Your message dated Wed, 02 Feb 2011 19:02:12 +0000
with message-id <e1pkhy0-0002ao...@franck.debian.org>
and subject line Bug#608844: fixed in pymvpa 0.4.6-1
has caused the Debian Bug report #608844,
regarding pymvpa: FTBFS in sid: error: svm.h: No such file or directory
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)
--
608844: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=608844
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: pymvpa
Version: 0.4.5~dev23-2
Tags: sid
Severity: serious
Justification: fails to build from source
pymvpa failed to build from source in a clean sid i386 chroot (it builds
fine in squeeze). The interesting parts of the build log:
| running build_ext
[...]
| compile options: '-I/usr/include/numpy -I/usr/include/libsvm-2.0/libsvm
-I/usr/include/libsvm -I/usr/local/include/libsvm
-I/usr/local/include/libsvm-2.0/libsvm -I/usr/local/include
-I/usr/lib/pymodules/python2.5/numpy/core/include -I/usr/include/python2.5 -c'
| g++:
/build/sbuild-pymvpa_0.4.5~dev23-2-i386-mFuktT/pymvpa-0.4.5~dev23/build/src.linux-i686-2.5/mvpa/clfs/libsvmc/svmc_wrap.cpp
|
/build/sbuild-pymvpa_0.4.5~dev23-2-i386-mFuktT/pymvpa-0.4.5~dev23/build/src.linux-i686-2.5/mvpa/clfs/libsvmc/svmc_wrap.cpp:2792:17:
error: svm.h: No such file or directory
|
/build/sbuild-pymvpa_0.4.5~dev23-2-i386-mFuktT/pymvpa-0.4.5~dev23/build/src.linux-i686-2.5/mvpa/clfs/libsvmc/svmc_wrap.cpp:2798:
error: 'svm_parameter' does not name a type
|
/build/sbuild-pymvpa_0.4.5~dev23-2-i386-mFuktT/pymvpa-0.4.5~dev23/build/src.linux-i686-2.5/mvpa/clfs/libsvmc/svmc_wrap.cpp:2801:
error: ISO C++ forbids declaration of 'svm_node' with no type
|
/build/sbuild-pymvpa_0.4.5~dev23-2-i386-mFuktT/pymvpa-0.4.5~dev23/build/src.linux-i686-2.5/mvpa/clfs/libsvmc/svmc_wrap.cpp:2801:
error: expected ';' before '*' token
|
/build/sbuild-pymvpa_0.4.5~dev23-2-i386-mFuktT/pymvpa-0.4.5~dev23/build/src.linux-i686-2.5/mvpa/clfs/libsvmc/svmc_wrap.cpp:
In function 'PyObject* svm_node_matrix2numpy_array(svm_node**, int, int)':
|
/build/sbuild-pymvpa_0.4.5~dev23-2-i386-mFuktT/pymvpa-0.4.5~dev23/build/src.linux-i686-2.5/mvpa/clfs/libsvmc/svmc_wrap.cpp:2837:
error: invalid use of incomplete type 'struct svm_node'
|
/build/sbuild-pymvpa_0.4.5~dev23-2-i386-mFuktT/pymvpa-0.4.5~dev23/build/src.linux-i686-2.5/mvpa/clfs/libsvmc/svmc_wrap.cpp:2819:
error: forward declaration of 'struct svm_node'
|
/build/sbuild-pymvpa_0.4.5~dev23-2-i386-mFuktT/pymvpa-0.4.5~dev23/build/src.linux-i686-2.5/mvpa/clfs/libsvmc/svmc_wrap.cpp:2837:
error: invalid use of incomplete type 'struct svm_node'
|
/build/sbuild-pymvpa_0.4.5~dev23-2-i386-mFuktT/pymvpa-0.4.5~dev23/build/src.linux-i686-2.5/mvpa/clfs/libsvmc/svmc_wrap.cpp:2819:
error: forward declaration of 'struct svm_node'
[...and so on]
| error: Command "g++ -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -g
-O2 -g -Wall -O2 -fPIC -I/usr/include/numpy -I/usr/include/libsvm-2.0/libsvm
-I/usr/include/libsvm -I/usr/local/include/libsvm -I/usr/local/include/libsvm-2.0/libsvm
-I/usr/local/include -I/usr/lib/pymodules/python2.5/numpy/core/include
-I/usr/include/python2.5 -c
/build/sbuild-pymvpa_0.4.5~dev23-2-i386-mFuktT/pymvpa-0.4.5~dev23/build/src.linux-i686-2.5/mvpa/clfs/libsvmc/svmc_wrap.cpp
-o
/build/sbuild-pymvpa_0.4.5~dev23-2-i386-mFuktT/pymvpa-0.4.5~dev23/./build/temp.linux-i686-2.5/build/sbuild-pymvpa_0.4.5~dev23-2-i386-mFuktT/pymvpa-0.4.5~dev23/build/src.linux-i686-2.5/mvpa/clfs/libsvmc/svmc_wrap.o"
failed with exit status 1
[...]
| make: *** [debian/python-module-stampdir/python-mvpa-lib] Error 1
--
Jakub Wilk
--- End Message ---
--- Begin Message ---
Source: pymvpa
Source-Version: 0.4.6-1
We believe that the bug you reported is fixed in the latest version of
pymvpa, which is due to be installed in the Debian FTP archive:
pymvpa_0.4.6-1.debian.tar.gz
to main/p/pymvpa/pymvpa_0.4.6-1.debian.tar.gz
pymvpa_0.4.6-1.dsc
to main/p/pymvpa/pymvpa_0.4.6-1.dsc
pymvpa_0.4.6.orig.tar.gz
to main/p/pymvpa/pymvpa_0.4.6.orig.tar.gz
python-mvpa-doc_0.4.6-1_all.deb
to main/p/pymvpa/python-mvpa-doc_0.4.6-1_all.deb
python-mvpa-lib_0.4.6-1_amd64.deb
to main/p/pymvpa/python-mvpa-lib_0.4.6-1_amd64.deb
python-mvpa_0.4.6-1_all.deb
to main/p/pymvpa/python-mvpa_0.4.6-1_all.deb
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 608...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Yaroslav Halchenko <deb...@onerussian.com> (supplier of updated pymvpa package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA1
Format: 1.8
Date: Tue, 01 Feb 2011 13:34:24 -0500
Source: pymvpa
Binary: python-mvpa python-mvpa-doc python-mvpa-lib
Architecture: source all amd64
Version: 0.4.6-1
Distribution: unstable
Urgency: low
Maintainer: NeuroDebian Team <t...@neuro.debian.net>
Changed-By: Yaroslav Halchenko <deb...@onerussian.com>
Description:
python-mvpa - multivariate pattern analysis with Python
python-mvpa-doc - documentation and examples for PyMVPA
python-mvpa-lib - low-level implementations and bindings for PyMVPA
Closes: 608765 608844
Changes:
pymvpa (0.4.6-1) unstable; urgency=low
.
* Upstream bugfix release:
- Compatible with libsvm 3.0 (Closes: #608844)
* Exclude objects.inv from being compressed (Closes: #608765)
Checksums-Sha1:
88091dd1bb1d3c4107d9bb11bc2decf92611e234 1609 pymvpa_0.4.6-1.dsc
d7a28f4387e05bce50856fa483b48b0e550c4465 4176663 pymvpa_0.4.6.orig.tar.gz
7f4b1d7ebf84440f453a72a2ba6cf53f322b3412 8355 pymvpa_0.4.6-1.debian.tar.gz
2c1f40afb859c10072a97f6de239979efa617605 2194560 python-mvpa_0.4.6-1_all.deb
e4ee84611764a7a3e00990cd958fe49efa26cb48 9076088
python-mvpa-doc_0.4.6-1_all.deb
28012966f1d3c1faa47a33280e9e984c9b0bffdf 70456
python-mvpa-lib_0.4.6-1_amd64.deb
Checksums-Sha256:
e43727f768b21c71ccf2f3217bdfffc742764ceb22c74d0e6c5ba1460ab02620 1609
pymvpa_0.4.6-1.dsc
83ab5f78c7d65f2e90b2d0f4b15794fe0b1950345d12f8428f2d4a9edb8ab2ba 4176663
pymvpa_0.4.6.orig.tar.gz
68a08f68e534921f9a5f3cd40c43f9c9776fc1c8fb2ba7d3823dd838c5c6c529 8355
pymvpa_0.4.6-1.debian.tar.gz
1ee70f6935588891b0d813110ff11b0a4d824cb62aeb4952ec03564f501ef9e7 2194560
python-mvpa_0.4.6-1_all.deb
98a1981a6b852a361f59176f2aef1d8db8cac18bbbc223f23e7416ceee184215 9076088
python-mvpa-doc_0.4.6-1_all.deb
15d95510b1259ed1800ef8dd7a0a5d872a2020de8f02663d93f8c40ee05ce4d0 70456
python-mvpa-lib_0.4.6-1_amd64.deb
Files:
ca905afaa65f617121a7d56413fb29c2 1609 python optional pymvpa_0.4.6-1.dsc
7f369c67c8af7c3199b12ad9d7a24177 4176663 python optional
pymvpa_0.4.6.orig.tar.gz
29cd1bd4ec7d7c2091409969d407c5a2 8355 python optional
pymvpa_0.4.6-1.debian.tar.gz
56721abc037c7c329b19df0d72cefbc2 2194560 python optional
python-mvpa_0.4.6-1_all.deb
197eaab3775736e2249ab14ea6b9e71f 9076088 doc optional
python-mvpa-doc_0.4.6-1_all.deb
09c459c9ee64145bf1e9f6540f5cfdf8 70456 python optional
python-mvpa-lib_0.4.6-1_amd64.deb
-----BEGIN PGP SIGNATURE-----
Version: GnuPG v1.4.10 (GNU/Linux)
iEYEARECAAYFAk1JlwIACgkQjRFFY3XAJMjsfwCghOry2mGvlUpVf3aHwPvFNUt4
dyoAn0Q9Y0Uv7pHfB49c6onnu16RRt48
=D+d8
-----END PGP SIGNATURE-----
--- End Message ---
