Your message dated Wed, 11 May 2011 19:19:37 +0000 with message-id <e1qkewb-0004tj...@franck.debian.org> and subject line Bug#625193: fixed in embassy-domsearch 0.1.0++20100721-3 has caused the Debian Bug report #625193, regarding embassy-domsearch: FTBFS: configure: error: C compiler cannot create executables to be marked as done.
This means that you claim that the problem has been dealt with. If this is not the case it is now your responsibility to reopen the Bug report if necessary, and/or fix the problem forthwith. (NB: If you are a system administrator and have no idea what this message is talking about, this may indicate a serious mail system misconfiguration somewhere. Please contact ow...@bugs.debian.org immediately.) -- 625193: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=625193 Debian Bug Tracking System Contact ow...@bugs.debian.org with problems
--- Begin Message ---Source: embassy-domsearch Version: 0.1.0++20100721-2 Severity: serious Tags: wheezy sid User: debian...@lists.debian.org Usertags: qa-ftbfs-20110502 qa-ftbfs Justification: FTBFS on amd64 Hi, During a rebuild of all packages in sid, your package failed to build on amd64. Relevant part: > make[1]: Entering directory > `/build/user-embassy-domsearch_0.1.0++20100721-2-amd64-m0u2fH/embassy-domsearch-0.1.0++20100721' > make[1]: Leaving directory > `/build/user-embassy-domsearch_0.1.0++20100721-2-amd64-m0u2fH/embassy-domsearch-0.1.0++20100721' > make: [makefile-clean] Error 2 (ignored) > rm -f debian/stamp-autotools > rmdir --ignore-fail-on-non-empty . > rmdir: failed to remove `.': Invalid argument > make: [makefile-clean] Error 1 (ignored) > for i in ./config.guess ./config.sub ; do \ > if test -e $i.cdbs-orig ; then \ > mv $i.cdbs-orig $i ; \ > fi ; \ > done > dh_clean > dh_clean: Compatibility levels before 5 are deprecated. > rm -f debian/stamp-autotools-files > dpkg-source -b embassy-domsearch-0.1.0++20100721 > dpkg-source: warning: no source format specified in debian/source/format, see > dpkg-source(1) > dpkg-source: info: using source format `1.0' > dpkg-source: info: building embassy-domsearch using existing > embassy-domsearch_0.1.0++20100721.orig.tar.gz > dpkg-source: info: building embassy-domsearch in > embassy-domsearch_0.1.0++20100721-2.diff.gz > dpkg-source: info: building embassy-domsearch in > embassy-domsearch_0.1.0++20100721-2.dsc > debian/rules build > test -x debian/rules > mkdir -p "." > echo 5 >debian/compat > if test -e /usr/share/misc/config.guess ; then \ > for i in ./config.guess ; do \ > if ! test -e $i.cdbs-orig ; then \ > mv $i $i.cdbs-orig ; \ > cp --remove-destination > /usr/share/misc/config.guess $i ; \ > fi ; \ > done ; \ > fi > if test -e /usr/share/misc/config.sub ; then \ > for i in ./config.sub ; do \ > if ! test -e $i.cdbs-orig ; then \ > mv $i $i.cdbs-orig ; \ > cp --remove-destination > /usr/share/misc/config.sub $i ; \ > fi ; \ > done ; \ > fi > touch debian/stamp-autotools-files > chmod a+x > /build/user-embassy-domsearch_0.1.0++20100721-2-amd64-m0u2fH/embassy-domsearch-0.1.0++20100721/./configure > mkdir -p . > cd . && CFLAGS="-g -O2 -g -O2 -Wall -I/usr/lib/emboss/include > -I/usr/lib/emboss/include/epcre -I/usr/lib/emboss/include/eplplot > -L/usr/lib/emboss/lib -R/usr/lib/emboss/lib" CXXFLAGS="-g -O2 -g -O2 -Wall" > CPPFLAGS="" LDFLAGS=" -Wl,--as-needed" > /build/user-embassy-domsearch_0.1.0++20100721-2-amd64-m0u2fH/embassy-domsearch-0.1.0++20100721/./configure > --build=x86_64-linux-gnu --prefix=/usr --includedir="\${prefix}/include" > --mandir="\${prefix}/share/man" --infodir="\${prefix}/share/info" > --sysconfdir=/etc --localstatedir=/var > --libexecdir="\${prefix}/lib/embassy-domsearch" --srcdir=. > --disable-maintainer-mode --disable-dependency-tracking > --disable-silent-rules --enable-systemlibs > configure: WARNING: unrecognized options: --disable-maintainer-mode, > --disable-silent-rules > checking for a BSD-compatible install... /usr/bin/install -c > checking whether build environment is sane... yes > checking for a thread-safe mkdir -p... /bin/mkdir -p > checking for gawk... no > checking for mawk... mawk > checking whether make sets $(MAKE)... yes > checking build system type... x86_64-pc-linux-gnu > checking host system type... x86_64-pc-linux-gnu > checking for style of include used by make... GNU > checking for gcc... gcc > checking whether the C compiler works... no > configure: error: in > `/build/user-embassy-domsearch_0.1.0++20100721-2-amd64-m0u2fH/embassy-domsearch-0.1.0++20100721': > configure: error: C compiler cannot create executables > See `config.log' for more details. > make: *** [debian/stamp-autotools] Error 77 The full build log is available from: http://people.debian.org/~lucas/logs/2011/05/02/embassy-domsearch_0.1.0++20100721-2_lsid64.buildlog A list of current common problems and possible solutions is available at http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute! About the archive rebuild: The rebuild was done on about 50 AMD64 nodes of the Grid'5000 platform, using a clean chroot. Internet was not accessible from the build systems. -- | Lucas Nussbaum | lu...@lucas-nussbaum.net http://www.lucas-nussbaum.net/ | | jabber: lu...@nussbaum.fr GPG: 1024D/023B3F4F |
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--- Begin Message ---Source: embassy-domsearch Source-Version: 0.1.0++20100721-3 We believe that the bug you reported is fixed in the latest version of embassy-domsearch, which is due to be installed in the Debian FTP archive: embassy-domsearch_0.1.0++20100721-3.diff.gz to main/e/embassy-domsearch/embassy-domsearch_0.1.0++20100721-3.diff.gz embassy-domsearch_0.1.0++20100721-3.dsc to main/e/embassy-domsearch/embassy-domsearch_0.1.0++20100721-3.dsc embassy-domsearch_0.1.0++20100721-3_amd64.deb to main/e/embassy-domsearch/embassy-domsearch_0.1.0++20100721-3_amd64.deb A summary of the changes between this version and the previous one is attached. Thank you for reporting the bug, which will now be closed. If you have further comments please address them to 625...@bugs.debian.org, and the maintainer will reopen the bug report if appropriate. Debian distribution maintenance software pp. Charles Plessy <ple...@debian.org> (supplier of updated embassy-domsearch package) (This message was generated automatically at their request; if you believe that there is a problem with it please contact the archive administrators by mailing ftpmas...@debian.org) -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 1.8 Date: Wed, 11 May 2011 18:52:14 +0900 Source: embassy-domsearch Binary: embassy-domsearch Architecture: source amd64 Version: 0.1.0++20100721-3 Distribution: unstable Urgency: low Maintainer: Debian Med Packaging Team <debian-med-packag...@lists.alioth.debian.org> Changed-By: Charles Plessy <ple...@debian.org> Description: embassy-domsearch - Extra EMBOSS commands to search for protein domains Closes: 625193 Changes: embassy-domsearch (0.1.0++20100721-3) unstable; urgency=low . * Corrected version mangling in debian/watch. * Set RPATH with “-Wl,--rpath” as GCC 4.6 does not accept “-R” anymore. (debian/rules) Closes: #625193, LP: #771001. * Incremented Standards-Version to reflect conformance with Policy 3.9.2 (debian/control, no changes needed). * Updated debian/embassy-domsearch.lintian-overrides for lintian 2.5. * debian/copyright validated with config-edit. Checksums-Sha1: 00701f2f46383eeab1b56371ce2c5d66ae5beade 2220 embassy-domsearch_0.1.0++20100721-3.dsc 5f6a7b28a8e2ec8a975abf500ee3e235b032bdae 6835 embassy-domsearch_0.1.0++20100721-3.diff.gz 0320e6fc0a9ac43146b2ac3bfad4305bd8653dbe 128218 embassy-domsearch_0.1.0++20100721-3_amd64.deb Checksums-Sha256: 209a27ff520590131cb99f7ac9dda9561a70a7354d7593caa2883e3a5ecb47c4 2220 embassy-domsearch_0.1.0++20100721-3.dsc ba93238928bd53de9df49314bd0fef15c44d90abec541ed3c421d77b6880ce7e 6835 embassy-domsearch_0.1.0++20100721-3.diff.gz ef16f07ff1f2c674dc237921c07c38de4748b74fdefe308c409cad7aa4534de7 128218 embassy-domsearch_0.1.0++20100721-3_amd64.deb Files: 9758446d7383ffdc28881f066e353aaa 2220 science optional embassy-domsearch_0.1.0++20100721-3.dsc 98e3c894cffe07b0ea4a03ee30a05c97 6835 science optional embassy-domsearch_0.1.0++20100721-3.diff.gz 545481baed26c786e6b2ffc9ac742915 128218 science optional embassy-domsearch_0.1.0++20100721-3_amd64.deb -----BEGIN PGP SIGNATURE----- Version: GnuPG v1.4.10 (GNU/Linux) iQIcBAEBCAAGBQJNymI8AAoJEMW9bI8ildUCN9IP/0F2hqhBBldEXZdl/sXjaXqJ OWxLQ6izvkNy5uO42bgyqfSYfRXbEOxkBxqyqabLPFrduWJ1wkOExtlBgiy0KdVA Ue6yeo0BTycNfldNq06C4FP4Mt+y4hDT6yddfRI6uHOmP08EbjD5L4oKk9m1rrOn fS9/XGygNGgh0L5cEUaKDtTx9NcYNAZ3vKDiqEcgXxStSMi9f1idiqEupbj8CvTR YAcpLz64Iz0ZmjoxyK8I3SYeNv7uFahc1eh3zwgZY5rUqfS5PjxDxRHUVzGdScjQ 47V7MyKkHaKuBnWzdvDZcVa/bZ0NSRGse2rpHAczcKwdScE5n0XPFGcBNpV7mAOV kdH7B/g1NSbFNSz8RXowt23Nbyw5tKtOxftZN1lKqZrU33eOAy4UX8Cns4BcdOiF gW6o9VN6lPS5Zbi/bDXesqxRQWtovHaoT2C+PakZOs9qcpD5HfROkFm9wO8ynAOc FXcdXstbx71Wc1Qp0zgJvQ1SuZHk/YCFmoPdkdgrl1yDzPXYYLJ9zYXv6i8OoIcy 4p3aEXwSPdiew3PAzSp120gyjNPlIshqMh/mL7ZPNvCNKxsWF50QzLYwE8KyApcC 8T9RI+tyNLFWfn4oaB8Qz9OSbp7ffgi9U7z9qqRV4n2Gb8YoUCyp8l6Z6Nuv1T2G ciApv08JWMsQ0uZdQEyt =Hx6G -----END PGP SIGNATURE-----
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