Your message dated Thu, 09 Jun 2011 02:48:11 +0000
with message-id <e1quvi3-0007i2...@franck.debian.org>
and subject line Bug#629656: fixed in ncbi-blast+ 2.2.25-2
has caused the Debian Bug report #629656,
regarding ncbi-blast+: FTBFS everywhere for assorted reasons
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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--
629656: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=629656
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Package: ncbi-blast+
Version: 2.2.25-1
Severity: serious
Justification: fails to build from source
All the automated builds of ncbi-blast+ have failed; i386 got
farthest, but ran into an embarrassing failure to account for
binary-only builds. Other architectures, particularly the non-Linux
ones, encountered deeper issues; I'll look into them all when I get a
chance (perhaps this evening), but am meanwhile filing this bug to
note that I'm aware of them.
--- End Message ---
--- Begin Message ---
Source: ncbi-blast+
Source-Version: 2.2.25-2
We believe that the bug you reported is fixed in the latest version of
ncbi-blast+, which is due to be installed in the Debian FTP archive:
ncbi-blast+-legacy_2.2.25-2_all.deb
to main/n/ncbi-blast+/ncbi-blast+-legacy_2.2.25-2_all.deb
ncbi-blast+_2.2.25-2.debian.tar.gz
to main/n/ncbi-blast+/ncbi-blast+_2.2.25-2.debian.tar.gz
ncbi-blast+_2.2.25-2.dsc
to main/n/ncbi-blast+/ncbi-blast+_2.2.25-2.dsc
ncbi-blast+_2.2.25-2_amd64.deb
to main/n/ncbi-blast+/ncbi-blast+_2.2.25-2_amd64.deb
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 629...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Aaron M. Ucko <u...@debian.org> (supplier of updated ncbi-blast+ package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256
Format: 1.8
Date: Wed, 08 Jun 2011 21:42:52 -0400
Source: ncbi-blast+
Binary: ncbi-blast+ ncbi-blast+-legacy
Architecture: source amd64 all
Version: 2.2.25-2
Distribution: unstable
Urgency: low
Maintainer: Debian Med Packaging Team
<debian-med-packag...@lists.alioth.debian.org>
Changed-By: Aaron M. Ucko <u...@debian.org>
Description:
ncbi-blast+ - next generation suite of BLAST sequence search tools
ncbi-blast+-legacy - NCBI Blast legacy call script
Closes: 629656
Changes:
ncbi-blast+ (2.2.25-2) unstable; urgency=low
.
* Team upload.
* Fix several sources of build failures (closes: #629656):
- debian/rules (override_dh_install): Correctly support building only
architecture-dependent packages.
(DEB_CONFIGURE_EXTRA_FLAGS): Add --without-caution to override the
upstream build system's reluctance to build shared libraries on the
Hurd or kFreeBSD, which it doesn't specifically recognize. Limit C++
optimization level to -O (rather than the default -O2) on mips(el),
on which g++ otherwise crashes. :-/
- debian/patches/support_other_cpus (new; committed upstream too):
build correctly on architectures that wound up defining
NCBI_SLOW_ATOMIC_SWAP (spuriously in the case of powerpc,
whose detection the patch fixes as well).
Checksums-Sha1:
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ed5ae4a09765cfb99888398dbc87cd7aa099c25c 9686
ncbi-blast+_2.2.25-2.debian.tar.gz
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ncbi-blast+_2.2.25-2_amd64.deb
7039b87193a36a91498ac3cdfc887499be9a6288 5542
ncbi-blast+-legacy_2.2.25-2_all.deb
Checksums-Sha256:
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ncbi-blast+_2.2.25-2.dsc
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ncbi-blast+_2.2.25-2.debian.tar.gz
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ncbi-blast+_2.2.25-2_amd64.deb
23e4c004c0d456ecaf818395474f48f42a36a1c8602c0ce8dc9d07e68750f5ba 5542
ncbi-blast+-legacy_2.2.25-2_all.deb
Files:
ab068a3183c18a9c856e54954ab0b1a6 2120 science optional ncbi-blast+_2.2.25-2.dsc
7fc6df4a3874a990937041379258990f 9686 science optional
ncbi-blast+_2.2.25-2.debian.tar.gz
35ae840cb4516f90c64d9c62508a2148 11243326 science optional
ncbi-blast+_2.2.25-2_amd64.deb
8dd830f559492bf2354aa18c5320a18b 5542 science optional
ncbi-blast+-legacy_2.2.25-2_all.deb
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