I think I found the fix. It was updating "rev1line" twice; once in the
case where the current line number is less than the old line number, and
once again where the current line number is less than the new line
number. The latter -- the "new" side is the rev2 side.

The 1-line patch is attached.

Nick Lewycky
--- diff.php.orig	2005-08-26 19:17:06.000000000 -0400
+++ diff.php	2005-08-26 19:16:08.000000000 -0400
@@ -167,7 +167,7 @@
                   else
                      $line = rtrim($nl);
                      
-                  $listing[$index]["rev1line"] = hardspace($line);
+                  $listing[$index]["rev2line"] = hardspace($line);
                   $curnline++;
                }
                else

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