Your message dated Tue, 15 Sep 2009 23:02:24 +0000
with message-id <e1mnh2w-0002gj...@ries.debian.org>
and subject line Bug#545606: fixed in python-scipy 0.7.0-2
has caused the Debian Bug report #545606,
regarding python-scipy: FTBFS: TypeError: add_extension() got multiple values
for keyword argument 'include_dirs'
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)
--
545606: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=545606
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Package: python-scipy
Version: 0.7.0-1
Severity: serious
User: debian...@lists.debian.org
Usertags: qa-ftbfs-20090907 qa-ftbfs
Justification: FTBFS on amd64
Hi,
During a rebuild of all packages in sid, your package failed to build on
amd64.
Relevant part:
> /usr/bin/fakeroot debian/rules binary
> QUILT_PATCHES=debian/patches quilt push -a || test $? = 2
> File series fully applied, ends at patch swig_ftbfs.dpatch
> dh_testdir
> touch build-stamp
> dh_testdir
> dh_testroot
> dh_clean -k
> dh_installdirs -A
> set -e; for v in 2.4 2.5; do \
>
> d=/build/user-python-scipy_0.7.0-1-amd64-EIbc74/python-scipy-0.7.0/debian/python-scipy;
> \
> mkdir -m 755 -p $d/usr/share/doc/python-scipy; \
> python$v setup.py config_fc --noarch build; \
> python$v setup.py install --prefix $d/usr --no-compile;\
> rm $d/usr/lib/python$v/site-packages/scipy/LICENSE.txt;\
> python$v setup.py clean --all; \
> done
> Warning: No configuration returned, assuming unavailable.
> blas_opt_info:
> blas_mkl_info:
> libraries mkl,vml,guide not found in /usr/local/lib
> libraries mkl,vml,guide not found in /usr/lib64
> libraries mkl,vml,guide not found in /usr/lib
> NOT AVAILABLE
>
> atlas_blas_threads_info:
> Setting PTATLAS=ATLAS
> Disabled atlas_blas_threads_info: (ATLAS is None)
> NOT AVAILABLE
>
> atlas_blas_info:
> Disabled atlas_blas_info: (ATLAS is None)
> NOT AVAILABLE
>
> /usr/lib/python2.4/site-packages/numpy/distutils/system_info.py:1383:
> UserWarning:
> Atlas (http://math-atlas.sourceforge.net/) libraries not found.
> Directories to search for the libraries can be specified in the
> numpy/distutils/site.cfg file (section [atlas]) or by setting
> the ATLAS environment variable.
> warnings.warn(AtlasNotFoundError.__doc__)
> blas_info:
> libraries blas not found in /usr/local/lib
> FOUND:
> libraries = ['blas']
> library_dirs = ['/usr/lib64']
> language = f77
>
> FOUND:
> libraries = ['blas']
> library_dirs = ['/usr/lib64']
> define_macros = [('NO_ATLAS_INFO', 1)]
> language = f77
>
> lapack_opt_info:
> lapack_mkl_info:
> mkl_info:
> libraries mkl,vml,guide not found in /usr/local/lib
> libraries mkl,vml,guide not found in /usr/lib64
> libraries mkl,vml,guide not found in /usr/lib
> NOT AVAILABLE
>
> NOT AVAILABLE
>
> atlas_threads_info:
> Setting PTATLAS=ATLAS
> Disabled atlas_threads_info: (ATLAS is None)
> numpy.distutils.system_info.atlas_threads_info
> NOT AVAILABLE
>
> atlas_info:
> Disabled atlas_info: (ATLAS is None)
> numpy.distutils.system_info.atlas_info
> NOT AVAILABLE
>
> /usr/lib/python2.4/site-packages/numpy/distutils/system_info.py:1290:
> UserWarning:
> Atlas (http://math-atlas.sourceforge.net/) libraries not found.
> Directories to search for the libraries can be specified in the
> numpy/distutils/site.cfg file (section [atlas]) or by setting
> the ATLAS environment variable.
> warnings.warn(AtlasNotFoundError.__doc__)
> lapack_info:
> libraries lapack not found in /usr/local/lib
> FOUND:
> libraries = ['lapack']
> library_dirs = ['/usr/lib64']
> language = f77
>
> FOUND:
> libraries = ['lapack', 'blas']
> library_dirs = ['/usr/lib64']
> define_macros = [('NO_ATLAS_INFO', 1)]
> language = f77
>
> umfpack_info:
> libraries umfpack not found in /usr/local/lib
> amd_info:
> libraries amd not found in /usr/local/lib
> FOUND:
> libraries = ['amd']
> library_dirs = ['/usr/lib64']
> swig_opts = ['-I/usr/include/suitesparse']
> define_macros = [('SCIPY_AMD_H', None)]
> include_dirs = ['/usr/include/suitesparse']
>
> FOUND:
> libraries = ['umfpack', 'amd']
> library_dirs = ['/usr/lib64']
> swig_opts = ['-I/usr/include/suitesparse', '-I/usr/include/suitesparse']
> define_macros = [('SCIPY_UMFPACK_H', None), ('SCIPY_AMD_H', None)]
> include_dirs = ['/usr/include/suitesparse']
>
> Traceback (most recent call last):
> File "setup.py", line 92, in ?
> setup_package()
> File "setup.py", line 84, in setup_package
> configuration=configuration )
> File "/usr/lib/python2.4/site-packages/numpy/distutils/core.py", line 150,
> in setup
> config = configuration()
> File "setup.py", line 54, in configuration
> config.add_subpackage('scipy')
> File "/usr/lib/python2.4/site-packages/numpy/distutils/misc_util.py", line
> 852, in add_subpackage
> caller_level = 2)
> File "/usr/lib/python2.4/site-packages/numpy/distutils/misc_util.py", line
> 835, in get_subpackage
> caller_level = caller_level + 1)
> File "/usr/lib/python2.4/site-packages/numpy/distutils/misc_util.py", line
> 782, in _get_configuration_from_setup_py
> config = setup_module.configuration(*args)
> File "scipy/setup.py", line 19, in configuration
> config.add_subpackage('sparse')
> File "/usr/lib/python2.4/site-packages/numpy/distutils/misc_util.py", line
> 852, in add_subpackage
> caller_level = 2)
> File "/usr/lib/python2.4/site-packages/numpy/distutils/misc_util.py", line
> 835, in get_subpackage
> caller_level = caller_level + 1)
> File "/usr/lib/python2.4/site-packages/numpy/distutils/misc_util.py", line
> 782, in _get_configuration_from_setup_py
> config = setup_module.configuration(*args)
> File "scipy/sparse/setup.py", line 12, in configuration
> config.add_subpackage('linalg')
> File "/usr/lib/python2.4/site-packages/numpy/distutils/misc_util.py", line
> 852, in add_subpackage
> caller_level = 2)
> File "/usr/lib/python2.4/site-packages/numpy/distutils/misc_util.py", line
> 835, in get_subpackage
> caller_level = caller_level + 1)
> File "/usr/lib/python2.4/site-packages/numpy/distutils/misc_util.py", line
> 782, in _get_configuration_from_setup_py
> config = setup_module.configuration(*args)
> File "scipy/sparse/linalg/setup.py", line 9, in configuration
> config.add_subpackage(('dsolve'))
> File "/usr/lib/python2.4/site-packages/numpy/distutils/misc_util.py", line
> 852, in add_subpackage
> caller_level = 2)
> File "/usr/lib/python2.4/site-packages/numpy/distutils/misc_util.py", line
> 835, in get_subpackage
> caller_level = caller_level + 1)
> File "/usr/lib/python2.4/site-packages/numpy/distutils/misc_util.py", line
> 782, in _get_configuration_from_setup_py
> config = setup_module.configuration(*args)
> File "scipy/sparse/linalg/dsolve/setup.py", line 58, in configuration
> config.add_subpackage('umfpack')
> File "/usr/lib/python2.4/site-packages/numpy/distutils/misc_util.py", line
> 852, in add_subpackage
> caller_level = 2)
> File "/usr/lib/python2.4/site-packages/numpy/distutils/misc_util.py", line
> 835, in get_subpackage
> caller_level = caller_level + 1)
> File "/usr/lib/python2.4/site-packages/numpy/distutils/misc_util.py", line
> 782, in _get_configuration_from_setup_py
> config = setup_module.configuration(*args)
> File "scipy/sparse/linalg/dsolve/umfpack/setup.py", line 27, in
> configuration
> include_dirs = ['/usr/include'],
> TypeError: add_extension() got multiple values for keyword argument
> 'include_dirs'
> make: *** [install] Error 1
The full build log is available from:
http://people.debian.org/~lucas/logs/2009/09/07/python-scipy_0.7.0-1_lsid64.buildlog
A list of current common problems and possible solutions is available at
http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute!
About the archive rebuild: The rebuild was done on about 50 AMD64 nodes
of the Grid'5000 platform, using a clean chroot. Internet was not
accessible from the build systems.
--
| Lucas Nussbaum
| lu...@lucas-nussbaum.net http://www.lucas-nussbaum.net/ |
| jabber: lu...@nussbaum.fr GPG: 1024D/023B3F4F |
--- End Message ---
--- Begin Message ---
Source: python-scipy
Source-Version: 0.7.0-2
We believe that the bug you reported is fixed in the latest version of
python-scipy, which is due to be installed in the Debian FTP archive:
python-scipy_0.7.0-2.diff.gz
to pool/main/p/python-scipy/python-scipy_0.7.0-2.diff.gz
python-scipy_0.7.0-2.dsc
to pool/main/p/python-scipy/python-scipy_0.7.0-2.dsc
python-scipy_0.7.0-2_i386.deb
to pool/main/p/python-scipy/python-scipy_0.7.0-2_i386.deb
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 545...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Debian Python Modules Team <python-modules-t...@lists.alioth.debian.org>
(supplier of updated python-scipy package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA1
Format: 1.8
Date: Tue, 15 Sep 2009 23:30:12 +0200
Source: python-scipy
Binary: python-scipy
Architecture: source i386
Version: 0.7.0-2
Distribution: unstable
Urgency: medium
Maintainer: Debian Python Modules Team
<python-modules-t...@lists.alioth.debian.org>
Changed-By: Debian Python Modules Team
<python-modules-t...@lists.alioth.debian.org>
Description:
python-scipy - scientific tools for Python
Closes: 524131 540504 545606
Changes:
python-scipy (0.7.0-2) unstable; urgency=medium
.
[ Julien Lavergne ]
* debian/copyright : Update Copyright holders (Closes: #524131)
* From Ubuntu, prepare for the future python transition:
- debian/rules:
+ Include /usr/share/python/python.mk
+ Add $(py_setup_install_args) to setup.py install
+ Replace site-packages by *-packages
- debian/control:
+ Bump build-depends to python-all-dev (>= 2.5.4-1~)
.
[ Luca Falavigna ]
* Remove patches, they are no longer needed and also causing FTBFS with
recent python-numpy. Remove quilt machinery too (Closes: #545606).
* debian/copyright: add missing copyright holder (Closes: #540504).
* debian/control: bump Standards-Version to 3.8.3, no changes required.
* debian/watch: fix regex to report correct upstream stable version.
Checksums-Sha1:
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b92b4ca7ca4947814319b3dad340479674a16c88 8033 python-scipy_0.7.0-2.diff.gz
f19107cf3a2b34dbbd8cadf39877f428bccfb9af 8432538 python-scipy_0.7.0-2_i386.deb
Checksums-Sha256:
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python-scipy_0.7.0-2.diff.gz
1d7df9ed800063f363be0791961741e852ed871ba4a9f171f808e538338913b9 8432538
python-scipy_0.7.0-2_i386.deb
Files:
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7a84700db27164f305f115cc79a469ef 8033 python extra python-scipy_0.7.0-2.diff.gz
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python-scipy_0.7.0-2_i386.deb
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--- End Message ---
