Package: sagemath Version: 3.0.5dfsg-4 Severity: important
networkx had major changes in API in 0.99. They are outlined in http://networkx.lanl.gov/reference/api_0.99.html the one I spotted out in the discussion with networkx maintainer: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=565319 current sagemath seems to rely on 0.36 API of networkx: ,--- | $> dpkg -L sagemath | xargs grep networkx.*Graph | head | /usr/share/doc/sagemath/doc-main/ref/sage/sage.graphs.graph-generators.tex:sage: n = networkx.complete_bipartite_graph(389,157); spring_big = Graph(n) # long time | /usr/share/doc/sagemath/doc-main/ref/sage/sage.graphs.graph-generators.tex:sage: n = networkx.complete_graph(389); spring389 = Graph(n) | /usr/share/doc/sagemath/doc-main/ref/sage/sage.graphs.graph.tex:sage: isinstance(N, networkx.graph.Graph) | /usr/share/doc/sagemath/doc-main/ref/sage/sage.graphs.graph.tex:sage: g = networkx.XDiGraph({0:[1,2,3], 2:[4]}) | /usr/share/doc/sagemath/doc-main/ref/sage/sage.graphs.graph.tex:sage: g = networkx.XDiGraph({0:[1,2,3], 2:[4]}) | /usr/share/doc/sagemath/doc-main/ref/sage/sage.graphs.graph.tex:sage: g = networkx.DiGraph({0:[1,2,3], 2:[4]}) `--- -- System Information: Debian Release: squeeze/sid APT prefers unstable APT policy: (901, 'unstable'), (900, 'testing'), (300, 'experimental') Architecture: amd64 (x86_64) Kernel: Linux 2.6.31-1-amd64 (SMP w/2 CPU cores) Locale: LANG=en_US, LC_CTYPE=en_US.UTF-8 (charmap=UTF-8) Shell: /bin/sh linked to /bin/bash Versions of packages sagemath depends on: ii cython 0.11.2-1 C-Extensions for Python ii gap 4r4p12-1 Groups, Algorithms and Programming ii gap-guava 3.6-2 Coding theory library for GAP ii genus2reduction 0.3-2 Conductor and Reduction Types for ii gfan 0.3dfsg-1 Program for computing with Groebne ii gfortran 4:4.3.3-9 The GNU Fortran 95 compiler ii gmp-ecm 6.2-1 Factor integers using the Elliptic ii ipython 0.10-1 enhanced interactive Python shell ii lcalc 0.0.20080205-1 a program for calculating with L-f ii libatlas3gf-bas 3.6.0-24 Automatically Tuned Linear Algebra ii libc6 2.10.2-5 Embedded GNU C Library: Shared lib ii libcdd-test 094b.dfsg-4 Test programs for libcdd-dev ii libecm0 6.2-1 Factor integers using the Elliptic ii libflint-1.011 1.011-2 C library for number theory, share ii libfplll0 2.1.6+20071129-2 A library for LLL-reduction of Euc ii libgcc1 1:4.4.2-2 GCC support library ii libgivaro0 3.2.13-1 library for arithmetic and algebra ii libgmp3c2 2:4.3.1+dfsg-3 Multiprecision arithmetic library ii libgmpxx4ldbl 2:4.3.1+dfsg-3 Multiprecision arithmetic library ii libgsl0ldbl 1.13+dfsg-1 GNU Scientific Library (GSL) -- li ii libiml0 1.0.3-4 Integer Matrix Library, runtime fi ii libjs-jquery 1.3.3-2 JavaScript library for dynamic web ii liblinbox0 1.1.6~rc0-4 Library for exact linear algebra, ii libm4ri-0.0.200 0.0.20080521-2 Method of the Four Russians Invers ii libmpfi0 1.3.4~rc4~cvs20080519-1 multiple precision floating-point ii libmpfr1ldbl 2.4.2-1 multiple precision floating-point ii libntl-5.4.2 5.4.2-4 Number Theory Library, shared libr ii libpari2-gmp 2.3.4-2 PARI/GP Computer Algebra System sh ii libpolybori-0.5 0.5~rc1-2 Polynomials over Boolean Rings, sh ii libqd2c2a 2.3.7-2+b1 Double-double and quad double type ii libreadline5 5.2-6 GNU readline and history libraries ii libsingular-3-0 3-0-4-3.dfsg-2 Library for commutative algebra, s ii libsingular-dev 3-0-4-3.dfsg-2 Library for commutative algebra, d ii libstdc++6 4.4.2-2 The GNU Standard C++ Library v3 ii libsymmetrica-2 2.0-1 A library for combinatorics, share ii libzn-poly-0.8 0.8-1 A library for polynomial arithmeti ii maxima-share 5.17.1-1 A computer algebra system -- extra ii mercurial 1.3.1-1 scalable distributed version contr ii palp 1.1-1 A Package for Analyzing Lattice Po ii pari-extra 2.1-1 PARI/GP Computer Algebra System ex ii pari-gp 2.3.4-2 PARI/GP Computer Algebra System bi ii python 2.5.4-8 An interactive high-level object-o ii python-central 0.6.11 register and build utility for Pyt ii python-crypto 2.0.1+dfsg1-4 cryptographic algorithms and proto ii python-cvxopt 1.1-1 Python package for convex optimiza ii python-gd 0.52debian-3.1 Python module wrapper for libgd ii python-gnutls 1.1.9-1 Python wrapper for the GNUTLS libr ii python-matplotl 0.99.1.2-2 Python based plotting system in a ii python-moinmoin 1.8.5-1 Python clone of WikiWiki - library ii python-networkx 0.99-2 tool to manipulate and study more ii python-numpy 1:1.3.0-3+b1 Numerical Python adds a fast array ii python-pexpect 2.3-1 Python module for automating inter ii python-polybori 0.5~rc1-2 Polynomials over Boolean Rings, Py ii python-processi 0.52-2 library for running multiple Pytho ii python-rpy 1.0.3-13.1~yarikverbose1 Python interface to the GNU R lang ii python-scipy 0.7.0-2+b1 scientific tools for Python ii python-sqlalche 0.5.6-1 SQL toolkit and Object Relational ii python-sympy 0.6.4-1 Computer Algebra System (CAS) in P ii python-twisted 8.2.0-3 Event-based framework for internet ii python-twisted- 8.1.0-2 An HTTP/1.1 Server Framework ii python-zodb 1:3.6.0-4 set of tools for using the Zope Ob ii python2.5 2.5.4-3 An interactive high-level object-o ii r-base 2.9.0-4 GNU R statistical computation and ii scons 1.2.0.d20090905-1 replacement for make ii singular 3-0-4-3.dfsg-2 A commutative algebra system ii sqlite3 3.6.14.2-1 A command line interface for SQLit ii sympow 1.019-4 Special values of symmetric power ii tachyon 0.98~beta.dfsg-1 Parallel/Multiprocessor Ray Tracin ii time 1.7-23 The GNU time program for measuring Versions of packages sagemath recommends: ii gap-character-tables 1r1p3-5 GAP Library of character tables ii imagemagick 7:6.5.5.3-1 image manipulation programs ii python-gnuplot 1.8-1 A Python interface to the gnuplot ii python-openssl 0.9-1 Python wrapper around the OpenSSL ii r-recommended 2.9.0-4 GNU R collection of recommended pa Versions of packages sagemath suggests: ii gdb 6.8.50.20090628-3+b1 The GNU Debugger ii valgrind 1:3.5.0-3 A memory debugger and profiler -- debconf-show failed -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of "unsubscribe". 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