Package: python-scipy Version: 0.5.1-3 Severity: normal -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA1
When running scipy's tests as recommended by the tutorial at <http://www.scipy.org/FAQ#head-75a5d2cc3678224d8e72fb4f58aa0f0639428722>, I get the following output: In [5]: scipy.test(level=1) Found 4 tests for scipy.linsolve.umfpack.umfpack Found 4 tests for scipy.io.array_import Found 128 tests for scipy.linalg.fblas Found 397 tests for scipy.ndimage Found 10 tests for scipy.integrate.quadpack Found 97 tests for scipy.stats.stats Found 47 tests for scipy.linalg.decomp Found 2 tests for scipy.integrate.quadrature Found 95 tests for scipy.sparse.sparse Found 20 tests for scipy.fftpack.pseudo_diffs Found 6 tests for scipy.optimize.optimize Found 5 tests for scipy.interpolate.fitpack Found 1 tests for scipy.interpolate Found 70 tests for scipy.stats.distributions Found 12 tests for scipy.io.mmio Found 10 tests for scipy.stats.morestats Found 4 tests for scipy.linalg.lapack Found 18 tests for scipy.fftpack.basic Found 4 tests for scipy.optimize.zeros Found 17 tests for scipy.io.mio Found 4 tests for scipy.fftpack.helper **************************************************************** WARNING: clapack module is empty - ----------- See scipy/INSTALL.txt for troubleshooting. Notes: * If atlas library is not found by numpy/distutils/system_info.py, then scipy uses flapack instead of clapack. **************************************************************** Found 42 tests for scipy.lib.lapack Found 2 tests for scipy.maxentropy.maxentropy Found 358 tests for scipy.special.basic Found 128 tests for scipy.lib.blas.fblas Found 7 tests for scipy.linalg.matfuncs Found 41 tests for scipy.linalg.basic Found 1 tests for scipy.optimize.cobyla Found 16 tests for scipy.lib.blas Found 1 tests for scipy.integrate Found 14 tests for scipy.linalg.blas Found 4 tests for scipy.signal.signaltools Found 0 tests for __main__ swig/python detected a memory leak of type 'void *', no destructor found. swig/python detected a memory leak of type 'void *', no destructor found. .data-ftype: c compared to data F Calling _superlu.cgssv Use minimum degree ordering on A'+A. .swig/python detected a memory leak of type 'void *', no destructor found. swig/python detected a memory leak of type 'void *', no destructor found. .data-ftype: s compared to data f Calling _superlu.sgssv Use minimum degree ordering on A'+A. . Don't worry about a warning regarding the number of bytes read. Warning: 1000000 bytes requested, 20 bytes read. .......caxpy:n=4 ..caxpy:n=3 ....ccopy:n=4 ..ccopy:n=3 .............cscal:n=4 ....cswap:n=4 ..cswap:n=3 .....daxpy:n=4 ..daxpy:n=3 ....dcopy:n=4 ..dcopy:n=3 .............dscal:n=4 ....dswap:n=4 ..dswap:n=3 .....saxpy:n=4 ..saxpy:n=3 ....scopy:n=4 ..scopy:n=3 .............sscal:n=4 ....sswap:n=4 ..sswap:n=3 .....zaxpy:n=4 ..zaxpy:n=3 ....zcopy:n=4 ..zcopy:n=3 .............zscal:n=4 ....zswap:n=4 ..zswap:n=3 .........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................Took 13 points. ..........Resizing... 16 17 24 Resizing... 20 7 35 Resizing... 23 7 47 Resizing... 24 25 58 Resizing... 28 7 68 Resizing... 28 27 73 .....Use minimum degree ordering on A'+A. ........................Use minimum degree ordering on A'+A. ...................Resizing... 16 17 24 Resizing... 20 7 35 Resizing... 23 7 47 Resizing... 24 25 58 Resizing... 28 7 68 Resizing... 28 27 73 .....Use minimum degree ordering on A'+A. .................Resizing... 16 17 24 Resizing... 20 7 35 Resizing... 23 7 47 Resizing... 24 25 58 Resizing... 28 7 68 Resizing... 28 27 73 .....Use minimum degree ordering on A'+A. ....................................../usr/lib/python2.4/site-packages/scipy/interpolate/fitpack2.py:410: UserWarning: The coefficients of the spline returned have been computed as the minimal norm least-squares solution of a (numerically) rank deficient system (deficiency=7). If deficiency is large, the results may be inaccurate. Deficiency may strongly depend on the value of eps. warnings.warn(message) ..................................................................F.......................Ties preclude use of exact statistic. ..Ties preclude use of exact statistic. ........ **************************************************************** WARNING: clapack module is empty - ----------- See scipy/INSTALL.txt for troubleshooting. Notes: * If atlas library is not found by numpy/distutils/system_info.py, then scipy uses flapack instead of clapack. **************************************************************** ..........................E.......................................................................................................................................................................................................................................................................................................................................................................................................................................caxpy:n=4 ..caxpy:n=3 ....ccopy:n=4 ..ccopy:n=3 .............cscal:n=4 ....cswap:n=4 ..cswap:n=3 .....daxpy:n=4 ..daxpy:n=3 ....dcopy:n=4 ..dcopy:n=3 .............dscal:n=4 ....dswap:n=4 ..dswap:n=3 .....saxpy:n=4 ..saxpy:n=3 ....scopy:n=4 ..scopy:n=3 .............sscal:n=4 ....sswap:n=4 ..sswap:n=3 .....zaxpy:n=4 ..zaxpy:n=3 ....zcopy:n=4 ..zcopy:n=3 .............zscal:n=4 ....zswap:n=4 ..zswap:n=3 ...Result may be inaccurate, approximate err = 4.53219545974e-09 ...Result may be inaccurate, approximate err = 7.27595761418e-12 .............................................................Residual: 1.05006950608e-07 . **************************************************************** WARNING: cblas module is empty - ----------- See scipy/INSTALL.txt for troubleshooting. Notes: * If atlas library is not found by numpy/distutils/system_info.py, then scipy uses fblas instead of cblas. **************************************************************** .................. ====================================================================== ERROR: check loadmat case cellnest - ---------------------------------------------------------------------- Traceback (most recent call last): File "/usr/lib/python2.4/site-packages/scipy/io/tests/test_mio.py", line 80, in cc self._check_case(name, expected) File "/usr/lib/python2.4/site-packages/scipy/io/tests/test_mio.py", line 75, in _check_case self._check_level(k_label, expected, matdict[k]) File "/usr/lib/python2.4/site-packages/scipy/io/tests/test_mio.py", line 33, in _check_level self._check_level(level_label, ev, actual[i]) File "/usr/lib/python2.4/site-packages/scipy/io/tests/test_mio.py", line 33, in _check_level self._check_level(level_label, ev, actual[i]) File "/usr/lib/python2.4/site-packages/scipy/io/tests/test_mio.py", line 33, in _check_level self._check_level(level_label, ev, actual[i]) File "/usr/lib/python2.4/site-packages/scipy/io/tests/test_mio.py", line 30, in _check_level assert len(expected) == len(actual), "Different list lengths at %s" % label TypeError: len() of unsized object ====================================================================== FAIL: check_rvs (scipy.stats.tests.test_distributions.test_randint) - ---------------------------------------------------------------------- Traceback (most recent call last): File "/usr/lib/python2.4/site-packages/scipy/stats/tests/test_distributions.py", line 84, in check_rvs assert isinstance(val, numpy.ScalarType),`type(val)` AssertionError: <type 'numpy.ndarray'> - ---------------------------------------------------------------------- Ran 1569 tests in 6.013s FAILED (failures=1, errors=1) - -- System Information: Debian Release: 4.0 APT prefers testing APT policy: (530, 'testing'), (520, 'unstable'), (510, 'experimental') Architecture: i386 (i686) Shell: /bin/sh linked to /bin/bash Kernel: Linux 2.6.18-3-k7 Locale: LANG=en_GB.UTF-8, LC_CTYPE=en_GB.UTF-8 (charmap=UTF-8) Versions of packages python-scipy depends on: ii atlas3-base [liblapack.s 3.6.0-20.2 Automatically Tuned Linear Algebra ii fftw2 2.1.3-20 library for computing Fast Fourier ii lapack3 [liblapack.so.3] 3.0.20000531a-6 library of linear algebra routines ii libc6 2.3.6.ds1-8 GNU C Library: Shared libraries ii libg2c0 1:3.4.6-4 Runtime library for GNU Fortran 77 ii libgcc1 1:4.1.1-19 GCC support library ii libstdc++6 4.1.1-19 The GNU Standard C++ Library v3 ii libufsparse 1.2-7 collection of libraries for comput ii python 2.4.4-2 An interactive high-level object-o ii python-central 0.5.12 register and build utility for Pyt ii python-numpy 1:1.0rc1-1 Numerical Python adds a fast array ii python-numpy-ext 1:1.0rc1-1 Numerical Python adds a fast array Versions of packages python-scipy recommends: ii g++ [c++-compiler] 4:4.1.1-13 The GNU C++ compiler ii g++-3.4 [c++-compiler] 3.4.6-4 The GNU C++ compiler ii g++-4.1 [c++-compiler] 4.1.1-19 The GNU C++ compiler - -- no debconf information -----BEGIN PGP SIGNATURE----- Version: GnuPG v1.4.6 (GNU/Linux) iD8DBQFFizClshl/216gEHgRAoWdAJwMez/5CnuJzL5F5hJQjqMxn865owCgoj50 Vx21pcZmHOOg4nSEp7rytf4= =F+Sp -----END PGP SIGNATURE----- -- To UNSUBSCRIBE, email to [EMAIL PROTECTED] with a subject of "unsubscribe". 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