IGV has a lot of dependencies, and the list follows. Many of these dependencies are already in Debian; many others are not. Where the dependency is satisfied, I've given the Debian package name. Where it's not satisfied, I've given the upstream URL.
Cheers, Shaun colt.jar http://acs.lbl.gov/software/colt/ commons-math-1.1.jar libcommons-math-java concurrent.jar libconcurrent-java jargs.jar libjargs-java jhdf5.jar libjhdf5-java jibble.jar libjlibeps-java jide-action.jar http://www.jidesoft.com/ jide-common.jar " jide-components.jar " jide-dialogs.jar " jide-dock.jar " jide-grids.jar " junit-4.5.jar junit4 jlfgr-1_0.jar http://java.sun.com/developer/techDocs/hi/repository/ ledatastream.jar http://mindprod.com/products1.html#LEDATASTREAM log4j-1.2.15.jar liblog4j1.2-java maf.jar http://www.broadinstitute.org/genome_bio/siphy/ sam-1.08.jar http://picard.sourceforge.net/ swing-layout-1.0.jar libswing-layout-java -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of "unsubscribe". Trouble? Contact listmas...@lists.debian.org