Hi Ondrej, Thanks for taking the time to report a bug.
On 7 November 2007 at 21:31, Ondrej Certik wrote: | Package: libopenmpi-dev | Version: 1.2.4-3 | Severity: grave | | --- Please enter the report below this line. --- | | $ wajig install libopenmpi-dev At this point, did you have other MPI packages like LAM or MPICH installed? | Reading package lists... Done | Building dependency tree | Reading state information... Done | The following packages were automatically installed and are no longer required: | libmatheval1 libsuperlu3 libt1-5 libsuperlu3-dev libhdf4g gpsd | libwebkitgdk0d xpdf-common | Use 'apt-get autoremove' to remove them. | The following extra packages will be installed: | libopenmpi1 openmpi-common | The following NEW packages will be installed: | libopenmpi-dev libopenmpi1 openmpi-common | 0 upgraded, 3 newly installed, 0 to remove and 2 not upgraded. | Need to get 1555kB of archives. | After unpacking 6881kB of additional disk space will be used. | Do you want to continue [Y/n]? | Get:1 http://ftp.cz.debian.org unstable/main libopenmpi1 1.2.4-3 [1059kB] | Get:2 http://ftp.cz.debian.org unstable/main openmpi-common 1.2.4-3 [46.4kB] | Get:3 http://ftp.cz.debian.org unstable/main libopenmpi-dev 1.2.4-3 [450kB] This *does* install mpicc.openmpi and friends. Did you by chance ever alter the handling of alternatives in /etc/alternatives? | Fetched 1555kB in 18s (85.3kB/s) | Selecting previously deselected package libopenmpi1. | (Reading database ... 173852 files and directories currently installed.) | Unpacking libopenmpi1 (from .../libopenmpi1_1.2.4-3_i386.deb) ... | Selecting previously deselected package openmpi-common. | Unpacking openmpi-common (from .../openmpi-common_1.2.4-3_all.deb) ... | Selecting previously deselected package libopenmpi-dev. | Unpacking libopenmpi-dev (from .../libopenmpi-dev_1.2.4-3_i386.deb) ... | Setting up libopenmpi1 (1.2.4-3) ... | Setting up openmpi-common (1.2.4-3) ... | Setting up libopenmpi-dev (1.2.4-3) ... | | | $ mpicc | -bash: mpicc: command not found | | | This temporary fix overcomes the problem: | | $ sudo ln -s /usr/bin/opal_wrapper /usr/bin/mpicc | | The same has to be done for all the others: mpif77, mpi90 etc. Yes, but it is supposed to be done automatically, and it generally works. I presonally have only experienced problems when I had previously intervened manually (while testing etc). Could you possibly purge the Open MPI packages as well as other MPI packages, and re-start from a clean slate? The packages are generally in decent shape and you should not have this problem. It is worth seeing if we overlooked something. Thanks for your help, Dirk | | | Ondrej | | --- System information. --- | Architecture: i386 | Kernel: Linux 2.6.22-2-686 | | Debian Release: lenny/sid | 500 unstable ftp.cz.debian.org | | --- Package information. --- | Depends (Version) | Installed | ==============================-+-============ | libopenmpi1 (= 1.2.4-3) | 1.2.4-3 | openmpi-common (= 1.2.4-3) | 1.2.4-3 | | | | _______________________________________________ | Pkg-openmpi-maintainers mailing list | [EMAIL PROTECTED] | http://lists.alioth.debian.org/mailman/listinfo/pkg-openmpi-maintainers -- Three out of two people have difficulties with fractions. -- To UNSUBSCRIBE, email to [EMAIL PROTECTED] with a subject of "unsubscribe". Trouble? Contact [EMAIL PROTECTED]
