at 1.
> 1 out of 1 hunk FAILED -- saving rejects to file conf/petscvariables.rej
> patching file config/BuildSystem/config/packages/config.guess
> dpkg-source: error: LC_ALL=C patch -R -t -N -p1 -u -V never -g0 -E
> --no-backup-if-mismatch <
> petsc-3.1.dfsg/debian/patches/restore-upstream.patch gave error exit status 1
> Hunk #1 FAILED at 1.
> Hunk #3 FAILED at 54.
> Hunk #10 FAILED at 299.
> Hunk #11 succeeded at 346 (offset 3 lines).
> Hunk #12 succeeded at 380 (offset 3 lines).
> Hunk #13 succeeded at 395 (offset 3 lines).
> Hunk #14 FAILED at 406.
> Hunk #15 succeeded at 466 with fuzz 2 (offset 3 lines).
> Hunk #16 FAILED at 504.
> Hunk #17 succeeded at 537 (offset 3 lines).
> Hunk #18 FAILED at 549.
> Hunk #19 succeeded at 577 (offset 3 lines).
> Hunk #20 succeeded at 660 (offset 3 lines).
> Hunk #21 succeeded at 670 (offset 3 lines).
> Hunk #22 FAILED at 699.
> Hunk #23 FAILED at 948.
> Hunk #24 succeeded at 1001 with fuzz 2 (offset 12 lines).
> Hunk #25 FAILED at 1017.
> Hunk #26 FAILED at 1044.
> Hunk #27 FAILED at 1131.
> Hunk #28 FAILED at 1226.
> Hunk #29 FAILED at 1255.
> Hunk #30 succeeded at 1345 (offset 15 lines).
> Hunk #31 succeeded at 1434 (offset 15 lines).
> Hunk #32 succeeded at 1447 (offset 15 lines).
> Hunk #33 succeeded at 1473 (offset 15 lines).
> 13 out of 33 hunks FAILED -- saving rejects to file
> config/BuildSystem/config/packages/config.guess.rej
> patching file config/BuildSystem/config/packages/config.sub
> Hunk #1 FAILED at 1.
> Hunk #3 FAILED at 71.
> Hunk #6 FAILED at 120.
> Hunk #7 FAILED at 149.
> Hunk #8 succeeded at 178 (offset 1 line).
> Hunk #9 succeeded at 194 (offset 1 line).
> Hunk #10 succeeded at 238 (offset 1 line).
> Hunk #11 FAILED at 262.
> Hunk #12 FAILED at 315.
> Hunk #13 FAILED at 349.
> Hunk #14 succeeded at 467 (offset 26 lines).
> Hunk #15 FAILED at 449.
> Hunk #16 FAILED at 497.
> Hunk #17 succeeded at 571 (offset 35 lines).
> Hunk #18 succeeded at 725 (offset 35 lines).
> Hunk #19 FAILED at 701.
> Hunk #20 succeeded at 772 (offset 35 lines).
> Hunk #21 succeeded at 853 (offset 41 lines).
> Hunk #22 succeeded at 877 (offset 41 lines).
> Hunk #23 succeeded at 886 (offset 41 lines).
> Hunk #24 succeeded at 943 (offset 42 lines).
> Hunk #25 succeeded at 969 (offset 42 lines).
> Hunk #26 succeeded at 980 (offset 42 lines).
> Hunk #27 FAILED at 1027.
> Hunk #28 succeeded at 1147 (offset 36 lines).
> Hunk #29 succeeded at 1185 (offset 36 lines).
> Hunk #30 FAILED at 1202.
> Hunk #31 FAILED at 1225.
> Hunk #32 succeeded at 1303 (offset 37 lines).
> Hunk #33 FAILED at 1378.
> Hunk #34 FAILED at 1405.
> Hunk #35 FAILED at 1420.
> Hunk #36 FAILED at 1448.
> Hunk #37 succeeded at 1515 (offset 46 lines).
> Hunk #38 succeeded at 1623 (offset 46 lines).
> Hunk #39 succeeded at 1686 (offset 46 lines).
> 17 out of 39 hunks FAILED -- saving rejects to file
> config/BuildSystem/config/packages/config.sub.rej
> patching file config/configarch/config.guess
> Hunk #1 FAILED at 1.
> Hunk #3 FAILED at 54.
> Hunk #10 FAILED at 299.
> Hunk #11 succeeded at 346 (offset 3 lines).
> Hunk #12 succeeded at 380 (offset 3 lines).
> Hunk #13 succeeded at 395 (offset 3 lines).
> Hunk #14 FAILED at 406.
> Hunk #15 succeeded at 466 with fuzz 2 (offset 3 lines).
> Hunk #16 FAILED at 504.
> Hunk #17 succeeded at 537 (offset 3 lines).
> Hunk #18 FAILED at 549.
> Hunk #19 succeeded at 577 (offset 3 lines).
> Hunk #20 succeeded at 660 (offset 3 lines).
> Hunk #21 succeeded at 670 (offset 3 lines).
> Hunk #22 FAILED at 699.
> Hunk #23 FAILED at 948.
> Hunk #24 succeeded at 1001 with fuzz 2 (offset 12 lines).
> Hunk #25 FAILED at 1017.
> Hunk #26 FAILED at 1044.
> Hunk #27 FAILED at 1131.
> Hunk #28 FAILED at 1226.
> Hunk #29 FAILED at 1255.
> Hunk #30 succeeded at 1345 (offset 15 lines).
> Hunk #31 succeeded at 1434 (offset 15 lines).
> Hunk #32 succeeded at 1447 (offset 15 lines).
> Hunk #33 succeeded at 1473 (offset 15 lines).
> 13 out of 33 hunks FAILED -- saving rejects to file
> config/configarch/config.guess.rej
> patching file config/configarch/config.sub
> Hunk #1 FAILED at 1.
> Hunk #3 FAILED at 71.
> Hunk #6 FAILED at 120.
> Hunk #7 FAILED at 149.
> Hunk #8 succeeded at 178 (offset 1 line).
> Hunk #9 succeeded at 194 (offset 1 line).
> Hunk #10 succeeded at 238 (offset 1 line).
> Hunk #11 FAILED at 262.
> Hunk #12 FAILED at 315.
> Hunk #13 FAILED at 349.
> Hunk #14 succeeded at 467 (offset 26 lines).
> Hunk #15 FAILED at 449.
> Hunk #16 FAILED at 497.
> Hunk #17 succeeded at 571 (offset 35 lines).
> Hunk #18 succeeded at 725 (offset 35 lines).
> Hunk #19 FAILED at 701.
> Hunk #20 succeeded at 772 (offset 35 lines).
> Hunk #21 succeeded at 853 (offset 41 lines).
> Hunk #22 succeeded at 877 (offset 41 lines).
> Hunk #23 succeeded at 886 (offset 41 lines).
> Hunk #24 succeeded at 943 (offset 42 lines).
> Hunk #25 succeeded at 969 (offset 42 lines).
> Hunk #26 succeeded at 980 (offset 42 lines).
> Hunk #27 FAILED at 1027.
> Hunk #28 succeeded at 1147 (offset 36 lines).
> Hunk #29 succeeded at 1185 (offset 36 lines).
> Hunk #30 FAILED at 1202.
> Hunk #31 FAILED at 1225.
> Hunk #32 succeeded at 1303 (offset 37 lines).
> Hunk #33 FAILED at 1378.
> Hunk #34 FAILED at 1405.
> Hunk #35 FAILED at 1420.
> Hunk #36 FAILED at 1448.
> Hunk #37 succeeded at 1515 (offset 46 lines).
> Hunk #38 succeeded at 1623 (offset 46 lines).
> Hunk #39 succeeded at 1686 (offset 46 lines).
> 17 out of 39 hunks FAILED -- saving rejects to file
> config/configarch/config.sub.rej
> dpkg-buildpackage: error: dpkg-source --after-build petsc-3.1.dfsg gave error
> exit status 1
> ────────────────────────────────────────────────────────────────────────────────
> Build finished at 20110923-2359
The full build log is available from:
http://people.debian.org/~lucas/logs/2011/09/23/petsc_3.1.dfsg-11_lsid64.buildlog
This is probably due to special hand-fiddling with debian/patches/*
quilt series. With dpkg >= 1.16.0, "When dpkg-source automatically applies
patches at the start of the build process, it will also automatically unapply
them at the end of a successful build." [0]
[0] http://lists.debian.org/debian-devel-announce/2011/09/msg00001.html
A list of current common problems and possible solutions is available at
http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute!
About the archive rebuild: The rebuild was done on about 50 AMD64 nodes
of the Grid'5000 platform, using a clean chroot. Internet was not
accessible from the build systems.
--- End Message ---
--- Begin Message ---
Source: petsc
Source-Version: 3.1.dfsg-11.1
We believe that the bug you reported is fixed in the latest version of
petsc, which is due to be installed in the Debian FTP archive:
libpetsc3.1-dbg_3.1.dfsg-11.1_amd64.deb
to main/p/petsc/libpetsc3.1-dbg_3.1.dfsg-11.1_amd64.deb
libpetsc3.1-dev_3.1.dfsg-11.1_amd64.deb
to main/p/petsc/libpetsc3.1-dev_3.1.dfsg-11.1_amd64.deb
libpetsc3.1_3.1.dfsg-11.1_amd64.deb
to main/p/petsc/libpetsc3.1_3.1.dfsg-11.1_amd64.deb
petsc-dev_3.1.dfsg-11.1_all.deb
to main/p/petsc/petsc-dev_3.1.dfsg-11.1_all.deb
petsc3.1-doc_3.1.dfsg-11.1_all.deb
to main/p/petsc/petsc3.1-doc_3.1.dfsg-11.1_all.deb
petsc_3.1.dfsg-11.1.debian.tar.gz
to main/p/petsc/petsc_3.1.dfsg-11.1.debian.tar.gz
petsc_3.1.dfsg-11.1.dsc
to main/p/petsc/petsc_3.1.dfsg-11.1.dsc
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 643...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Didier Raboud <o...@debian.org> (supplier of updated petsc package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256
Format: 1.8
Date: Tue, 15 Nov 2011 17:20:34 +0100
Source: petsc
Binary: libpetsc3.1-dev petsc-dev libpetsc3.1 libpetsc3.1-dbg petsc3.1-doc
Architecture: source all amd64
Version: 3.1.dfsg-11.1
Distribution: unstable
Urgency: low
Maintainer: Debian Science Maintainers
<debian-science-maintain...@lists.alioth.debian.org>
Changed-By: Didier Raboud <o...@debian.org>
Description:
libpetsc3.1 - Shared libraries for version 3.1 of PETSc
libpetsc3.1-dbg - Static debugging libraries for PETSc
libpetsc3.1-dev - Static libraries, shared links, header files for PETSc
petsc-dev - Meta-package depending on latest PETSc development package
petsc3.1-doc - Documentation and examples for PETSc
Closes: 643488
Changes:
petsc (3.1.dfsg-11.1) unstable; urgency=low
.
* Non-maintainer upload.
* Don't mix source format 3.0 (quilt) and manual usage of quilt:
- Drop manual quilt calls from debian/rules;
- Drop superfluous quilt Build-Depends.
Closes: #643488
Checksums-Sha1:
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0a269751df5550621c3290b520093b4a8f614644 1670480
petsc_3.1.dfsg-11.1.debian.tar.gz
565ab4c9d76e005b54c858345091fca94995227c 14382 petsc-dev_3.1.dfsg-11.1_all.deb
1be51e4481712ed629506390b6b9afcd4e5f9928 4202288
petsc3.1-doc_3.1.dfsg-11.1_all.deb
6166c40c860277dd6ccb193bccab02a9aeac82fb 4369048
libpetsc3.1-dev_3.1.dfsg-11.1_amd64.deb
f2ee1b398eb36c2522382612ecef6c3b7fa98345 2186822
libpetsc3.1_3.1.dfsg-11.1_amd64.deb
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libpetsc3.1-dbg_3.1.dfsg-11.1_amd64.deb
Checksums-Sha256:
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petsc_3.1.dfsg-11.1.dsc
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petsc_3.1.dfsg-11.1.debian.tar.gz
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petsc-dev_3.1.dfsg-11.1_all.deb
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petsc3.1-doc_3.1.dfsg-11.1_all.deb
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libpetsc3.1-dev_3.1.dfsg-11.1_amd64.deb
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libpetsc3.1_3.1.dfsg-11.1_amd64.deb
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libpetsc3.1-dbg_3.1.dfsg-11.1_amd64.deb
Files:
238318aaa61452d9ade875eda15a9689 2547 devel extra petsc_3.1.dfsg-11.1.dsc
faf316bbc73b04dfdf08b52666875625 1670480 devel extra
petsc_3.1.dfsg-11.1.debian.tar.gz
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petsc-dev_3.1.dfsg-11.1_all.deb
c384c04fac577507cddd672c1a92b7df 4202288 doc extra
petsc3.1-doc_3.1.dfsg-11.1_all.deb
32155fa31243b6842361217eb7f91f83 4369048 libdevel extra
libpetsc3.1-dev_3.1.dfsg-11.1_amd64.deb
ddfc114ffae61a74dd6ab826318b534c 2186822 libs extra
libpetsc3.1_3.1.dfsg-11.1_amd64.deb
8e1d8cd1b78aadf5a430976dc4cbf161 4635452 debug extra
libpetsc3.1-dbg_3.1.dfsg-11.1_amd64.deb
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