Your message dated Sun, 7 Oct 2007 19:41:13 +0200
with message-id <[EMAIL PROTECTED]>
and subject line clustalx segfault with lesstif2=1:0.95.0-2
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--- Begin Message ---
Package: clustalx
Version: 1.83-1.2
The programm 'clustalx' terminates with 'Segmentation fault' soon after
starting when used together with 'lesstif2=1:0.95.0-2'.
The error occurs on a system running Debian/i386/testing. The error
occurs with the following packages installed:
||/ Name Version Beschreibung
+++-======================-======================-============================================================
ii clustalx 1.83-1.2 [Biology] GUI for clustalw
ii lesstif2 1:0.95.0-2 OSF/Motif 2.1 implementation
released under LGPL
ii lesstif2-dev 1:0.95.0-2 development library and
header files for LessTif 2.1
ii libvibrant6-dev 6.1.20061015-1 NCBI libraries for graphic
biology applications (development
ii libvibrant6a 6.1.20061015-1 NCBI libraries for graphic
biology applications
ii ncbi-data 6.1.20061015-1 Platform-independent data for
the NCBI toolkit
ii ncbi-tools-bin 6.1.20061015-1 NCBI libraries for biology
applications (text-based utilitie
ii ncbi-tools-x11 6.1.20061015-1 NCBI libraries for biology
applications (X-based utilities)
If I start clustalx, I get a segmentation fault immediately after starting the
programm:
[EMAIL PROTECTED]: /usr/bin/clustalx
Segmentation fault
If I downgrade 'lesstif2' to the version included in 'Debian/i386/stable'
(etch), clustalx
runs normally.
apt-get --reinstall install 'lesstif2=1:0.94.4-2'
||/ Name Version Beschreibung
+++-======================-======================-============================================================
ii clustalx 1.83-1.2 [Biology] GUI for clustalw
ii lesstif2 1:0.94.4-2 OSF/Motif 2.1 implementation
released under LGPL
ii lesstif2-dev 1:0.95.0-2 development library and
header files for LessTif 2.1
ii libvibrant6-dev 6.1.20061015-1 NCBI libraries for graphic
biology applications (development
ii libvibrant6a 6.1.20061015-1 NCBI libraries for graphic
biology applications
ii ncbi-data 6.1.20061015-1 Platform-independent data for
the NCBI toolkit
ii ncbi-tools-bin 6.1.20061015-1 NCBI libraries for biology
applications (text-based utilitie
ii ncbi-tools-x11 6.1.20061015-1 NCBI libraries for biology
applications (X-based utilities)
I am not sure if this bug has to be assigned to clustalx or to lesstif2.
I have just run another quick test which shows that also the programm 'sequin'
from
package 'ncbi-tools-x11' terminates with 'Segmentation fault' when
'lesstif2=1:0.95.0-2'
is installed. 'clustalx' and 'sequin' both depend on 'libvibrant6a' and
on 'lesstif2'.
--
Peter
-------------------------------------------------------------------
Peter Slickers
Clondiag Chip Technologies
Löbstedter Str. 105
07749 Jena
Germany
-------------------------------------------------------------------
--- End Message ---
--- Begin Message ---
Lesstif2 1:0.95.0-2.1 has reached testing, so I see
no reason to keep this bug around.
Kurt
--- End Message ---
